Gene detail

Detailed information of KAJ8407130.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8407130.1	JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE	AAFF_1.1_unplaced_40	3599692	3618580	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00288060

ACCATGTCCAGAATACGAAAGAACTTGTGATTTTTATGTTTCAAAAATACTAAagaaaaaatactaaaatacatGCACACGACTGCACACCTTGGAGATTATGATCGTTTCCATGACAACTTAAGATATTTCTGGCATTTTAATAGATGCCTATATTTCACGGAAGAGCAACTGGTGAAAGTGAGTTGGATGGATGAGGAAGGGATATTTGCGAATTcataatattttcatttgtgttACTTCCAAACGGGATAGATATATCGTGGTTTGCTTGGAAAGAAATCAAAATGCCATTATTCGCACAGAATCCTTTCGACCAAGATGTTGAGAAAGCGACCAATGAAACCAACACGACAGATGATTGGGGTCTCATCATGGATATCTGTGACCGTGTGGGGACCACACCCAACGGCGCAAAGGAGTGCCTAAAGTCCATCATGAAGCGAGTCAACCACAAGGTCCCACATGTTGCCATGCAGGCCCTGACCTTGCTAGGTGCCTGCGTCTCAAACAGTGGAAGAATATTTCACTTGGAGATATGTTCACGGGACTTTGCCAGCGAGGTTCGTGGCGTACTGAACAAGGCCCATCCCAAGGTCTGTGAGAAGCTGAAAGCCCTGATGGTTGAGTGGGCTGATGAGTTCCAGAAGGACCCCCAGCTGAGCCTCGTTACCGCCACAATTAGGTCCCTGAAGGAGGAGGGTATAACCTTCCCTTCTTCTGGCTCCCAGAGTTCCTCTAGTGCAAAgggccccccccctcctgccgCGAGCAAGCCTACGGACGACGATGACCTGGCGAAAGccatTGAGCTGTCCCTGCAGGACCAGAGGCACCAGCAGCCCGAGACGCGCCCCCTCACCGTGCCGTCCGACCCCccctacaacaacaacagcggCAACAACGGCAAGGACTCCCGCAAGGTGCGCGCCCTGTACGACTTCGAGGCTGCCGAGGACAACGAGCTAACCTTCAAGGCCGGCGAGCTCATCATCGTCCTGGACGACAGTGACCCAAACTGGTGGAAAGGAGAGAACCACAGAGGCGTGGGCCTCTTCCCATCCAACTTTGTCACGACCAACCTGAACGCAGAGCCCGAACCAGCAGCGTTTGTGGAGAAGTCCCCTCTGCCTGAGGAGCCGAGCCTAGAAACGAAAGCGGAGGCTGAGCCAGTGGTTATAGATGAGGAAAAGATGGACAGAACGCTGCATTTGCTACAGAACACAGATCCTGCCGATGCTGAACCTGCCTCCACAGAACTTTTCCAACTAGAAGATGCGTGTGGACAGATGAATCCACTGATTGATGAGAAGCTTGAGGAGATTGACAGaAAGCACTCAGAGCTGTCAGAGCTGAACGTGAAAGTCCTGGAGGCCCTGGAGCTGTACAACCAGCTAATGAACGAGGCGCCGATCTACTCGGCCTACTCCAAGCTccaggcccaggcccaggcccaggcccaCTACCCGCCCACATCAGCGCCCGTCCCAATGCAGggTTACATGGGCCAGCCTCAGAGCGGGGCATACATGGCATCAGGGGTGCCTCAGGGCCCCCCCGGACCAGCTTACGCCATGGGCCCCGACCAAGCCGGGCCCCTGCGGTCCCTTCCACCCAACGTCAACACACCTGCCAGCAGCCAGCCAGCACAGGCCCCCTACATGAGCAGCGGGGTGAACGTGGCGTACATGAGCCAGGCGCCCGCTGGCCCCCCTGCGTACCAACAGCAAATGGGCGTGCCCATGGACATGTCGGCCTATCAGAACACTAACCCTAACATGACACCAGCCTCCTATCCAATGGCAGCTCCCGCTCACCCTGGCCCCCAGCCACAGGCCTCCTACTACCAGCAGCCTCTTCTCTAAAACCGGTGCAATAAAGTTGGCCTATAGTGCATATCCCtgtttcatacacaaacaagaGCAATTTAGGTTGcatgattcttttttttgttttgttttgtttgttatgtCTGTTTTCACCACGGTTTGGAGAGTGTGCTGGTGTAGTTTGCTGGCGCAACAGTCGGTCCAGCGTCCAACAGGAAGAGATATTCTGCCATCCGTTATTGGAGAGAGGAACCGTCAGTGCAGAGAGAGGTCTTATCTGAAATAAGCTCCAACAATGTCGTAGAGTAGTGTAGTTTGAGCTGTGTCTTAATTGTACTGCCTTTCTTCGCCTCGGTTTTTTAAACCTGCGTGTAGAAAGTAGAGGGAGCTGCTCCTTTCTGAGTGGAATGTTCACACTGCAAATGTGCAAGTCAATGAAACGTTCTGTTAAATttgggttgttgttgtttaggaCATGTTAGGCCGGCAGCATTGGTTTTACGTTCCTTTGTGCCGAACGCTATGGAGATAAGGTAACGATTCTATGGTGGGGGGGAAACGGTGTTTGAGCAAAATTAGTGCAGGGCCTATCATATGCAGATTTCATTCCAATACAAATATAGGTACAGATGATTGATCAAATGATTGCATCTAAATCAAAAAATCTGTGCCAGTATtcatcaaaaatcaaaaaatcaAATGAGGGCATATGTCAGACTCAATGGCAGTTTAGGGCCATGTTGCATGAAAAAGCAGTTGGATGGATTCATGTTTATTGTAAAGAGAGTAATGCCATTATTTAAATCATCGATGTTGAGGGCCATTATTCACATGGACACAGAGGTAACAAGTACAGCGCACAGCCCTAGCGTAATCTGTTGGTGATATTCCTACGTGTTTTTTGATGCACCTTTCATTTGTGTGCCAAGACTTCACAGATATCTAGGGAAGGGTCCACCTCATCAGTAAGAATCTGATCTACATTCTAAGAATAACCTTATTGGAAGTTGAACATGGTCCACTTAGTTATTGATGGTTGCAGTTTAGTTAGGCTGGTatagtttttatgttttttaatgttgctgTAATTAATGTCTGTCTGCTTTTCACTTGTAGGACCTCTGTGAAAAAGATGGATGTTGTTGACCATTGGTTCAGATAGCTACAGTAGGGAAGGACTCTTAATATGCAACAACTAGTTTTTCTCTGCACTGCGTGTGTCGGAAGCTGTAGTTAggcttttaatttaatatttgtaaatTGCATCTCTTGTACCCCGATTTGTATTTTatcttaaatattattttctttgtgaaaaaaatgtttgtaataAGGTCCTCCTTAAAtggttttgaaatgtaaaatatatctttaatttttttccattttccatcttTTTGTGTCTTATCAAAAATACAACCAGAGCGAACTTGGCAACCACACGGACTAAATGCTGACTAACAGTTGAAATGTAGTCTTTTTCAAagttaagaaagaaagaagataCTAATCCAATAAACCGACCTAGGGTACTATTAGGCTTACAAATGAAATGAGTATGAGTATACTagctttatattatttttttatttttttgggggggggggaagatgaGGCCCATGACCAGAGTTTGATGGATTcttactgtgtttgtttgtggctGGTTGAGTTATCACGGTATACATGAGGAAATTGTGTACACATTGTTCTCTTTACCTGTCACATGAAGTCTATTGTATATTAGATGTAAGATATCTTGCATTGTTGGTATTGCACCTTAACTTTATAAACATTTCTTTGCCACTGGATGccttgttttctttaaaaatgaaaataaaaacaaaaaaacaaacaaaaaaaaaagaattcattTCAGAAGCTGCTGTATATCTAGGACTATATATATAGAGGGACGTTTCTATCCAGTACTGGCATATTCTCTTATAATCCATATTTTATAACATCAAGGTTCTCTATATCTTGTGTTGTCATTGTAAAATGTTCCATTTGTAATAACcagagaataataataaaaaacctttaaa

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3
Ubiquitin Family	UBD\|Alpha-Helix\|VHS

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00018	SH3_1	SH3 domain	Domain	Interproscan
PF00790	VHS	VHS domain	Repeat	Interproscan
PF02809	UIM	Ubiquitin interaction motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452	Domain	SH3 domain	Interproscan
IPR002014	Domain	VHS domain	Interproscan
IPR003903	Conserved_site	Ubiquitin interacting motif	Interproscan
IPR008942	Homologous_superfamily	ENTH/VHS	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR050670	Family	Signal Transducing Adapter Molecule	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45929	JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0030139	Cellular Component	endocytic vesicle	Interproscan
GO:0035091	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-