Gene detail

Detailed information of KAJ8408872.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8408872.1	C-TERMINAL-BINDING PROTEIN	AAFF_1.1_unplaced_33	4681504	4686506	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00246900

ATGGCCACTCCTCAGTGGCCCGGCCTAGACCCCTCCTCCGTCCACACTGAGCTGAATGGAGCTGCCACCTACAGGTTCCCCACAGGTCTCGTTGGCGTAACGGCGGGTGGCCTGTCGGGGGCGGTGGCAGCCGTAGAGGGGATCGTTTCGGGGGCCCTGCCCATGGCACACGGAATCGCGCCGGTGTCACGGCCCCCTCACACCCCGTCACCGGGCCAGCCCTCTAAGGCGGAGACAGACCGGGACATCCCAAGCGACCAATagcccacccctcccccaaaatccagtaccaccaccacctccacatTCCGTCACCCACGGAAAATCCCTCGACCTTCTCACGGGCAGATTGACTCTGGCGTCCTGATCCGATCTTGTCCAAACCTGATCCAGTCCCACAGAACAGAAACACCATAGGAGGGACCAGTCTGATGTCTTTCCTCCCCcccttctttctctcactctctccatttGTCATTCTTTTCCTTTTAACACCATGTTGTAAGAAGCAATAACTATCTTGTCTAGGATTCAGCTgtttctggttttgtttttgtaacacAAGATGTTTCTTTTTGTAGTGTATCTGAACTGACACTTGTCTCTATAAGCtcattttaggtttttttaacaGTGAATTTCAAAATACGCAAGGTTAAGGATGTggaataatatttgttttccttcAATACCTGctgttaaaaagaaaacaagatccAGTTAGACAAGTGTCTCTGAATGAGTTTCAAGCTTTTGTAATTCTTTAGTAATCTTTTGCTATGAGTCTGGATTAAAACTGATTTGTTTGATGGTGATTTCTATGAATGGTGAAAAAAGCCATCATCTTCTCCACAATTTCACCTCCTCCATTACTCTCTCAGTCTAAGCATGTGAACACCCGGCACACCCGCAGTGTCATTGTGTCTGCAGCTGGGGCGAAACACCCTCGACCAGACTTCCTGTCTtaggtcagaggtcaaggtTGGTCGAGGCTGGCAGCGCATCCCCGTGGACGACGCACCCCTGGGCTCAGTCCCGCCCGGTTACGCCCCTTCAGCTCGGGGGGCAGGCTGGGAGAGGGAGGCAGCAGCCTCCGCTTGGTGGGCTCCACCCAGCCTGCGTCACTGCGGAGGGATTTTCTGTCACTGCGCAGCAAGGATGCTGTTCGTTTCAGCCTTGGGTCCCTTGAGGGGGAGATGAGCTCACAAACTAAAAAGAGTTGGACGTAGCTTCCACATCAAAGGCACCTCCTTCCTTAAAAAGCTGCACTGGACACAGTGTTGAATGGACACTAGTGGAATTTTAAAGAGGCATTCTTTCCCAAATTCTATTGATGCGGGGCCCACCCGCCAAACTTTTAGTGACCTTCCCTGCTCCTATGCCAAAAGACGTCAAACAGAACATGGTTCTCTTTACATGAGCAAACAGATGTGATCCATGGATTATTTCGCCGTTACGCCCCAATCACATTTACAGACTACTAAGGTGGCTTACGAAGTCTGATGTTTAACCCCTTCCACCCCTTCCATAAATGACGCCTAATTGGAGTGCACTGGAGAGCAGTAGCCACCCCAGGGGTGTGATGTGGTGTCGGGGCCAGCAGGTGGCACCTGTCATTTATTCTCTTAGCGTGCACCGAGAGCACACAGCTTTGGTGCTTTGAGTTACAGTGTGCGGTGATGTATGCTACCTTAACTGACTTCCAAAGACTTGCAttctttgctctctctctttctctctcaatcttTCTCCCCCATCCTCCCCCCCGGCCCGCCCTGCCTCGTTACCCTGTGGAACTCGTAACGATGTCGCTCTAGCGGGCCGTTTGAGTTCTGGAGCTTGCGAGTGAAAAAGCCAGCCAGCTCTACAGAAATGGCAGTAGGGTGTCAGAGCAGCATGTGCCTGAACCTGGGAACCCCTGACTCAAACCAccatctttttcttcttcttttttttttttttttaaccaaagggGAGCAGATTCTGGGAATTACACGACTCTCTACTGTGAACGCTGTCCTGCGACAAAGGAATACCTTTCTAGTACCTCATTAACAGATATTGAATGTACTCTCCGAACTTTTTCTCCATGTACAGTTTTTTAGATGCTACAGAGTTCTTTACAAGAAAAGATGATCAAACTGGTGAAAATTGTTTAAAAGAaacccattaaaaaaaagacgACAACAtacttttaaatacaaaaaaaggacTTTACATGTCTTTGGGTGATTTCACCGAGTCTCAGGCTTTAAAAACTAGTAAttaattctttttttccacctttatttgtaTCATTAGATTTAATCTTTAATctgtttaaaaagaagaaaaaacaggaaaaaacagTAATGCACCcctgttcccccccccctccccctccctgtgtgGTAGTGTCATGTGATTGTTGTCTCAACAGTAGGGGGTGGTCCCCattagtttattttttctttttttttttttttttttttttgcagaaaaacaaacaggaaaataGTAGTGGGGGGGGGATCAGGCATGAAGGCATCAGGCATCTCTCGTCTCAttccttgtttttttaagttgttttttttcagtaCGGAGGTAGTTTGGCCTCAGTTTTTACCTGAAGCACTGTGTCTGGTTTTGGATGACTGGATTTCTCCACACATTAAtgggaaaataaaatcaataggtTAAAACTTTAAATAGAGTTTTTGAATGGGCACTAGTGGAATTGTAGTTTTTCATTAAGGGAAGTCCTACCTGATttgcacacatttaaaaaaagatcaggaggggcctcgggtggtgtagcggtaaaggcattcgtccggaatgcaggttgcccactgcggccgcggtttgaaacccggctgtgccagcccggctctggtgattggctgaccaccccagagggaggggggagggagagctggcatgaactcgccgagaagtgcaaaaggcatccctgtaaggaaaaaactggcttgactccgaggacgagcggcaggctcgtgggggagggtaaattgaaataaatagagggtgtaattggctaccaaattgggaggaaaaacggggaaaaaatctgaaaccaataataaaaattaaaaaaactgcttgTCAGCTGGTTGAAAGTGTTTTTGCTCTTCTGTAATCTCTCTTTAGGGGATTATGTTTTAAAGGGCTGGTGAGGTTGTACAAGGATTTGAGACGTAACCCATCGAATGTGGAAATGCTTGGCTGGTGGTGATGATATAATAGTGGACCTCCCCCCGCCCACCATTGATGTTTGTCCCTCTTCATTTACCACCTCCTTGTGTTGAGTAGGGGGCACGCAGTCTACTTGTAGTCAATGTGTTGGGTGCCAATGTAGTTCTGTCATTATGtgtgctttattttttttctccgtACGCAGTTTTTTTCCACCATGAGTGATCTGACACTTTTTGCCTAATTTTGTTATTTCCGTGTCTCCCCTTAAATCCTGCCCCCGCCCCAATTTCAGATACCGGTATATAGGTGTATTACTGGTCTTTAGTAATGTTGCATTATGATGAAATTGGTGCACAGTGTCTTGTGAACAGTCCACTGTATTAATATATAGGTcttatttgtttagttttttttgtttgtttgctgattAACATGTTATAACAGAGACATTTCAACCCCTCACctcttgttttttgtactttttttgtataattttcaCTGTCATTTAGTAGCTCCTATGATTGCATTCGTTTTCATTTTGGACCTTTTGCCCTTTGTTAAAACAATTTTCTTTAGAAAGCAGAAACCAGAGAGGGCAGAAGATTCTGGACAGCAGGAAAAAGCAGCTCACCACCTTAACACTGACATCTGCTGATGGGATGTGTCATTGCAGCCTAAAGCAGTGAACAATGGCATCTCAGCAGAGGTTCAGAAGCTGTTGGAACATGGATCCACCATCTAATAAGAAATGTGGTTCCGCCATCTAATATGGACGCCATCTAGAACCATCCGTACAGATTTCATGGCACTTCGTAAAACCGGAGGGGTGTGTAACCTGCATGTCCTAAACACCCCTACTGTTAGTTTATGGCCTATGCAATCCTTTGCATCTcttacccccacccctccctcccatttCCCAGTCTCCCTGTAAAAGAGTTCTCAGTAGACCTTCCTGGCTTCTAAATGAAGGTTAAAGGGACAATGTCCAGACTTTTAAGACCATTGTGTTGACCGTCCAGCAGATGGTTAAAATACCCTCTTAAAATGCAGTTCCAGTTGTGGCTGATGTAGCTGATGAAGAGTAGGTCTGTATCGTTCAGAATTCTGAAATGGGTGTAGGTGGATATTGGTAGACTAGTCTCTTTGTCTTTATCTCCTCTCCACTGTAGTCTCTCTTGTGTGTGCATACtagggttttctttttcttttcttttcttccctaTTTTCTAATATTTGTGGCACTGACATCTTAAGTAGTAGTGGGACTAAAAATCGGGGTAGTATTGATTAAAATTAAGGTTTGATTTTATGTGAAGTTGGAAAtctggaaatgtatttttgcaaCATTTAATCGTGGCGTGATTTTCCTCTACACCcccatttttttagttttacaaGAATTGGTTTCTGACATCGCACACAAAGATTTGGAAAAAATTGCTTTGCCCCTTGTAATTAGGCGCttgagttttttgtttgtttgtttgtttttgtttttgtttactttttttattaGAAACAATCATGTTTGTGATGGTATCTTCTGCTATaaagtattttaataaaatCTTAAAGAAGAAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR051638	Family	C-terminal-binding dehydrogenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46029	C-TERMINAL-BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001221	Molecular Function	transcription coregulator binding	Interproscan
GO:0003713	Molecular Function	transcription coactivator activity	Interproscan
GO:0003714	Molecular Function	transcription corepressor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0140297	Molecular Function	DNA-binding transcription factor binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-