Gene detail

Detailed information of KAJ8418709.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8418709.1	-	AAFF_1.1_unplaced_1	7309613	7325950	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00002080

GGACAGAaatcagagagggagggattatgATTGTATACAGCGCTGCCACTTCAAACATCTTAGCTAAATCACAAGCCGGCTAGTGAACTTTGTACCACTGACCTCTATGACATGGCTGTTCCGCTTTCCCTGTTTTCTCCGTGGCGATTTGTCAGATCTACCAGACTGATAAAAGGGTTACGGATCCCTGCCCTCCAGCTGCACACAACTGGGTCAGTGATGGGGGTTACGGTAGAGGATTTCAACCATGCCAAAGCCCAACTCAACACACTGAAGAAGGATCCAGGCAATGAGGTCAAGCTCAAGATCTATGCCCTCTTCAAACAGGCTACTCAGGGTCCCTGTAGCACCCCCAAGCCAGGTATGCTGGACTTCGTCAACAAGGTCAAGTGGGATGCATGGAAGTCCCTAGGTAGCGTGTCACAGGACGAGGCCAGACAGGAGTATGTGGACCTAATCTCTTCCCTGGTGGGTGCCGAGGGACCTGCCCAGGCCACAGCAAAGCCTTCTGGAAGCTCTGCTGCCTACGAGACGCTGCTGGTGACTACAGAGGACAACATCACCACCATTCTCCTCAATCGGCCCACGAAAAAGAACGCCATCACGGTGGAGATGTACAATGAGATTGTCAAGGCTCTGGAGCTTGCAGGAAAGGATGATTCGGTCATCACTGTACTCACAGGTAGTGGAGATTTCTACTGCAGCGGCAATGATTTGAACAACTTCACAAAAATTCCAGATGGCGGGATTGAAAAGATGGCCAAAGACTCTGGAGAATTGCTTAGGGGGTTTGTGAAAGCCTTCATCGACTTCCCTAAGCCCCTGATCGGCGTGATCAATGGGCCAGCTGTTGGAGTCTCCGTCACGCTCCTTGGACTCTTTGATGTGGTCTATGCAACAGAAAGGGCAACATTCCACACCCCCTTCAGCCAGTTGGGACAAAGCCCCGAAGGCTGCTCCTCCTACACCTTCCCTAAGATGATGGGAACGGCCAAGgctGGTGAGATGCTGCTGTTCAATAAGAAGTTGACAGCCAACGAGGCGTGCCAGAGGGGCCTGGTCACTGAGGTCTTCCCTGACAGCAGCTTCCAGACTGAAGTGCGCACAAGGCTCAAGGCCTACGCCCAGCTGCCCAGGAACTCTCTGGCGCTGTCTAAGCAGCTTGTGCGGGCGGTGGACAAGGAGCGGCTGCACGCAGCCAACAACCAGGAGGTGGAGCGGCTGATGGAGCGCTGGCTGTCGGAAGAGTGCATGAATGCCATCATGAGCTTCTTTCAGGCCAGGGCCCGGCTGTGAGACCCAGCCCTGCCCTAGGAGCTGCTGCCCTTGGGGCTTGACACCCTCTTCCACCCACCGACAAATGTAGTCTTTGCCAGTTCACGGTACTAACAACTAACTTAGAGGATGCCCTCAAAGTCcgattttttattgtttttaattaattggcTCCTCAACCTAATTCCATATTGTTGGTGTCATGGCAGAACTTTGTATGTCCcattttgtttcccattttggttgttttacCCTTTCTGTGTTCACAGGGTTTTCTGTCTTCACCACCTCCATTTGATCATATGCATGTTGCAAATAGACATACAAGATTTTGTTTGCAGTGTCGAACATATGCTTTTTAAGTTTGAATTGTTTTAGACCGTTTGAAATACATTCATGAAAATACTACAACTGATAATGATATTGTAATATATAGAAATGATTTTACCAGAGGTGACAGATGATTGCTTTAAAGCAAAAGGTTTTTATATATCTCCAAAACTATcatgtgaataatttttatgATTCACACCAGTGGTGCCATTATATGGAGAACACTAGTTACTCGACACTAACTGTGGTCTCCTGTTTTTGACTCTTGACAAGTAAGGACAGATGAACTGCTCCTATTTTATACAGTACCTGTTTTACTCCAGAACTGAGCATATCAAGTACTAACTGTTCTGGGGGAACAAAATGAAGCTGTTAATATATCCCTCCCCAGTCAGGACAGTCTCaatccagtggttctcaatcctggtcctggagggccacagggtatgctggtttcaTTCTTACTcagcatttaattgatcaattcaagtggttgattacataattaaaatacctcatctggtttcttggctttaaattggttgctgattttaaggtgaaaacaaaaaacaatacccTGCCGCTCTCCAGacccaggattgagaaccccaATGTTCTAATCTATCTCTTTAGTGTCCTTTTTGTGTCTGGAGTTGCTTTACTGGGCAGTTAATACGTTTCTCTCTTGCTTAAGGGATGTGTTCCTCGGTAGATTGTATCATAATAAATGTacttgtgggttgtgggttcagaaTCAGTACAAGTGAAGTGTGGTTTGTCATGtcaatgggtgtgtccattgcCAGCACAGTAGGCCTTTAAATTAAAGcaatctgttaaaaaaaa

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00378	ECH_1	Enoyl-CoA hydratase/isomerase	Domain	Interproscan
PF00887	ACBP	Acyl CoA binding protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000582	Domain	Acyl-CoA-binding protein, ACBP	Interproscan
IPR001753	Family	Enoyl-CoA hydratase/isomerase	Interproscan
IPR014352	Homologous_superfamily	FERM/acyl-CoA-binding protein superfamily	Interproscan
IPR014748	Homologous_superfamily	Enoyl-CoA hydratase, C-terminal	Interproscan
IPR022408	Conserved_site	Acyl-CoA-binding protein, ACBP, conserved site	Interproscan
IPR029045	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan
IPR035984	Homologous_superfamily	Acyl-CoA binding protein superfamily	Interproscan
IPR051053	Family	Enoyl-CoA hydratase/isomerase and chromodomain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43684	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000062	Molecular Function	fatty-acyl-CoA binding	Interproscan
GO:0004165	Molecular Function	delta(3)-delta(2)-enoyl-CoA isomerase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0005777	Cellular Component	peroxisome	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-