| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| KAJ8416988.1 | INTEGRIN BETA SUBUNIT | AAFF_1.1_unplaced_5 | 13109199 | 13192990 | + |
| CDS | |||||
| AAFF_T00328660 | |||||
| Transcript |
| AAFF_T00328660 |
| Protein |
| KAJ8416988.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00040 | fn2 | Fibronectin type II domain | Domain | Interproscan |
| PF00059 | Lectin_C | Lectin C-type domain | Domain | Interproscan |
| PF00362 | Integrin_beta | Integrin beta chain VWA domain | Domain | Interproscan |
| PF08725 | Integrin_b_cyt | Integrin beta cytoplasmic domain | Domain | Interproscan |
| PF17205 | PSI_integrin | Integrin plexin domain | Domain | Interproscan |
| PF18372 | I-EGF_1 | Integrin beta epidermal growth factor like domain 1 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000562 | Domain | Fibronectin type II domain | Interproscan |
| IPR000772 | Domain | Ricin B, lectin domain | Interproscan |
| IPR001304 | Domain | C-type lectin-like | Interproscan |
| IPR002369 | Domain | Integrin beta subunit, VWA domain | Interproscan |
| IPR012896 | Domain | Integrin beta subunit, tail | Interproscan |
| IPR013806 | Homologous_superfamily | Kringle-like fold | Interproscan |
| IPR014836 | Domain | Integrin beta subunit, cytoplasmic domain | Interproscan |
| IPR015812 | Family | Integrin beta subunit | Interproscan |
| IPR016186 | Homologous_superfamily | C-type lectin-like/link domain superfamily | Interproscan |
| IPR016187 | Homologous_superfamily | C-type lectin fold | Interproscan |
| IPR016201 | Domain | PSI domain | Interproscan |
| IPR018378 | Conserved_site | C-type lectin, conserved site | Interproscan |
| IPR032695 | Homologous_superfamily | Integrin domain superfamily | Interproscan |
| IPR033760 | Domain | Integrin beta N-terminal | Interproscan |
| IPR035992 | Homologous_superfamily | Ricin B-like lectins | Interproscan |
| IPR036349 | Homologous_superfamily | Integrin beta tail domain superfamily | Interproscan |
| IPR036465 | Homologous_superfamily | von Willebrand factor A-like domain superfamily | Interproscan |
| IPR036943 | Homologous_superfamily | Fibronectin type II domain superfamily | Interproscan |
| IPR040622 | Domain | Integrin beta, epidermal growth factor-like domain 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10082 | INTEGRIN BETA SUBUNIT | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005178 | Molecular Function | integrin binding | Interproscan |
| GO:0005925 | Cellular Component | focal adhesion | Interproscan |
| GO:0007160 | Biological Process | cell-matrix adhesion | Interproscan |
| GO:0007229 | Biological Process | integrin-mediated signaling pathway | Interproscan |
| GO:0008305 | Cellular Component | integrin complex | Interproscan |
| GO:0009986 | Cellular Component | cell surface | Interproscan |
| GO:0016477 | Biological Process | cell migration | Interproscan |
| GO:0033627 | Biological Process | cell adhesion mediated by integrin | Interproscan |
| GO:0034685 | Cellular Component | integrin alphav-beta6 complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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