Gene detail

Detailed information of KAJ8408785.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8408785.1	SH3 MULTIPLE DOMAIN	AAFF_1.1_unplaced_33	1458165	1515579	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00246030

ATGCCCAGGCGGGTCGTACAAGAAGTAACCGTCCAAGATgttcaaaagaggagaaatcCCAACAAACACTATgtTTACATCATCAAGGTCTGCTGGTCTGATGGATCCACAGAGGTTATATTCCGACGCTACAGCAAATTCTTTGACCTCCAGATGGAGCTTCTGGATAAGTTCCCTGTGGAAGGAGGACAGAAGGACCCAAAGCGCAGAATCATCCCCTTTCTGCCAGGGAAGATCCTGTTCAGAAGAAGTCACATCAGGGACGTGGCCATGAAACGCCTGAGGCCCATAAACGAGTACTGCAGGGCTCTGATCCAGCTGCCAGTCTACATCTCCCAATGTGAGGAAGTCCGTGTGTTCTTCGAGACTCGACCTGAAGACCTCAACCCACCTAAAGATGAACCGATTGGAAAGAAGAAGTCAGGGTTTGTGGAGAGAGCGTCTACTTTCCTAAAGAGAGTAGGAGAGTCCAGCTCTGCCGACCCTCTGCTGCTCGACCAGTACGTGGCCGTCACCAACTACGAGAAGCAGGAGAGCTCCGAGATCAGCCTGCATGTGGGGCAGGTAGTGGAGGTCATCGAGAAGAATGAGTCTGGCTGGTGGTTTGTCAGCTCAGATGATGCCCAGGGCTGGGTCCCTGCCACCTGCCTCGAGGCTCAGGATGACCCAGAcgacttctctctgccaggCGAGGAAGATGAAAAGTACACAGTGATCTATCCCTACACGGCCCGAGATAAAGACGAGATTAATCTGGTGAAGGGCGTGACTGTAGAGGTGATCCAGAAGAACCTGGAGGGCTGGTGGAAGATCCGGTACCAAGAGGAGGAGGGCTGGGCCCCGGCGTCATACCTGAAGAAGACCGACATCCTGACCCAGAAACTGGCTGCCGGCGCCACAGCCCACGCCAGCACCAACGACCTGGACGGGTTCTCCAAACAGAACGCCGCCAAAGAGAACCGGGACAACCAGAAAGACGCGCGCTTTACTCCGTTCCCCGAAAGCAAGCGCAAATTTGGCCTAAGACAAAGACCCCCTCCCCGCCGTGATCTCACCATTCCCCGTGGTGTTAACCTGCCGAAGCCCCCAACTCCGCCTCAGGTGGAGGAGGAGTACTACACCATCGCTGATTTCCAGACCACCATCCCCGACGGCATCAGCTTCCAGGCCGGGGTCAAAGTGGAGGTGATTGAGAAGAATTCTAGTGGATGGTGGTACATTCAGATCGAAGACAAGGAAGGCTGGGCTCCCATCACGTTCATAGACAAATACAAGAAAACCAGCAATGCATCTAGGCCCAACTTCCTGGCCCCCCTGCCAAATGAAATGGCCCAGCTGAAGCTTGAGGAGGGTGCCACCAACAGCTCGGGCCAAGATGACAGCTGGTCCAAGCCACTTCCTGATGAACCATCAACGAGTAACGATTCTGCAGCCCGTCCCAAGTTGAGAGACTGGAAGGCTGGTCCACCCAAGAGCAGCTCACCTGCCTCCAGTGCCTTCTCAGGGCCCCTACCTCCTGCTCCTTCCCTGCCCCCACAGGAAGAAAAACCTGCCCTTCCACCCCGCAGAGAATCCATCAACAAGAGCCTGGAGGCCGAGGTGGTGGAGAAACCCAGGATGGACATACCCAAAGCCCTGCCCCCAAAGCCCCCTGCCCCGGCGGTCATCATGCCCCTGGTCCCCCCTAAAGCGGCCCCATTCAAACCAGAGAAACCCCCTGAGCCCAAGAGAGAGGACAAGAACAAAGCCCTGCACCTCAAGAATGAGATGGGCCTGGAGTGCGGGCACAAGGTCTCCGCGAAGGAGGTGAAGAAGTTTAACCTGAAGCCTGTGGCCAAGCCACCCAAACCCAAGCCCGAGCTGCCAGAGGAGAAACCAGAGGTCCCAAGTCCAGCCCTGTTCATCAAACCGAAGCCTGTGCTAAGGCCCAAACCGGTTCCCATGGCCAGACCGGACGCCTCACCTGATAACAAGCTGGACATAACCAACCTGAGGAGCAAGCTGCGACCCCCCAGGCCTGCCGAAATAGGCTCAGGCGCCGAGGTCAACCAGCATGAAGGGAACTCCCTCGACAACACCATCAATAACGGAAAAGGGAGTGAGGAGCCCAAGTGTCCACCAAAGCAGCAAAACGGTCACGAGCACGAAGGGCCGGATTCACCGAAACCCACCGTGTTCAACCATAAAGAGCCACCGCAGAGGCCTGTCATCGCTCCCAGAAGACCTCCGCCTCCTAAAAAGACAGACCCCGCCAGCCCCACAGAAACCAAAGCCCCCCAGAAAGACTTTCCAGAGCCTAAGCCCGCCGGCCAGCAGAGCAGACCCCCTCCGCCTAAACCAAAGGCTTTTGTGCTGCCTCCCCCCAAAGaaaaggacaaggacaaggagGACCCCAAGCCACGAGTGGCCCTGCCACCAAAGCCTTTCAACAAGAGCGACAAACCGGAACCGCCTAAAGAGAAACTCCCACCTCTCATAAAAGACACGTCCAAAGAGGAGCTGTTCCTGGCTGTGGCTGACTTTGACGGCGACGACCAGACATCAGGGTTCAAGGAGGGGACAGTGTTTGAGGACATTTGGACTGTGGGTCGTCCGTGGGAGAAAGCAGAATTGATGAAAGGCGTGATCTGCAGAAACGATTGGCTGGTCAGTAAATCCCTACAGATTTACTGA

Transcript

AAFF_T00246030

GGAGTCGGTGAGCTAGGATAGGCTGGGAGTTCGGTTCAGGGCAGGCCGATAAGCATACTGCAAGACCCCAGAAAGAAAGCGAAAAGAGAAGAAAGGACTGAATGTGTACAGGATATTTGCAGAGGTTCATATATGTAAATTAAACTGAACACAATACTTTTCCACGTACCAGGCAAACGTAGATCGGAACCACGCGGATGACATAGATTGGATGTGGAAACTTTGCAACTGGGTTTGATCTTTGCCAAGCTggactgttgtttttattgagaTTCGGACGGATTGCACCATGCCCAGGCGGGTCGTACAAGAAGTAACCGTCCAAGATgttcaaaagaggagaaatcCCAACAAACACTATgtTTACATCATCAAGGTCTGCTGGTCTGATGGATCCACAGAGGTTATATTCCGACGCTACAGCAAATTCTTTGACCTCCAGATGGAGCTTCTGGATAAGTTCCCTGTGGAAGGAGGACAGAAGGACCCAAAGCGCAGAATCATCCCCTTTCTGCCAGGGAAGATCCTGTTCAGAAGAAGTCACATCAGGGACGTGGCCATGAAACGCCTGAGGCCCATAAACGAGTACTGCAGGGCTCTGATCCAGCTGCCAGTCTACATCTCCCAATGTGAGGAAGTCCGTGTGTTCTTCGAGACTCGACCTGAAGACCTCAACCCACCTAAAGATGAACCGATTGGAAAGAAGAAGTCAGGGTTTGTGGAGAGAGCGTCTACTTTCCTAAAGAGAGTAGGAGAGTCCAGCTCTGCCGACCCTCTGCTGCTCGACCAGTACGTGGCCGTCACCAACTACGAGAAGCAGGAGAGCTCCGAGATCAGCCTGCATGTGGGGCAGGTAGTGGAGGTCATCGAGAAGAATGAGTCTGGCTGGTGGTTTGTCAGCTCAGATGATGCCCAGGGCTGGGTCCCTGCCACCTGCCTCGAGGCTCAGGATGACCCAGAcgacttctctctgccaggCGAGGAAGATGAAAAGTACACAGTGATCTATCCCTACACGGCCCGAGATAAAGACGAGATTAATCTGGTGAAGGGCGTGACTGTAGAGGTGATCCAGAAGAACCTGGAGGGCTGGTGGAAGATCCGGTACCAAGAGGAGGAGGGCTGGGCCCCGGCGTCATACCTGAAGAAGACCGACATCCTGACCCAGAAACTGGCTGCCGGCGCCACAGCCCACGCCAGCACCAACGACCTGGACGGGTTCTCCAAACAGAACGCCGCCAAAGAGAACCGGGACAACCAGAAAGACGCGCGCTTTACTCCGTTCCCCGAAAGCAAGCGCAAATTTGGCCTAAGACAAAGACCCCCTCCCCGCCGTGATCTCACCATTCCCCGTGGTGTTAACCTGCCGAAGCCCCCAACTCCGCCTCAGGTGGAGGAGGAGTACTACACCATCGCTGATTTCCAGACCACCATCCCCGACGGCATCAGCTTCCAGGCCGGGGTCAAAGTGGAGGTGATTGAGAAGAATTCTAGTGGATGGTGGTACATTCAGATCGAAGACAAGGAAGGCTGGGCTCCCATCACGTTCATAGACAAATACAAGAAAACCAGCAATGCATCTAGGCCCAACTTCCTGGCCCCCCTGCCAAATGAAATGGCCCAGCTGAAGCTTGAGGAGGGTGCCACCAACAGCTCGGGCCAAGATGACAGCTGGTCCAAGCCACTTCCTGATGAACCATCAACGAGTAACGATTCTGCAGCCCGTCCCAAGTTGAGAGACTGGAAGGCTGGTCCACCCAAGAGCAGCTCACCTGCCTCCAGTGCCTTCTCAGGGCCCCTACCTCCTGCTCCTTCCCTGCCCCCACAGGAAGAAAAACCTGCCCTTCCACCCCGCAGAGAATCCATCAACAAGAGCCTGGAGGCCGAGGTGGTGGAGAAACCCAGGATGGACATACCCAAAGCCCTGCCCCCAAAGCCCCCTGCCCCGGCGGTCATCATGCCCCTGGTCCCCCCTAAAGCGGCCCCATTCAAACCAGAGAAACCCCCTGAGCCCAAGAGAGAGGACAAGAACAAAGCCCTGCACCTCAAGAATGAGATGGGCCTGGAGTGCGGGCACAAGGTCTCCGCGAAGGAGGTGAAGAAGTTTAACCTGAAGCCTGTGGCCAAGCCACCCAAACCCAAGCCCGAGCTGCCAGAGGAGAAACCAGAGGTCCCAAGTCCAGCCCTGTTCATCAAACCGAAGCCTGTGCTAAGGCCCAAACCGGTTCCCATGGCCAGACCGGACGCCTCACCTGATAACAAGCTGGACATAACCAACCTGAGGAGCAAGCTGCGACCCCCCAGGCCTGCCGAAATAGGCTCAGGCGCCGAGGTCAACCAGCATGAAGGGAACTCCCTCGACAACACCATCAATAACGGAAAAGGGAGTGAGGAGCCCAAGTGTCCACCAAAGCAGCAAAACGGTCACGAGCACGAAGGGCCGGATTCACCGAAACCCACCGTGTTCAACCATAAAGAGCCACCGCAGAGGCCTGTCATCGCTCCCAGAAGACCTCCGCCTCCTAAAAAGACAGACCCCGCCAGCCCCACAGAAACCAAAGCCCCCCAGAAAGACTTTCCAGAGCCTAAGCCCGCCGGCCAGCAGAGCAGACCCCCTCCGCCTAAACCAAAGGCTTTTGTGCTGCCTCCCCCCAAAGaaaaggacaaggacaaggagGACCCCAAGCCACGAGTGGCCCTGCCACCAAAGCCTTTCAACAAGAGCGACAAACCGGAACCGCCTAAAGAGAAACTCCCACCTCTCATAAAAGACACGTCCAAAGAGGAGCTGTTCCTGGCTGTGGCTGACTTTGACGGCGACGACCAGACATCAGGGTTCAAGGAGGGGACAGTGTTTGAGGACATTTGGACTGTGGGTCGTCCGTGGGAGAAAGCAGAATTGATGAAAGGCGTGATCTGCAGAAACGATTGGCTGGTCAGTAAATCCCTACAGATTTACTGACCTGGCAGGAGTTGCTTCCAACTAGCATATGTTGGAACTGAGGACATTGAAAAGGTTTGGTATGCTCCTGGTTGCTGTGACACCATTTTCTATTTTGCTGATATTTCTCCCTCACATTTACAAAATTCTCCCATTTGAAAAGGAGCATTCTGCTCATCGTATTGACAACAATGCTTGTATCTAATGGATACGTTCCATTGGCCTCCATTGTTTCTCCACTAATGGCACGTCATATGATAACCAATAAAACATGCagtgcatttaaatgtaaaactatagtattgtattttcagaaacCTCAAGGCTTTTGAGTGAAAGCCGCTCTCATATGCCCAGGTCCTAAAAgttcaaatatttaaatgaaagtgCTGGCATTCCAGCAACTTTGACTGGAAATGTTGAAGGTTTTATACGCAAATGTTGTCGCCGTTGCTGTCAACATGTCGTCCGCGCATCCCTTCAATAGATACCTAAAACTTGATATCTGTgtattttaaattcaaattgatTTGGACATAAAGATGTGAAAGTGCAGATTGAGAAGAAGGCAagaaatggaggttaatagtcAGGTACATGATACGTTTGTGATGAAACAGGACAGACattgaaaacaggttgagaacCTTTTCTAAATGGGAAATATTGGAtcatataaattatttatgatCCCTGTTTGTACATGAGACAATCTATGTACTGTGTTCAATCTAACTGCTATGACACTGTTGTAAGGTAAAGGCAAGCTTGTcctcaaatttttttttgttgcttttttccaGACCAAAAATATCAGTAGACAATTTTGAAGCAGCCGAGATCTTATTCCGCAAATTAAAAGGGTTTCTCACGTATTCCATCATATTGAGTTTGTTGCAATGCTGGGTCTAATGGTTTGTGTGCATGGTTGTCCTGTCATCAGTAATGAATAGCATCAATGCGTATTACATTTTAGACAAGGAAagtgattcatttttttttttttcccactgcCTCTTTCACTGCAATGCGTGGTTTTAGCATTGTTGTGGACAAGAGGGGAATAAATGCACTTTGGGAGATTGTAGTTTCAGTAAGATGAACAGGAAGTTATGCGTTTTCATTAGTTTTaggttaaataattaaaatataattcaaAACATTATATACAGGTTCATTCATATTACAATAAGGATGAAGGATCACATAAATTCGTGGCcagaaatattggcacccttgcacatttttcaaaaacctttctctaaaataagttgaaattgacaaaggTATTTGGACTCCACAaatattgacaccctagatttaatatttggtagcacagcctttggcctttgaaaataactgcaatcaagcgcttcctatagccattaatgagattcctacacctctctactggcagtttggcccactcttcttttgcaaactgctccagttctctcagatttgaatgGTGCCTTatccaactgctgttttcagatctctccacaggtgttcaatgggattgagatctggggcctgtctcatgaagcaggattaatgggttagcgagctaactttgggcttaaccctgggtttttagTCTCATGACTGTgactcacttttaaccgggttacatcaccatggtaacttatgccgcaaacctaacctgctctggagtaggttaagttcaggccccctcaccaatcagctctctggaaaatggcctcaccattcCTAGAGAATTGTCTAATCtgaatttttttatatcagagatacagattctccacggAGGGAATAGTGTATCTTTGTAAGCTTCTAGAGCCACATGTCGTGCAAATGCCACTTGTgtaagccatgcgatcactgtgtaGCAAATcgtatgtattgccctatgttTTTTAGCCACCAGTACATGtacgtattctgttggtgatgcggagaacctgagcaaacatctGCTATGAAATGGCAGGTAGCCTACATTAGTTGACTATAGTTATCaaaatttactgttgcatattaagtgcagtgtaattttTTCATAGGATTCCtgagagtgattggtgcaatagattgcactcacattcccatcaccgcagccttgggtgagccacagtcccGAAAACCCAGGGATTTACCAAAAAGCTCtaatttggtctcatctgtcTGCAGGATTTTGGCTTGTTCAGGTGtgttttggcaaactccagccaGGCtttcttgtctctctctcagcagtgaGGTCGTCCTGGGTCTCCTACCATAGAACCCCCTTTCATTGAGTTGGCGACAGATGATGAGAGTTGAAACTATTGTATCTTGTGTCTGAAGGTCAGCTTGAATCTGTTTTGCAATTGTACAAGGTTCTTCCTCCACCATTTGAACAATCCTTCGCTGCAATCTTTGATAAACTTTTCCCTTTTGGCCACGTCCAGGGAGATTGACTTCAGTGTCATGGGCCTTAAACTTCTTGATAACATTGTGCACGGTAGACACAGGACCATGAAGGTCTCTGGAGATGGACTTGTAGCCTTGGGATTGTCCATGCTTGGCTACTATCTTCTGTCTGAGCTCCTCAGACAATTCTctgctttcctttattttctccATGCTTAGTGTagtacacacagtgacacaaaacagcagAATGAGTACTTTTCTCCATTCAAACTGGTTGAATAATTGATTATTATATTGCAGGCACCTGTGACTCACCACAGGTGAGTTCAATTACTAATTAAAGGAGAATCACCTGCTTGAAATCCAATTATGTCTTACAACTTCTAGAAGGTGCCAATAATAAGGTCCAGTCCATTTAAGATTTCTGTGTGGAATAAGCGAAGATTCCGAATTTTAttcagcttttttgttttgttccactgcaaaccaaataaataaatatgtggacaccaaaatatgtttttattttaacaattgtctggaggaaatatatataaatatatatgtgtgcatgcatgcaagggtgccaatatttttgtctacgactatatatatatatatagccacgtctgaaatatgaagaaaatacatttgcagTGTCTGGAGGCATCAGAAGTTCCAGTTTCGTAAGTAACCTATGTTAAGGAATAAAGATTGAAGGCACTCAGATTTGTCCATGACATTAAAAGGTAACAATCCCTCCAGACAAATTTTATCTGATagtatcagtttctttgctctcTGAAAAGCCATCTCTCTTAGTATATTGAATATGAGCAAAATGCCATTGGGTGGCATACTCTGAAAGACATGCTGGAGAACCTTCTCTTGACAGACACCATAATTGTAATCAGCTTTTGTTCTCACTTATTTTGATGAATTTCAAAATACTTCACtgacttttttccccctgtattatttcttttatataaagttaataaacatttcaaatagCTCAAGGCTGTGTGTGCATCAATCTATGAGCTCCAGAGAGATTCTTGCCAAAGCCACGGTGATGGAC

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00018	SH3_1	SH3 domain	Domain	Interproscan
PF00787	PX	PX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452	Domain	SH3 domain	Interproscan
IPR001655	Family	Neutrophil cytosol factor 1	Interproscan
IPR001683	Domain	Phox homology	Interproscan
IPR035477	Domain	SH3PXD2B, SH3 domain 1	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR036871	Homologous_superfamily	PX domain superfamily	Interproscan
IPR037961	Domain	SH3PXD2, PX domain	Interproscan
IPR051228	Family	NADPH Oxidase and PX Domain-Containing	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15706	SH3 MULTIPLE DOMAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016176	Molecular Function	superoxide-generating NADPH oxidase activator activity	Interproscan
GO:0035091	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0042554	Biological Process	superoxide anion generation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-