Detailed information of KAJ8412203.1 in Aldrovandia affinis Gene info
Gene IDAnnotationScaffoldStartEndStrand
KAJ8412203.1UBIQUITIN CARBOXYL-TERMINAL HYDROLASEAAFF_1.1_unplaced_2057952285819680+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP
Ubiquitin FamilyUBD|ZnF|ZnF_UBP

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF02148zf-UBPZn-finger in ubiquitin-hydrolases and other proteinDomainInterproscan
PF08612Med20TATA-binding related factor (TRF) of subunit 20 of Mediator complexFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR001607DomainZinc finger, UBP-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR013921FamilyMediator complex, subunit Med20Interproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR050185FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0016592Cellular Componentmediator complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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