Detailed information of KAJ8415524.1 in Aldrovandia affinis Gene info
Gene IDAnnotationScaffoldStartEndStrand
KAJ8415524.1TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATEDAAFF_1.1_unplaced_971241807144090+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|ZnF_A20

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01105EMP24_GP25Lemp24/gp25L/p24 family/GOLDDomainInterproscan
PF01754zf-A20A20-like zinc fingerFamilyInterproscan
PF02204VPS9Vacuolar sorting protein 9 (VPS9) domainFamilyInterproscan
PF03850Tfb4Transcription factor Tfb4DomainInterproscan
PF18151DUF5601Domain of unknown function (DUF5601)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002653DomainZinc finger, A20-typeInterproscan
IPR003123DomainVPS9 domainInterproscan
IPR004600FamilyTFIIH subunit Tfb4/GTF2H3Interproscan
IPR009038DomainGOLD domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR036598Homologous_superfamilyGOLD domain superfamilyInterproscan
IPR037191Homologous_superfamilyVPS9 domain superfamilyInterproscan
IPR041545DomainRABX5, catalytic core helical domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12831TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000439Cellular Componenttranscription factor TFIIH core complexInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005675Cellular Componenttranscription factor TFIIH holo complexInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0070816Biological Processobsolete phosphorylation of RNA polymerase II C-terminal domainInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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