Gene detail

Detailed information of KAJ8414318.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8414318.1	STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE	AAFF_1.1_unplaced_13	4456875	4473695	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00051880

CTCATAACTACTCACGTTTTGATGcgaagagaaaaacaacacacttTGAGCCCAATAATAATCGTCCAATATGTGGCCAATGACGAAGCGCCAGTACATTTAGTTTCCTGTTGTGGTCCCGGAAGCAGCGGTGAATGTGATGCGGTAATCAGGTGGAGCTCCCTCTCTTTGTAGGAATGCCGAGCGGGGTGGACTATGGCGAATTTGGGGGCAGCCTCCCGGCCATCGCCTCCCTCAACGCCTCCTACTCTCAAACGTCGCAGTCCCTCCCCTCGCCCTACCACTCGCCCTACGCCGCCGGGAAGCGCAAGGCCATCTCCGACGTGCGCCGAACCTTCTGCCTCttcgtgacctttgacctgctcTTCATCTCTTTGCTGTGGATCATTGAGCTCAACATCTCAAATTCTATCTGGGAGAACTTGGAGAGAGAAGTCGTCCAGTACAACTTCAAGTCATCCTTCTTTGACATCTTTCTCCTAGCACTGTTCCGGTTCTTATGTCTGCAGCTGGGCTATGCTGCCCTTCACCTGAGACACTGGTGGGTCATCGCGGTCACCACTCTAGTGACCAGCGCCTTCCTCGTTGCTAAAGTCATCATCTCCAACCTCCTGTCCCAGAATGCCTTTGGCTACGTGCTGCCCATCACCTCCTTTGTGGTGGCCTGGCTGGAGACGTGGTTCCTGGACTTCAAAGTGCTCACCCAAGAGGCCGAGGATGAGAGGGCGTATCTGGCCGCATTGTGCGCGTCGAGCGAACGAGGGCCCATGCTGTACCCACGCGCTGTGTCTGATGGACAGTTTTACTCCCCACCTGAGTCCATGGCAGGCTCTGACGAGGAACTGGACGAGGAGGGACTGGGGCGTCGAGCGGTTACTGCTCAGGAGAAGGAGATTGTGCGTCAGGGCCGGGAGGCCATGGCTGTGGTGGAGCAGATACTGGCTCAGGAGGAGAACTGGAAGTTTGAGAAGAACAATGAGCTGGGAGATTCCGTGTACACCCTGGAGATCCCCTTTCATGGCAAGACCTTCATCCTCAAGGCCTTCATGCAGTGCCCAGCTGAGCTTGTGTACCAAGAGGTCATCCTACAGCCTGAGAAGATGGTCCAGTGGAACAGAACCATTTCCGGGTGCCAGATCCTGCAGCGCGTGGATGACAACACCATGGTGTCATACGATGTCTCCGCaggagcagcagggggcgtgGTGTCGCCTAGgGACTTTGTGAACGTGCGGCGAGTGGAACGCAGGAGGGACTGTTACGTTTCGGCAGGGATGGCCACCTGCCACGAAGCCAAGCCCCCACACAGCCGCTACGTCAGAGGAGAGAATGGTCCGGGCGGGTTTGTGGTCCTGAAGTCCAGCAGTAACCCGTCTGTGTGCACCTTCATCTGGGTCCTCAACACCGACCTCAAGGGCCGACTACCCCGCTACCTCATCCACCAGAGCCTGGCAGCCACCATGTTTGAGTTCATGTCCCACTTGCGCCATCGGATTGCCGACCTGCGCTCGACTCTGCGTTAGAGTGCCCTGCGGCTCACAACACACCCCCCCTGGATGGGAGGAGATACTACAACGCCTGGAACTTTGCAGTGGTTGCATAGAAAGTGCTAAGGACCTTGAAGCTGTATGAACTCCAGAATCAACCTCACACCCCATCAGATTAAGCTGGACTTTTATCTGTCTATTCGTTCGTAACTGAAATCTCAACAGAGCAATGAACCCAAGGAGCATCCAAGGGGATCATTcttgcatacatacacatacacacacacacacacacacacacacacacacacacacacacacacagcaagccGATTCCAGCAGCCTGTGATGTCTTTTACTTTTATTGTGGTGGAAAGAATGATCTTCTCCCCCCAGAGATGAATCTCTTGCAATATATGAAGATTACACGCAGACTTTTGCTAGAATCTAGAATGCGACCCGACCTGGACTAGTGTGTATGAGTAGGTATGATGGCCAATACTGGGCCAGACTAGACTGAATGCTAGCTATCACCAGCATCATGCTTGTTTTAACTCTGCATGCTGATGAGTGATTAGTTGCCCCTTGTCCCGTCATGTCTTAACATGGCCTGCCTGTGCATCCAGACGCTTGCCTCCATCACTGACTGACACTATGCATGGATAGCAGACTCCGCTAGTCTTCATACACCCCCCAGCTTACTGCGATCGAGAAGGAGGCGACGCCGAGTCTGTACTCGGCATGCGACAGAGAGTGAGGTCACAGAGGTTGTCACAGGTGGGGTGTAGCCTTAATATGTGAACAaacatcagcaaaacaccattGTTTTTTCcggattttttttaatgagttttttttgccaaaatcacgcttgttatatttttttgtacattttatgtatGTTTACGATGATTTGACTCCCTTAATAATGCACACCACTCACCCGGGATAATGGAGAATAAGGCATGTTTTGTTTCCGTTTGgggttttctgttttatttgaatCCATGTCAACTCCGTAACGTTTTAAAGGGCCTAAAACAAACTGAATAATAAAAGCCTGTCTGAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01852	START	START domain	Domain	Interproscan
PF10457	MENTAL	Cholesterol-capturing domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002913	Domain	START domain	Interproscan
IPR019498	Domain	MENTAL domain	Interproscan
IPR023393	Homologous_superfamily	START-like domain superfamily	Interproscan
IPR029867	Domain	StAR-related lipid transfer protein 3, C-terminal	Interproscan
IPR051869	Family	StAR-related Lipid Transfer (STARD3)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46121	STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005765	Cellular Component	lysosomal membrane	Interproscan
GO:0005770	Cellular Component	late endosome	Interproscan
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0008289	Molecular Function	lipid binding	Interproscan
GO:0015485	Molecular Function	cholesterol binding	Interproscan
GO:0030301	Biological Process	cholesterol transport	Interproscan
GO:0031902	Cellular Component	late endosome membrane	Interproscan
GO:0099044	Biological Process	vesicle tethering to endoplasmic reticulum	Interproscan
GO:0120020	Molecular Function	cholesterol transfer activity	Interproscan
GO:0140284	Cellular Component	endoplasmic reticulum-endosome membrane contact site	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-