Gene detail

Detailed information of KAJ8409711.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8409711.1	PROTEIN CBG16327	AAFF_1.1_unplaced_29	2475982	2505483	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00217700

ATGGAGGAGGAACACACCCACTGCGTGAACTGTGTGAGCCGGAGGTGCATGACCAGGCCAGAGGCTGGCGTTTCCTGCGACCTCATGAGCTGCTCTATGGTCTGCGGAGCGGTTTTTCACTCGTGCAAGAACGACGAGCACCGTCTGCTGTGCCCGCTGGAGAGAGTGCCTTGCCTGAACAGCGGCTTCGGGTGCCCGTTTACGGTCGCCCGGAACAAAATCTCCGAGCACCTCGAGATATGCCCAGCCAGCGTGGTGTGCTGCACCATGGAGTGGAACCGGTGGCCCGTCAGCTATGCCGACCGCATATCCTACGAGAACCTGAGCAAGGACGTCGACCGAATGCTGTTGGAGTCGCTCAAGGTGGCCACCATGATGTCGAAAAATGGCGACAGACCGCCCATCGGCGTGAGCGAAAAGAAGGTGGCCGTGGCCTCGAGCCTGCCAAAGGACAAAATCACCAGTGGTATAAACGGCTTGCATGAGGAATCGTACAGTGAACTCTACCAAGCCACAGTGGAGACGAGCAGAAGTCTGGTTGCAGCATTGGATATCCTTAGTAGTGCAACGAAGGAAATCGACTTGATTAATGGAAACGTACCCGAGGGGCAGGTGGAACGGAACGGAGCGTTCCATAACGGGGACAAAGCTCTGGACCTGGAGAACGTTGAGATGAAGGAAAGCGACAGCGAATCAGATTGCGAGCTTGGAGCGGTGGGCGGGATGGACCATGAGGCGGTTGAAGACCGGGACGGCGGGAGTACGTGGAGGGAGTGTAATGGCTTTCTCAAGCGTGGGCTGGGGGAAGGAGTGGAGGAGGGCAGCGTGTTGGGCCTGTTTGAGAAAGAGGAGAAGCCCCTTTGCAATGGCTTTCACTGTGTCGGGGAGAGCCCAGACAAGTCTGGGCAGGACGAAATGGATCTGGAGGCAGCTGAGGAGCAACACCCTGATACTAACGGGTCTTGGGAAGTCATCCAGCCTGCAGCCTACAGGCCTGTGGTGCTAAGCCATTCTATACCCATTGCAGCACAGGAACCTTCCTGTTCTCGGCCACCACCGCCACcgccactgccactgccactgccgcttcctcttcctcttcctgatATCATTCAGCACAACGGAATGCACCACTTGCCCCTCGACTTCGAGGACCGATGGTTCGAGCGCAAGCTGCAGAACCTCCAGGTGCTGCGAGGGATGGGCGTGTTCGCGTTCAACGGACGGAGGGCCCTGTTCGCCGACCCGTACTCGTTCCGCGCGAAGATGGAGGACAAGTCGGTGGACACCCGCTTCGTGGACGGCTACCGCATCGACTTTGGCACGCAGACCTTCTCCTTCCCCTCCGCCATCCTGGCGACCAACACCATGGTGGGCGACATCGCCTCGGCGTCCGCCTGCGACCACGCCAACCCGCAGCTCTCCAACCCCAGCCCCTTCCACACGCTGCGGCTGGACCTGGTGCTGGAGTGCGTGGCCCGCTACCAGACCAAGCAGCGCTCCATGTTCACCTTCGTGTGCGGGCAGCTGTTCCGCCGCGACGAGTTCTCCTCCCACTTCAAGAACGTGCACGGCGACATCCACGCCGGCCTCAACGGCTGGATGGAGCACCGCTGCCCCCTGGCGTACTACGGCTGCACCTACTCCCAGAGGAGGTTTTGCCCGTCGGTGCAGGGGAACCGGATCATCCACGACCGGCACCTGAGGTCCTTCGGGGTGCAGCCCAACGGGTCGGCGCCCCCGACGGGGCCCCTGTCCAGCAACGCGTGCTCCTTCGGCCACGACTGCGACcacctcagcagcctgcccttCGAGGTGCTTCAGCACGTGGCCGGGTTCCTGGACGGGTTCAGCCTGTGCCAGCTGTCCAGGGTGTCGCGGATGATGAGGGACGTCTGCGCCAGCCTGCTGCAGGTTCGCGGGATGGTTGTCCTCCTGTGGGAGAAGAAGCAGTTCCCGTTCGGGCCCTCGTCCTGGCAGATCAAAGACAAGGTGTGGAGGTTCAGCACGGCTTTCGGCACAGTGAACGAGTGGAAGTTTGCCAACATCACCAGCATGGCGGACCACCTGAAGAAGTGCAAGTTCAACACGGTGGAGCGGAGGGAGGAGGCCATCCCCTTACCCTGCATGTGCTTTACCAGAGAGCTCACGAAAGAGGGACGATCACTGCGCTCCGTCCTAAAGccaCGCACGGACGTTGAGGTGTTTGTGCTGGGCTCGCGGCCGGAAATGGGACACTGGGATCCGAATAACGCGGTGGTGATGAAACCGACGCAGGCGGTGCTGTCCACGTGCGAGCCGTGCTTCTTCCTCGGCGAGGTGCTGCTGTCGGAGCCGTATACAGAAACCTTCTGGTTTAAGTACATAAAACGCGTCGGCGGCAACATGACCTGGGAAGGCAACGGTCCCCATCACGACCGCCGCTGCGAATACGACAAGAACAACGTGGTGGACGGGGCCTACTGCCACCCCGTCGGTCACTGGATCGAGGCCACCGGCCACACGGACGAGATGAAGCACACCACCGACTTCTACTTCAGCGTGGCCGGCCACCATGCCATGCACTTCTCCAGggTCCTGCATAGGGTCTGGCTGGGGAGCTGCCCGCGGCAGGTGGAGCACGTTACGCTGAAGATGAAGCACGAGTTGGGCATCACGGCGGTGCTGAACTTCCAGACCGAGTGTGACGTGGTGAACAACTCGCACGGGTGCCGGCGCGACACGGCAGAGGACATGACCCCCGAGGTCATGGCACAGCTGTACCGAGACTGCAGACTGGCCTACGTGTGGATCCCCACCCCAGACATGAGCACCGAAGGAAGGGCCCGCATGTTGCCCCAGGCGGTCTTCCTCCTCCACGGGCTGCTGGAGAACGGGCACACCGTCTACGTGCACTGCAACGCCGGCGTGGGCCGCTCCACCGCCGCCGTCTGCGGCCTCCTCATGTACGTGTTGGGCTGGAGCCTGAGGAAGGTGCAGTACTACGTGACGGCCAGGAGGGCGGCGGTCTACATCGACGAAGAGGCCCTGCTCCGCGCCGAGGGGGACTTCCTCCTGAAGTTCGGGCGCCTCCGTCCCGGCATCTGCGACGTGGAGATATGA

