Gene detail

Detailed information of KAJ8418642.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8418642.1	SH2 DOMAIN-CONTAINING PROTEIN	AAFF_1.1_unplaced_1	4591754	4622143	+

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00001410

ATGGCAAACCAACAGTCTTGGTACCATGGCAATATTACGCGTTCCAAAGCCGAGGACCTGCTTTCAAAGGCAGCAAAAGATGGAAGCTTTCTGCTACGAGACAGCGAATCGATACCAGGAGCCTATGCCCTCTGTGTGCTgTATCAAAACTGTGTGTACACTTACAGAATCTTGCCAAATGAAGAGAAGAAACTCTCTGTGCAGGCCTCAGAGGGCGTGCCCATCCGCTTCTTCTCAGTGATAGCAGACCTTGTAGAGGAGTACCACAAAGAGAATTTGGGGCTGGTGACACACCTGCAGTTCGCAGTGCAGaaggaggaagagacagaggaggagtcAGAGTCAATCAAAGTGCCTCCTCAGCTACCACCGAGAAATCCCAGTGGTTCATCAGCAGTAAACGATGCCAAAGACCCTCATGGTGACTCTTCAAAGGCTTCTGAGCTCGTCCTAGCCTCCATTTCTGACACTTTGATGCAGAGACTGCAGCACATAGACACATCTAATGTCCAAGAAGATCACCTAAAATCCATCCAGGACTACATCTGCAATTTTGTTAGTCTCGATGCAGAACAAGTACAGAATGGCAATCCTAATCTCCCACATCTGAAAAAGTTAACTCTTGGTATCTGCAAGAATTTAACCAGTGAAATTTCCCGTACCTTACCTACACTGGAGGCTTTTCAGAAAGTACTGGACCAACAGCACTCACCTGTAGCTGGACGTCTAAGGAGTCAGGTTTCTGCTGAGTCAGGTTTATATGTGACTTTCAGACTGGAGCAGCTGACTAAGCTTCTCTATTCAATAGAAGAAAAGgtgaaaaatgttgtgttcgaTTCAGTTTATTCTGATGGCGGCCACAGAAAATCACTCATACCACCTGTAACCTTTGAAGTCAAATCAGATATCCTGAGCATTCCAACCAAATCATACCTCAAGGTGGATGTGGAAAGTGGAAGGGTGTATTTCAAGAAATCCAAAGATGGATCAGAGGACAAATGCTTTTGCACAACAAAACTGGTGAAGTCACAGAAGGTACACAGCAAGCTGGTGATAGTGGtggagacagagaaggagaagaCACAGAGGAAGGAGTATGTCTTTGATGACTCAAAGaaAAGAGAGGGGTTTTGCCAGCTCCTGCagcagatgaaaaataaacactcaGACAAGCCTGAACCTGATATGATCACCATCTTCATAGGCACCTGGAACATGGGAAATGCTGGTCCCCCGCACAATATTACTTCCTGGTTCCAGTCAAAGGGCCAGGGGAAGACTCGGGATGACACTGCAGACCATATACCTCATGACATCTATGTCATTGGGACTCAGGAGGACCCCCTGGGAGAAAGGGAGTGGATTGAAGTCCTTAAAGGCACCCTGAGGGACATCACTAATATCAGCTTCAAACAAGTAGCCACTCACACACTGTGGAACATTCGTATTGTGGTGCTGGCCAAGCCAGAGCACGAGAATCGCATCTCACACATCTTCTCCAACAGTGTGAAGACAGGAATCGCCAATGCTCTGGGAAATAAAGGAGCAGTTGGTGTGTCCTTCATGTTCAATGGTACATCCTTTGGATTTGTCAACAGTCATCTGACTTCTGGGAGTGAAAAGAAACATAGACGGAACCAGAACTACATCAGCATTCTACGCTTTTTGAACCTTGGCGATAAGAAATTAAATCCGTTTGACATCACACATCGATTCACCCACCTCTTCTGGTTGGGAGATTTGAATTATCGTATTGAGTTACCCCCAACAGAAGCAGAGAACATTGTGACAAAGATCAAGCAGCAGCAGTATCAGGAACTCCTGAACCGAGACCAGCTCACCatggagaggggagaagagaaAGTCTTCTTGCATTATGAGGAAGAAGAGATCACATTCGCCCCCACCTACCGATTCGAAAGAGACACACGTGACAAGTATGCCTACACAAAAGCAAAGGCCACGGGGACTAAGTATAACCTTCCTTCCTGGTGTGACCGTGTCCTGCGCAAGTCCTACCCCCTCGTGCATGTTTTTTGTCAATCGTACGGGTGCACCAATGACATCATGACAAGTGACCACTCTCCTGTATTTGCTACATTTGAAGTGGGCGTGACATCACAGTTTGTTTCAAAAAATAaTCCAAACAGCGTGTCTCAGGGTGGAATTAAATTCATGAACTGCGTGGCCGTTCTTATGACCAAGTCCAAGACGAGGTTCTTCATTGAGTACCACTCCAGCTGTCTGGAGAGTTCCGTCAAGAGTTCTGAAGGAGAGAACCAAGAGAGCAAAGAGGGGTCAATAAAAGTTCGATTTGGAGCACAGGTTGAGCTCACTCCCATCATTTTGGACCCAGAGTACCTCTTGGATCAGCACATCCTCATTAGTGTGAAGTCCACTGACAGTGACGAGTCGTATGGCGAGAGCTGTGTGGCTCTGCGAGCGGCCGAGTCGTCCTACACGGAGTTCCACGTGACGCTGACGCACCACGGGGAGCGGACGGGCGTGCTCTCTGGGGGCGTCCAAGTGCGCACCTCGGGGGGCAAGCAGACAGAGAAGCTATACGatTTCATCAAGGTGGAAAGGGATGATTCAGGAGGTCAAAAGGGCAAAAGTGGAGAATACTCCAACAAGCCTGCTCTTCCCTTCCACTCTGACTTCAGTAACCCAAATTACATGGGGGTGGGTTTTAAGACTGGGGGGCATTCTGGCTGGAGCTACAGCATGCCTCCAAAGCCAAGCCCTCCTCCAGGGCACATGGGCAAGGACATGACCCCAGGTAACCTCTCTCCAAAAAAGACTGGTCACGACCTGGCTGTCCGCAGTCTATCAGGAAATGTACCTGAGGATGGGACGCCCGCTGAGATGTTTGATAACCCTCTCTATGGCTCCAGGACCATGTCAAAGGTCGCAACGCGAAGCAAGGAGCAGGACTCCATGCGCAAGGATCATCTCTCTCCGCCCGAGCCTTTCTTTGCCTTCCCTAAGCCACCTGATCCGGAGGCTGAGCGCCTGCCCCCAGTCCCGACACCCCGAATGCGCTCCTACACCTGCAGCGAGACCAAGCCTCAgggtcctccctctctccagcccCCCGGCTTCACCAAAAAGCCGGTGATGCCGTCACGCTCCGAAGCGGGCATTACGCCAGCCAATAAGCCTCCTTTGCCGGTGAAGTTCCGTCAAGGGGACCCACAACCCACAATCaagcccagggactacagagaCAGCTCTGAGCTCCCCAACAAGGCCAGGGTCCCTGCAAGACCCATACAGCCTCTCCCTAAAGATGTGCATCACGAAGCGTGTGGAAAGATGGGAAGCTCAgtgaaatga

Transcript

AAFF_T00001410

gagaaagagtaagagagagagaccgatcAAGATGAATTCGACCAGCAAGCCGATCTGAATTTCCACTGACGTGTTTCCGTATATTTTGAAAGCAAATGCAAAATAGCGAATAGAACTCCCTAAAAGAGGAGTCTCACACGGGTCAGTGGCTGGAATGGCAAACCAACAGTCTTGGTACCATGGCAATATTACGCGTTCCAAAGCCGAGGACCTGCTTTCAAAGGCAGCAAAAGATGGAAGCTTTCTGCTACGAGACAGCGAATCGATACCAGGAGCCTATGCCCTCTGTGTGCTgTATCAAAACTGTGTGTACACTTACAGAATCTTGCCAAATGAAGAGAAGAAACTCTCTGTGCAGGCCTCAGAGGGCGTGCCCATCCGCTTCTTCTCAGTGATAGCAGACCTTGTAGAGGAGTACCACAAAGAGAATTTGGGGCTGGTGACACACCTGCAGTTCGCAGTGCAGaaggaggaagagacagaggaggagtcAGAGTCAATCAAAGTGCCTCCTCAGCTACCACCGAGAAATCCCAGTGGTTCATCAGCAGTAAACGATGCCAAAGACCCTCATGGTGACTCTTCAAAGGCTTCTGAGCTCGTCCTAGCCTCCATTTCTGACACTTTGATGCAGAGACTGCAGCACATAGACACATCTAATGTCCAAGAAGATCACCTAAAATCCATCCAGGACTACATCTGCAATTTTGTTAGTCTCGATGCAGAACAAGTACAGAATGGCAATCCTAATCTCCCACATCTGAAAAAGTTAACTCTTGGTATCTGCAAGAATTTAACCAGTGAAATTTCCCGTACCTTACCTACACTGGAGGCTTTTCAGAAAGTACTGGACCAACAGCACTCACCTGTAGCTGGACGTCTAAGGAGTCAGGTTTCTGCTGAGTCAGGTTTATATGTGACTTTCAGACTGGAGCAGCTGACTAAGCTTCTCTATTCAATAGAAGAAAAGgtgaaaaatgttgtgttcgaTTCAGTTTATTCTGATGGCGGCCACAGAAAATCACTCATACCACCTGTAACCTTTGAAGTCAAATCAGATATCCTGAGCATTCCAACCAAATCATACCTCAAGGTGGATGTGGAAAGTGGAAGGGTGTATTTCAAGAAATCCAAAGATGGATCAGAGGACAAATGCTTTTGCACAACAAAACTGGTGAAGTCACAGAAGGTACACAGCAAGCTGGTGATAGTGGtggagacagagaaggagaagaCACAGAGGAAGGAGTATGTCTTTGATGACTCAAAGaaAAGAGAGGGGTTTTGCCAGCTCCTGCagcagatgaaaaataaacactcaGACAAGCCTGAACCTGATATGATCACCATCTTCATAGGCACCTGGAACATGGGAAATGCTGGTCCCCCGCACAATATTACTTCCTGGTTCCAGTCAAAGGGCCAGGGGAAGACTCGGGATGACACTGCAGACCATATACCTCATGACATCTATGTCATTGGGACTCAGGAGGACCCCCTGGGAGAAAGGGAGTGGATTGAAGTCCTTAAAGGCACCCTGAGGGACATCACTAATATCAGCTTCAAACAAGTAGCCACTCACACACTGTGGAACATTCGTATTGTGGTGCTGGCCAAGCCAGAGCACGAGAATCGCATCTCACACATCTTCTCCAACAGTGTGAAGACAGGAATCGCCAATGCTCTGGGAAATAAAGGAGCAGTTGGTGTGTCCTTCATGTTCAATGGTACATCCTTTGGATTTGTCAACAGTCATCTGACTTCTGGGAGTGAAAAGAAACATAGACGGAACCAGAACTACATCAGCATTCTACGCTTTTTGAACCTTGGCGATAAGAAATTAAATCCGTTTGACATCACACATCGATTCACCCACCTCTTCTGGTTGGGAGATTTGAATTATCGTATTGAGTTACCCCCAACAGAAGCAGAGAACATTGTGACAAAGATCAAGCAGCAGCAGTATCAGGAACTCCTGAACCGAGACCAGCTCACCatggagaggggagaagagaaAGTCTTCTTGCATTATGAGGAAGAAGAGATCACATTCGCCCCCACCTACCGATTCGAAAGAGACACACGTGACAAGTATGCCTACACAAAAGCAAAGGCCACGGGGACTAAGTATAACCTTCCTTCCTGGTGTGACCGTGTCCTGCGCAAGTCCTACCCCCTCGTGCATGTTTTTTGTCAATCGTACGGGTGCACCAATGACATCATGACAAGTGACCACTCTCCTGTATTTGCTACATTTGAAGTGGGCGTGACATCACAGTTTGTTTCAAAAAATAaTCCAAACAGCGTGTCTCAGGGTGGAATTAAATTCATGAACTGCGTGGCCGTTCTTATGACCAAGTCCAAGACGAGGTTCTTCATTGAGTACCACTCCAGCTGTCTGGAGAGTTCCGTCAAGAGTTCTGAAGGAGAGAACCAAGAGAGCAAAGAGGGGTCAATAAAAGTTCGATTTGGAGCACAGGTTGAGCTCACTCCCATCATTTTGGACCCAGAGTACCTCTTGGATCAGCACATCCTCATTAGTGTGAAGTCCACTGACAGTGACGAGTCGTATGGCGAGAGCTGTGTGGCTCTGCGAGCGGCCGAGTCGTCCTACACGGAGTTCCACGTGACGCTGACGCACCACGGGGAGCGGACGGGCGTGCTCTCTGGGGGCGTCCAAGTGCGCACCTCGGGGGGCAAGCAGACAGAGAAGCTATACGatTTCATCAAGGTGGAAAGGGATGATTCAGGAGGTCAAAAGGGCAAAAGTGGAGAATACTCCAACAAGCCTGCTCTTCCCTTCCACTCTGACTTCAGTAACCCAAATTACATGGGGGTGGGTTTTAAGACTGGGGGGCATTCTGGCTGGAGCTACAGCATGCCTCCAAAGCCAAGCCCTCCTCCAGGGCACATGGGCAAGGACATGACCCCAGGTAACCTCTCTCCAAAAAAGACTGGTCACGACCTGGCTGTCCGCAGTCTATCAGGAAATGTACCTGAGGATGGGACGCCCGCTGAGATGTTTGATAACCCTCTCTATGGCTCCAGGACCATGTCAAAGGTCGCAACGCGAAGCAAGGAGCAGGACTCCATGCGCAAGGATCATCTCTCTCCGCCCGAGCCTTTCTTTGCCTTCCCTAAGCCACCTGATCCGGAGGCTGAGCGCCTGCCCCCAGTCCCGACACCCCGAATGCGCTCCTACACCTGCAGCGAGACCAAGCCTCAgggtcctccctctctccagcccCCCGGCTTCACCAAAAAGCCGGTGATGCCGTCACGCTCCGAAGCGGGCATTACGCCAGCCAATAAGCCTCCTTTGCCGGTGAAGTTCCGTCAAGGGGACCCACAACCCACAATCaagcccagggactacagagaCAGCTCTGAGCTCCCCAACAAGGCCAGGGTCCCTGCAAGACCCATACAGCCTCTCCCTAAAGATGTGCATCACGAAGCGTGTGGAAAGATGGGAAGCTCAgtgaaatgataataataatgaataatgtgaAACGATTTCCCTTCGTCTTTCCCTCAATCTTGGAAAAATAAGTGTGAGTGATTCCTGTAACAGACTTGGCAAACCACAGCACATCCATCAATtaaaaattactttttaaaagaaattgcttttattttattttttacagtaaaTGACCTGTTCACTCCAGTAATTTTCTGCTCTATAATATAATAGCTTGTTTTGTTAAAATgggaccaaatattttttaatacagaCATATTCTCCAGAGAGTCTTAATAATGCAAAGTGTTACCATTTATCTTGTCAAGTGGTCGTTATCTTTCATAAATAATGCCTCAACTAATATATTTCTCCCAAATATTTATAATGTCTAGGCATGTCATTGTTCCGTCCAAGTATAGAATTGTGCAGTAAAATTAGGGATAACATGCAACTCTTAAGATTATCCCTGTTCTAAGGCTAATCTTCCATTAATTGTGTAGGATATTTGTCTGCTTTTTGAGAAAAATCGAATTTGTTTCAAACCTGTTCAAAAATTAAAGACCTAAAGAGGTGGTATTTTTGAAGATTGTTGTTTGTAAAActattttgtattgttgtcATTGTAATTGTTGTAATTTTGATCTTTTAAATGAGGGGCCTAAATGGCAACCAATATACTGAAGTGTCATTTTAGGCATCCATTTACAGTGGTGATTtttgtattcaaataaatattttctgttgC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017	SH2	SH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000300	Domain	Inositol polyphosphate-related phosphatase	Interproscan
IPR000980	Domain	SH2 domain	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46051	SH2 DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0009966	Biological Process	regulation of signal transduction	Interproscan
GO:0009968	Biological Process	negative regulation of signal transduction	Interproscan
GO:0016791	Molecular Function	phosphatase activity	Interproscan
GO:0045579	Biological Process	positive regulation of B cell differentiation	Interproscan
GO:0045659	Biological Process	negative regulation of neutrophil differentiation	Interproscan
GO:0045779	Biological Process	negative regulation of bone resorption	Interproscan
GO:0046856	Biological Process	phosphatidylinositol dephosphorylation	Interproscan
GO:0050776	Biological Process	regulation of immune response	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-