Detailed information of KAJ8405888.1 in Aldrovandia affinis Gene info
Gene IDAnnotationScaffoldStartEndStrand
KAJ8405888.1PRE-MRNA CLEAVAGE COMPLEX IIAAFF_1.1_unplaced_4642480664264921-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04818CIDCID domainRepeatInterproscan
PF11526CFIA_Pcf11Pcf11, Clp1-interaction domainDomainInterproscan
PF20827PCF11_chargedPCF11, charged regionDomainInterproscan
PF20845Pcf11_helicalPre-mRNA cleavage complex 2 protein Pcf11, alpha-helical domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002014DomainVHS domainInterproscan
IPR006569DomainCID domainInterproscan
IPR008942Homologous_superfamilyENTH/VHSInterproscan
IPR021605DomainPcf11, Clp1-IDInterproscan
IPR045154FamilyProtein PCF11-likeInterproscan
IPR047415DomainPcf11, CID domainInterproscan
IPR048830DomainPre-mRNA cleavage complex 2 protein Pcf11, helical domainInterproscan
IPR048832DomainPCF11, charged regionInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15921PRE-MRNA CLEAVAGE COMPLEX IIInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000993Molecular FunctionRNA polymerase II complex bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005849Cellular ComponentmRNA cleavage factor complexInterproscan
GO:0006369Biological Processtermination of RNA polymerase II transcriptionInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0031124Biological ProcessmRNA 3'-end processingInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP