Gene detail

Detailed information of KAJ8410555.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8410555.1	SENTRIN-SPECIFIC PROTEASE	AAFF_1.1_unplaced_26	3913658	3955081	+

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00194590

ATGCGTTCTGTTGTGATGCCAGGCACAGCTGAGGTGAGGAGATCCCCCGATGGGAGTGCAGCCCACGCAGAGGGAAGAAAGACAAAGACCGTTTCAATCCCCGTCGACAAACTGGCCAGCTCTAGGATGGCCAGACCTTTCAGGATCCCAAAGAGGAAATCCCCAGACGATAGGTGTACACAGATGGAGTCGCCATTGTCTCGTCTCCAGGATTCCCACGTCCAGAAGATGCAGTGGACCCAGTTCTCAGGCATTGGTAGGAGGTTCCAAGGGTTCAGGCCTCTGAATGAAAACGTCTCCTCAAATCATAGCCCGGCACGAGGCAACATCAATGTAGGCGGcatgcatgcCAGGCTGGTCCTGACAGACATCCTGAAGACAGAGCTGGGATCGGAGTACCTGAACAGTGGAAGGTCTTGTCCTAAAAGAGCGTCGGACACACTCTGCCAGGACAGGTCTCTTCCTAATAGAGTGTTGGATAAAATGTGTCAAGGTGCTTCGCAGTCATTGTTGAGCGGGACTGTGACCACAGATAGGAAGCAGGCCCACCTAAAGGACACAGCACAGCCCCCAAGGGTGGGTAAGCGGGAGAGAGCCATGCCTGAGGGCCTCAAGAATAGGAAGTCCAGCTCTGGAAGTGAGAACTCAGAAGTGGAAAACAAAGAGaaggagaagaggagggcCACTCTGGGGAGGAGTAACAGACAAGTAGAAAATGCTGGCGATGAACACTCTACCATCGGAGTGTCGAGGGGAAGTGTCCTGCGGCACTCGGGTGAGAGAATGGGTAGGAGGGTGATCCCTAAACATCTCGCCGTGGAGGAGTTGCAAGGCAGAGCCCCTTCCGCTGACTCGGTGGGAGAAGAGTGCTTAGCCCGGGGGCCTGACCCACAGACACCCTCAAAGCCCTGGGACAGAGAAAAGAAGACCTCCCCAAAGTTATCCACCTCCTCCACTCGACCCAAGAAACCCAAGCTGAGTGCCACAGAACCCATCGTGCTGTCCAGCGATGATGACAGTGAGGAGGAGAAAGATGAACCTGTCCCGCCCCCCCCGCATGTGAGGGTCCTCCTTCCCAGCAGCAGTATGGAGCCCCAGAGTGAACATCATCCAGAGGAACAGAAGGACACACAGGCCCGTGATGAGGAGTTGTTGCCATATGTGGGCTCAGAGGAGATTCCGGGAGACATGTCCCCCATCATTGTGCTGTCTTTTTCTTCCCTAAATATAAACACACTGAGGGTTGGGGCCAATGGCAACATCACGATCACTAATGACTGCATCACTATTCCTCTGAAAGATTCCTCAGGTGTGGTGGACGTTGCTGTGGCTTTGGTGACATCAGAGGTGCGCAGATACGGCGTGTGGGACGGGAGCGTGCTGTGTGATTGGGAGgggcctgctcctcctcccgCGCTCCTGTTCCTGTGGGTGTCGGATGCCCAGGCACAGCTGGTCCAGGCAGAGCTGTCTGCGATCCACCCTGTGCAGCAACCAGgCCTGGCAAGCCCGTTCCTTCTGCTGAGCCTGACGGACAGTCTGGAGGGCCTGCAAGGTGTGCTGCTGGCCTCTTTCATGGAGATGCTGGCGCTCAAATGTTGGGCTCAGGACCTCATGCGCCCCTTGTCCTGGAGCCAGGGCGTAGCCATGATCCGCCGCTCTGGTCAAGACCCCTACCTTCTCTCCCTTCTGGGGCAGAACAGTGAGCCTGCCCAAACCCTGGAGGAGCAGACTGAACCCCACCTTGCCGCTACAGAGCAGGAGAGTCCAGCTCGGCCCACACCCACCTACACACTGTGTCACTGCAGAATCAGAAGCTTGTACTCCGTGTCCATTGCCCCAAGGCCTGGCCCAACCTGGACCTGCCACAAGCCCCAGCGCCCACCCCGCAGGCTAATTGTGTTCCCCCCGCCTCCTTCCAAAGGAGGAATTCTAGTCACGACAGAGGATCTGGAGTGTCTGGACAGCGGCGAATTTCTGAACGATGTCATCATTGACTTCTACCTCAAGTATCTGATGATGGAGAAGGCTCCGAAAGCAGTAGCCGAAAGGTCACACGTCTTCAGTAGCTTTTTTCTCAATCAACTCACTCGGAAAGACCATGCCAGTGAGGAGTCGTCCTGCTACACAGCTCAGGTAAGACGACACCACAGAGTGAAGACCTGGACCCGGCACATAGACATTTTCAGCAAGGATTACGTGTTTGTGCCAGTTAATCAAGACTCACACTGGTACCTGGTGGTGATCTGCTTTCCTGGGCTGCTGGAGCCCGAGTATGAGAAATGGAGCATATCTGGGCTGAGAGACCCAGGAACTGCCAGGAACTGCCAGGAACAACTGACCTATGGCACAGAGGGAGATAGAAGGAGGTCTGCACACAGTGTGCCGGAGTGTACACAACTTGGTTGCCAGCGGAAAACTGTCTGTAAAAGGCCCTGCATTCTCGTCATGGACTCTCTAAAATTATCCTACCATGAGCGCGTTTTAAAACTTTTACGGGAGTACCTGCAGGTGGAGTGGAAGGTGAGGCGGGGTACATCTCGAGACTTCACCACAGTGCAGATGAAGGGGACTCACTGCAGGGTCCCACTGCAGGACAACAGCAGTGACTGTGGGGTATACCTGTTGCAGTATGTGGAGAGTTTCGTGCAGAACCCGGTGGTACACTTTGACCTGCCTCTGCACCTGGGGCACTGGTTTCCACGGCAGCAGGTCAGGAGGAAGCGGGATGAGATCAGGGATATGGTGCTGCAGCTGCATCGCAAACAACAGTGTGGGAAAGTGTGGCAGCTACCACACCTGGACTGA

Transcript

AAFF_T00194590

AGTACATTGAAATCGCTCTCGCAGCGGAAACATAATTTATCCCTTTCTTTTGCAATTTAGTGGCTAGCATGATTACGGAATTGAaaataagatttaaaaaagGTATTTATGGATTGATTGGTTGACCATGCATTTGCTGTTGCAGTTGATTGTTGGCTAGGTACCACATGCGTTCTGTTGTGATGCCAGGCACAGCTGAGGTGAGGAGATCCCCCGATGGGAGTGCAGCCCACGCAGAGGGAAGAAAGACAAAGACCGTTTCAATCCCCGTCGACAAACTGGCCAGCTCTAGGATGGCCAGACCTTTCAGGATCCCAAAGAGGAAATCCCCAGACGATAGGTGTACACAGATGGAGTCGCCATTGTCTCGTCTCCAGGATTCCCACGTCCAGAAGATGCAGTGGACCCAGTTCTCAGGCATTGGTAGGAGGTTCCAAGGGTTCAGGCCTCTGAATGAAAACGTCTCCTCAAATCATAGCCCGGCACGAGGCAACATCAATGTAGGCGGcatgcatgcCAGGCTGGTCCTGACAGACATCCTGAAGACAGAGCTGGGATCGGAGTACCTGAACAGTGGAAGGTCTTGTCCTAAAAGAGCGTCGGACACACTCTGCCAGGACAGGTCTCTTCCTAATAGAGTGTTGGATAAAATGTGTCAAGGTGCTTCGCAGTCATTGTTGAGCGGGACTGTGACCACAGATAGGAAGCAGGCCCACCTAAAGGACACAGCACAGCCCCCAAGGGTGGGTAAGCGGGAGAGAGCCATGCCTGAGGGCCTCAAGAATAGGAAGTCCAGCTCTGGAAGTGAGAACTCAGAAGTGGAAAACAAAGAGaaggagaagaggagggcCACTCTGGGGAGGAGTAACAGACAAGTAGAAAATGCTGGCGATGAACACTCTACCATCGGAGTGTCGAGGGGAAGTGTCCTGCGGCACTCGGGTGAGAGAATGGGTAGGAGGGTGATCCCTAAACATCTCGCCGTGGAGGAGTTGCAAGGCAGAGCCCCTTCCGCTGACTCGGTGGGAGAAGAGTGCTTAGCCCGGGGGCCTGACCCACAGACACCCTCAAAGCCCTGGGACAGAGAAAAGAAGACCTCCCCAAAGTTATCCACCTCCTCCACTCGACCCAAGAAACCCAAGCTGAGTGCCACAGAACCCATCGTGCTGTCCAGCGATGATGACAGTGAGGAGGAGAAAGATGAACCTGTCCCGCCCCCCCCGCATGTGAGGGTCCTCCTTCCCAGCAGCAGTATGGAGCCCCAGAGTGAACATCATCCAGAGGAACAGAAGGACACACAGGCCCGTGATGAGGAGTTGTTGCCATATGTGGGCTCAGAGGAGATTCCGGGAGACATGTCCCCCATCATTGTGCTGTCTTTTTCTTCCCTAAATATAAACACACTGAGGGTTGGGGCCAATGGCAACATCACGATCACTAATGACTGCATCACTATTCCTCTGAAAGATTCCTCAGGTGTGGTGGACGTTGCTGTGGCTTTGGTGACATCAGAGGTGCGCAGATACGGCGTGTGGGACGGGAGCGTGCTGTGTGATTGGGAGgggcctgctcctcctcccgCGCTCCTGTTCCTGTGGGTGTCGGATGCCCAGGCACAGCTGGTCCAGGCAGAGCTGTCTGCGATCCACCCTGTGCAGCAACCAGgCCTGGCAAGCCCGTTCCTTCTGCTGAGCCTGACGGACAGTCTGGAGGGCCTGCAAGGTGTGCTGCTGGCCTCTTTCATGGAGATGCTGGCGCTCAAATGTTGGGCTCAGGACCTCATGCGCCCCTTGTCCTGGAGCCAGGGCGTAGCCATGATCCGCCGCTCTGGTCAAGACCCCTACCTTCTCTCCCTTCTGGGGCAGAACAGTGAGCCTGCCCAAACCCTGGAGGAGCAGACTGAACCCCACCTTGCCGCTACAGAGCAGGAGAGTCCAGCTCGGCCCACACCCACCTACACACTGTGTCACTGCAGAATCAGAAGCTTGTACTCCGTGTCCATTGCCCCAAGGCCTGGCCCAACCTGGACCTGCCACAAGCCCCAGCGCCCACCCCGCAGGCTAATTGTGTTCCCCCCGCCTCCTTCCAAAGGAGGAATTCTAGTCACGACAGAGGATCTGGAGTGTCTGGACAGCGGCGAATTTCTGAACGATGTCATCATTGACTTCTACCTCAAGTATCTGATGATGGAGAAGGCTCCGAAAGCAGTAGCCGAAAGGTCACACGTCTTCAGTAGCTTTTTTCTCAATCAACTCACTCGGAAAGACCATGCCAGTGAGGAGTCGTCCTGCTACACAGCTCAGGTAAGACGACACCACAGAGTGAAGACCTGGACCCGGCACATAGACATTTTCAGCAAGGATTACGTGTTTGTGCCAGTTAATCAAGACTCACACTGGTACCTGGTGGTGATCTGCTTTCCTGGGCTGCTGGAGCCCGAGTATGAGAAATGGAGCATATCTGGGCTGAGAGACCCAGGAACTGCCAGGAACTGCCAGGAACAACTGACCTATGGCACAGAGGGAGATAGAAGGAGGTCTGCACACAGTGTGCCGGAGTGTACACAACTTGGTTGCCAGCGGAAAACTGTCTGTAAAAGGCCCTGCATTCTCGTCATGGACTCTCTAAAATTATCCTACCATGAGCGCGTTTTAAAACTTTTACGGGAGTACCTGCAGGTGGAGTGGAAGGTGAGGCGGGGTACATCTCGAGACTTCACCACAGTGCAGATGAAGGGGACTCACTGCAGGGTCCCACTGCAGGACAACAGCAGTGACTGTGGGGTATACCTGTTGCAGTATGTGGAGAGTTTCGTGCAGAACCCGGTGGTACACTTTGACCTGCCTCTGCACCTGGGGCACTGGTTTCCACGGCAGCAGGTCAGGAGGAAGCGGGATGAGATCAGGGATATGGTGCTGCAGCTGCATCGCAAACAACAGTGTGGGAAAGTGTGGCAGCTACCACACCTGGACTGAGCAGACGAGCTGCAGAGGAGAATGCAAAACCGCTCATTGCCTTACTGAAAATACATTGGCttctttttatattaaaaacctAAGGTAAAAAAGCTGTAGCAATATCTTTTttattgtacatattttataatttattttttatttcactgaTGTAATATATGAAATGATACATGTTTGAAGATGTAAATATTCACTCTAAACTAACTTATGCAATATGTTGTCATGGTTCAGTCATTGTCACATTTGAATGATTTACCAATTATGTTCTTAGATTTTTAATGTGCAGTTTTAGTCTTACTCGCATAGCTTTTATTTGTGTAGTTTCTGGAAGCAGTGGCTGTTGATTTGAATAGGcg

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	DUB\|ULP\|ULP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02902	Peptidase_C48	Ulp1 protease family, C-terminal catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003653	Domain	Ulp1 protease family, C-terminal catalytic domain	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR051947	Family	Sentrin-specific protease	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46896	SENTRIN-SPECIFIC PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008234	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0016926	Biological Process	protein desumoylation	Interproscan
GO:0070139	Molecular Function	SUMO-specific endopeptidase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-