| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| KAJ8416838.1 | KELCH PROTEIN | AAFF_1.1_unplaced_5 | 6729498 | 6756810 | + |
| CDS | |||||
| AAFF_T00327160 | |||||
| Transcript |
| AAFF_T00327160 |
| Protein |
| KAJ8416838.1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | ZBTB |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|BTB |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF00651 | BTB | BTB/POZ domain | Domain | Interproscan |
| PF01344 | Kelch_1 | Kelch motif | Repeat | Interproscan |
| PF05383 | La | La domain | Domain | Interproscan |
| PF07707 | BACK | BTB And C-terminal Kelch | Domain | Interproscan |
| PF08777 | RRM_3 | RNA binding motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000210 | Domain | BTB/POZ domain | Interproscan |
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR002344 | Family | Lupus La protein | Interproscan |
| IPR006630 | Domain | La-type HTH domain | Interproscan |
| IPR006652 | Repeat | Kelch repeat type 1 | Interproscan |
| IPR011333 | Homologous_superfamily | SKP1/BTB/POZ domain superfamily | Interproscan |
| IPR011705 | Domain | BTB/Kelch-associated | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR014886 | Domain | La protein, xRRM domain | Interproscan |
| IPR015915 | Homologous_superfamily | Kelch-type beta propeller | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR036390 | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24412 | KELCH PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:1990904 | Cellular Component | ribonucleoprotein complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