Transcript

AAFF_T00217700

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00686	CBM_20	Starch binding domain	Family	Interproscan
PF00782	DSPc	Dual specificity phosphatase, catalytic domain	Domain	Interproscan
PF15965	zf-TRAF_2	TRAF-like zinc-finger	Domain	Interproscan
PF15966	F-box_4	F-box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000340	Domain	Dual specificity phosphatase, catalytic domain	Interproscan
IPR000387	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR001293	Domain	Zinc finger, TRAF-type	Interproscan
IPR001810	Domain	F-box domain	Interproscan
IPR002044	Domain	Carbohydrate binding module family 20	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR013784	Homologous_superfamily	Carbohydrate-binding-like fold	Interproscan
IPR016130	Active_site	Protein-tyrosine phosphatase, active site	Interproscan
IPR020422	Domain	Dual specificity protein phosphatase domain	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR031890	Family	F-box only protein 30/40	Interproscan
IPR034831	Domain	Laforin, CBM20 domain	Interproscan
IPR036047	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR043013	Homologous_superfamily	Zinc finger, TRAF-type, N-terminal	Interproscan
IPR045204	Domain	Laforin-like, dual specificity phosphatase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15933	PROTEIN CBG16327	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan
GO:0019203	Molecular Function	carbohydrate phosphatase activity	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:2001070	Molecular Function	starch binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-