Gene detail

Detailed information of KAJ8415440.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8415440.1	SPERMATHECAL PHYSIOLOGY VARIANT	AAFF_1.1_unplaced_9	4708010	4728537	+

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00424200

ATGTCTCTCAAGCTGCCTCGCAACTGGGACTTCAGCACCTTCCGAGGCGAAACCAATAAAATAGCACGGTCGAAGAGCGTGATGCCAGGGGAAGCGGGTGCGGGGGTTTTGCGGCCGGACTCCCCCAAGTCCAGTGAACGGCCACTCAAAACCGGCTGGCTGAAGAAGCAGAGGTCTATAGTGAAGAACTGGCACCTTCGCTACTTCGTCCTGAGAGGATGCACCCTGTACTACTACAAGGACGATAAGGACAGTTCGTTTCAGGGTCACATCAACTTGAGGTCAAGCAAAGTGAACGATCTGCCGTCAAACGCAGACGACCCTGGGAAATTCCTGTTCGAAATTATCACAGccagcAGTGGGGACCGGGAGCGGGACCCCTATGTCCTGATGGCCAACTCGCAGAACGAGATGGAGGAGTGGGTCCGAACCATTCGGAGGGTGATAGGGGCCCCTGCCAGTGGAGCAGTGTTTGGGAAGAGTCTGGGTGACACGGTGACGTACGAGCAGAGGTTTGGGCCGCACCTGGTGCCCATCCTGGTGCAGAAGTGTGCAGAGTTCATCCGGGAGCACGGATTGAGTGAGGAGGGCATCTTTCGGCTGCCGGGGCAGGACAAGCAGGTCAAACAGTTCAGGGACGCCTTCGATGCAGGAGAGAGGCCCTCCTTCCCCAGTGACACAGATGTCCACACGGTGGCGTCCTTGTTCAAGCTGTACCTGCGGGAGTTGCCACAGCCCGTGGTACCTTGGGCTCAGTACCAAGACTTCTTGGACTGCAGTCACCAGCTCAACCCAAACAGTGCGCTGGGTCGAGACAAGCTGGAGAAGCAGATCTATCTCCTTCCAAGAGCAAACTACAATCTACTCAGCTATATTTGCAGGTTCCTGTATGAAGTCCAGCAGAACTCCAAGGTTAATAAAATGAGCGTGGAGAACCTCGCCACAGTCATCGGGGTGAACCTACTGAAGCCTCAGACCGAGGACCCTATAACCATGATGAGAGgtaCGCCACAGATTCAGAAGCTGATGACGGTCATGATCAGGCAGCATGAGGGCCTCTTCCCCCCATGCAAGGATGTGGCCCCTTCGCCCCCCTCCAGGAAGTCTGGCAGCAAGAAGCCCAGCATTCCTCGCAGCTTTGTGGGATGGGAGTCTGCAGAGTGTGAAATCTCTCTGTCCGAGTcccctgaggaggaggaggacgattTTGACGCCGGAGAAggggaggggtcagaggtcactggGCCTGCCTGGCCATCCTGcccaccttcctcctcctcctcctcggcagCGGACCCGTGGACGGGGAGCCCTCGAAAGCGGACGCAGACCCTCCCTTCCCTAGGGGGCTCCCCTGGGACAGCAGTAGGGGAGGAGGGGCTGGCGAGGGGTGGAGGCCGAGGGGGCCGGTACCTGGGCAGCCTGCGACGCGGCCTGGCCAGCCCCCCGCTCCCCACTCTGGACGCCGAGAAGGGCACCCTCTCCGAGGACATCTTCAAAATCCTGGACCTGCAGAGGGTCTCACTGTTCACGGGAGCGCGGGGAATTGGGCGTGTCCCCGAGGCGGACCGAGGTGTGGAGGCGAAGGCCCAGGAGGCCGGGGGCTCTGGAGGCATCGCCACAGAAACCGCCAAGGCCGACCTGCCCAAACCCAGTGGACCCCCCCAACCCGAAGCGGAGCCCCCCAAGAAGGAGACGACAGAGAGGAACGTGGACCGAGAGAGGACAAGGCAACCTGTTTGCACTCCCAGCCCAGGGGCCAAGGAAGGGCCCCAGAGGGACCCCGTGGGAGCCCCCGAAGGCCTCGCTAACAGcctgCAGCAGAGAAACAGCGAGCTGGTCGCCACGGTAGCTGAGCTGCAGTCGGCGCTGGAGGCGGAGAAGCGGCTGGTGGCGGCGCTGGAGATCCGGCTGAGGAACGCCGAGCGCAGCCGGGACCAGGCCCAGAAGCGCAACCAGGAGCTGGACAAGGAGATAAAGAGTTCCTCACCCGGGCGCCCACCGGGCCCCCGTAGGGCATCCACGCCCCCACAACCCCTGGATCCCCAATCAGTCTAG

