Gene detail

Detailed information of KAJ8418801.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8418801.1	ENDONUCLEASE RELATED	AAFF_1.1_unplaced_1	11365445	11374553	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00003000

GCCATGTGCAGGCAAGGTCAGGAAAAGAAACTGAAATTGAAGTCACATTTTGGCTTTTGAAAAACTTGTGTAATTAAGTTATAAAAATGAAGTTGCATCTGAAATCTCTTCGTTTCCTTGGTGGATTTGCTTGTGGGGCAGCTGTAAGCACTGCATCATGTATTGCAGCGatggaaatgtacaaaaaacagacactgcCGGATACGAGAGAAGAAACGGTAGATCCATCTGGTGGAATTATGGGACGATATGGCTTCCCATTGACGGGTGCTGAAATAAGATACTATGCCAATCATACGCTGTCATATGACCAGGCCAGACGAACTCCAAGATGGGTTGTAGAGCATATATCGAGTGAGAAATTATTAGGGAATGCAGAGCGAAAGCGTTGCAGGTTTAGGCCAGATCCTAATGTCCCTGTGATCTTCAGCGCACACAATGAGGATTACCTTGGCAGCGGCTGGTCCAGAGGCCACATGGTCCCTGCAGGGGACAACAAATTTTCTGAGCAAGCCATGGCTGAGACCTTTTACCTGTCGAACATTGTGCCACAGAACCTTGAAAATAATGCTGGCttctggaacagACTGGAAATGTATTGTAGAGACCTGACAAAAAGATTTCAAGATGTGTGGATCATTACAGGGCCTCTAATCCTGCCTGAAGTGGGGGCtgatgggaaaaaaatcatctCATACAAGGTCATTGGGAAAGACGATGTAGCTGTCCCCACTCACCTCTATAAAGTCATCCTCGCTCAGAGAAAAGGCTTCCCATCAGAGACACTGGCTTTAGCAGCCTTTGTGGTACCCAACCGCCCCATCGGGTTCGATCACCCCCTGACTGAGTTCCAGGTAAGTCTGGTGGACCTGGAGAAGATGTCAGGGCTGACCTTTTTTCCCAAAGTGGACCGGACCCGTGTCCCCATCCAGAACCTCTGTAACCTGGACTCCTGCAAGCTACTGAGTTCACAGCAGTTCCACCTGTACATCACGACCCGCAAGGTTGGCAGCGCTGGAAACATTTTCAAACTGGATAAGGCGATGTCGGAGTTGAAGGAGGCTGGCATTGCCCCAGATAGCTACCTGCTCAAGCTCTACGCCGATAAGAGGAAAGAGCTTGAATCCAAAGAAGTTTCGGGCAACACCAGAGGACATTGatgtaaattgaaagaaatcgGTTGAATTGGTTGAGGAGATTCAGTAGTCTTACATTTAGATGGTGGGTGTGATGTTGCATGTATTGGCATTtgccaatatttttttttttttcttctattttggGCTTTAATTATGAAACATGAGGATACCCTTTTTTGGCTTAAAGGAGCACAAATGGTTGTTATGTCATTTTTTGAGTGTTACCAGTAACTATAAAACTGGATGTAATTAATTTGGAACAGTGCAACTTTTATTTGGCTTTTACATGAATGTAGTTGTTAAtgtctatttattttgtgatatttaaaatgatttattaacaaactacTGAATGTGTTTGTCACATATGGTACCTCTACACATCACCTCCTATACAAATTTGCctgtcagaaacaaaatgtttttagtttttttattgcaatttgATTTTGATGTTTTGTGGTTTTCTGTCATATCATCCAGCAATAAGTATGAATGATTGCACACCACTGCCACAGACTGCTCTATTTCCAAAATACCACAGGCTCTTTTGTATGCCAGTTCCATTAAAGCACATATGATTCATGCATTTTTCCAGTAGTGGTGCACATTATGGTTCTGTATTTGTGTGGAGTATTAACTTGGACAGTGGACTCCGATGGTAGTGGAAACACATCCATTCTCAGTTCTGGGCACCCTTTCCACAGTAAGAATTCACAgcactgaaataaatatataatggaAATGAATAATAGcattttttttgaacaagtggAGTGACTTTTCACCCTGGGAGGCAAACACCATTTTAACCTTTTAAGCTACCATTAACGACATGGTTGGAGGGAGAAAACAGTGGGCTGTGCTTGCTT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01223	Endonuclease_NS	DNA/RNA non-specific endonuclease	Domain	Interproscan
PF18026	Exog_C	Endo/exonuclease (EXOG) C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001604	Domain	DNA/RNA non-specific endonuclease	Interproscan
IPR020821	Domain	Extracellular Endonuclease, subunit A	Interproscan
IPR040255	Family	Non-specific endonuclease	Interproscan
IPR041003	Domain	EXOG, C-terminal	Interproscan
IPR044925	Homologous_superfamily	His-Me finger superfamily	Interproscan
IPR044929	Homologous_superfamily	DNA/RNA non-specific endonuclease superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13966	ENDONUCLEASE RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000014	Molecular Function	single-stranded DNA endodeoxyribonuclease activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004519	Molecular Function	endonuclease activity	Interproscan
GO:0004521	Molecular Function	RNA endonuclease activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005743	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0006309	Biological Process	apoptotic DNA fragmentation	Interproscan
GO:0008409	Molecular Function	5'-3' exonuclease activity	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-