Transcript

AAFF_T00424200

AGTGAATGAAGAAGTCAACCTCACTTCCTCCTTTGAGAGAgccgagcgagagagagagagagaaatgaaattAGGCTTTTGTGATATTGATAACTAAACATTACCAGTAAATAAATTGTCATTACCAGCAACAAAATGGCCAGAACCCTCAGGCAGACACCAAAACACGTAGCACACTCTTACGTTTCCTAGAAACAGAACCAGAGAGGAATGTCTCCTGCGGGGGAGAGCGAgcggcaagaagggacatgttCGGAAgtgtaaaaaagaaagatatcAGTGTACAGGAAGGAGGAAGTGAGGTCGAGTTAGACTCTGTGGCCGTATGTGGCTGACAGAGAGGTCGCGTGTACGGCTTATGTGTGTTTTGCCTcctgagagtgagtgtgtgcatgtatgagtgtatgtatgtgtgtatgtgtgtatgtatgtatgtgtgtgtgtgtggaaactgACCTCTCGCATGAAGAAGAATGTCTCTCAAGCTGCCTCGCAACTGGGACTTCAGCACCTTCCGAGGCGAAACCAATAAAATAGCACGGTCGAAGAGCGTGATGCCAGGGGAAGCGGGTGCGGGGGTTTTGCGGCCGGACTCCCCCAAGTCCAGTGAACGGCCACTCAAAACCGGCTGGCTGAAGAAGCAGAGGTCTATAGTGAAGAACTGGCACCTTCGCTACTTCGTCCTGAGAGGATGCACCCTGTACTACTACAAGGACGATAAGGACAGTTCGTTTCAGGGTCACATCAACTTGAGGTCAAGCAAAGTGAACGATCTGCCGTCAAACGCAGACGACCCTGGGAAATTCCTGTTCGAAATTATCACAGccagcAGTGGGGACCGGGAGCGGGACCCCTATGTCCTGATGGCCAACTCGCAGAACGAGATGGAGGAGTGGGTCCGAACCATTCGGAGGGTGATAGGGGCCCCTGCCAGTGGAGCAGTGTTTGGGAAGAGTCTGGGTGACACGGTGACGTACGAGCAGAGGTTTGGGCCGCACCTGGTGCCCATCCTGGTGCAGAAGTGTGCAGAGTTCATCCGGGAGCACGGATTGAGTGAGGAGGGCATCTTTCGGCTGCCGGGGCAGGACAAGCAGGTCAAACAGTTCAGGGACGCCTTCGATGCAGGAGAGAGGCCCTCCTTCCCCAGTGACACAGATGTCCACACGGTGGCGTCCTTGTTCAAGCTGTACCTGCGGGAGTTGCCACAGCCCGTGGTACCTTGGGCTCAGTACCAAGACTTCTTGGACTGCAGTCACCAGCTCAACCCAAACAGTGCGCTGGGTCGAGACAAGCTGGAGAAGCAGATCTATCTCCTTCCAAGAGCAAACTACAATCTACTCAGCTATATTTGCAGGTTCCTGTATGAAGTCCAGCAGAACTCCAAGGTTAATAAAATGAGCGTGGAGAACCTCGCCACAGTCATCGGGGTGAACCTACTGAAGCCTCAGACCGAGGACCCTATAACCATGATGAGAGgtaCGCCACAGATTCAGAAGCTGATGACGGTCATGATCAGGCAGCATGAGGGCCTCTTCCCCCCATGCAAGGATGTGGCCCCTTCGCCCCCCTCCAGGAAGTCTGGCAGCAAGAAGCCCAGCATTCCTCGCAGCTTTGTGGGATGGGAGTCTGCAGAGTGTGAAATCTCTCTGTCCGAGTcccctgaggaggaggaggacgattTTGACGCCGGAGAAggggaggggtcagaggtcactggGCCTGCCTGGCCATCCTGcccaccttcctcctcctcctcctcggcagCGGACCCGTGGACGGGGAGCCCTCGAAAGCGGACGCAGACCCTCCCTTCCCTAGGGGGCTCCCCTGGGACAGCAGTAGGGGAGGAGGGGCTGGCGAGGGGTGGAGGCCGAGGGGGCCGGTACCTGGGCAGCCTGCGACGCGGCCTGGCCAGCCCCCCGCTCCCCACTCTGGACGCCGAGAAGGGCACCCTCTCCGAGGACATCTTCAAAATCCTGGACCTGCAGAGGGTCTCACTGTTCACGGGAGCGCGGGGAATTGGGCGTGTCCCCGAGGCGGACCGAGGTGTGGAGGCGAAGGCCCAGGAGGCCGGGGGCTCTGGAGGCATCGCCACAGAAACCGCCAAGGCCGACCTGCCCAAACCCAGTGGACCCCCCCAACCCGAAGCGGAGCCCCCCAAGAAGGAGACGACAGAGAGGAACGTGGACCGAGAGAGGACAAGGCAACCTGTTTGCACTCCCAGCCCAGGGGCCAAGGAAGGGCCCCAGAGGGACCCCGTGGGAGCCCCCGAAGGCCTCGCTAACAGcctgCAGCAGAGAAACAGCGAGCTGGTCGCCACGGTAGCTGAGCTGCAGTCGGCGCTGGAGGCGGAGAAGCGGCTGGTGGCGGCGCTGGAGATCCGGCTGAGGAACGCCGAGCGCAGCCGGGACCAGGCCCAGAAGCGCAACCAGGAGCTGGACAAGGAGATAAAGAGTTCCTCACCCGGGCGCCCACCGGGCCCCCGTAGGGCATCCACGCCCCCACAACCCCTGGATCCCCAATCAGTCTAGAGGAGTGGACTGTCACCTGGACTTTTGACCTTTGACTCCAAACTGTGAAATGCTGATTGAAGGGTCTGTATGGGTCAGTCTGCTTCAAGAAGCACCATACGTCAGGTGCCCTCTAAGTCAGGGTTCCATGGGTCGATGGTCTGAATTGGGGTGCTCAATTGCCTCTCAtaacccccccctccaaaaaaaaattttttttaaaggactaCATGCAACAATACAGAGTATGGacatgatttttaaaatgtattcagagtTCATGTTGTGCTGCTGATTGTGGCTGACCTCGGTATGGGAGTCCAGTCCCTGTCTCCTGTACCTGCAGGTTACCAGAGTCTCAGTTATCCCTGCAGTAAACAACAGCTTCAGATTTTTCAACGATTCCGTGGCTTTTTATCAATGGGATATCGACACAGACAAATACATTCACATCCCTGGTCGCCACTTCCCACACTGATAATAACCGGTTGATCACTGGTTTCTTGGCATATCACTGGATTCTTTCCTCTTAACTCCAAGTCAAAACAACTCTATCATCACTGGCATGACTTGCAACAATAACAAGGGAGATACCCCAAAATCTGAGCTAAAAAACCACAGCTACGAAGCAGTCTAATTTGTAATTGTTCATTGATAAAACAAAGGCCAGCAAATGTAGTAAGAACTTAATTTGCATTTAAGCCCTCTGCAAACCCTTGGAAATATAATGACTTGTTGTAATCCAGTCTCGGGTCAGCTGAGGCTAAGGTTTTAGCTAAATAGTCTTGCAGGCTCTATTAGAATGAAGGATAAAGACAGAACAGAAGCAAAGGGGCTGGAATGTTGAATTAGAATGCCATTATGAAATAATTTATGATTTTGTTAATTCTTCTAATGGAATAACATCCGTTTTTAATTGATGGatttgtgtgaaaaaataaaaaatatataaaattaacGAACCTGTCTGTTA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00169	PH	PH domain	Domain	Interproscan
PF00620	RhoGAP	RhoGAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000198	Domain	Rho GTPase-activating protein domain	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR008936	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR051025	Family	Rho GTPase-activating	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15228	SPERMATHECAL PHYSIOLOGY VARIANT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001891	Cellular Component	phagocytic cup	Interproscan
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0006911	Biological Process	phagocytosis, engulfment	Interproscan
GO:0007015	Biological Process	actin filament organization	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0051058	Biological Process	negative regulation of small GTPase mediated signal transduction	Interproscan
GO:0090630	Biological Process	activation of GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-