Gene detail

Detailed information of KAJ8402445.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8402445.1	NUCLEAR RESPIRATORY FACTOR 1	AAFF_1.1_unplaced_64	4419595	4437121	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00369340

ATGGCCACGTACGCGGACCAAGACATGCTGAGCGCCGACGATGACTCGCCCTCCTCCCCCGACGACGACATCTACGACGACACCGACATCCTCAACTCCACGGGGCGGACGATGTCACCGCACACCTGGCGGCCGCAGGTGAGCCTCCGCCCTCCGACCGATCGAGACCGCCCTCGCCGTCCGCATATGTCCACCGCAGGGCAAAGCCCAGTAGGTATGGCAGCAGCTGCGGCCGTGTCGACGGGGAAGAAACGGAAAAGGCCGCACATCTTTGAGTCCAACCCCTCCGTCCGGAAGAGGCAGCAGACGAGGCTACTGCGGAAACTGAGAGCAATTCTCGATGAATACACCACCAGAGTGGGACAGCAGGCCATCGTACTGTGCATATCTCCCTCCAAACCCAACGCAGTGTTCAAAGTGTTCGGTGCTGCCCCGTTAGAGAATGTGGTGAGAAAGTATAAGGGCATGATCCTGGAGGACCTCGAGGGGGCGCTAATGGAGCACGCACCCCCTCCCCGTGAGCTGGGCTCCGAACTCCCGCCCCTTACCATCGATGGAATCCCCGTCTCTGTGGACAAGATGACACAGGCCCAGCTGCGAGCGTTCATCCCGGAGATGCTCAAGTACTCGACGGGCCGGGGCAAGCCCGGCTGGGGCAAAGAGAGCTGCAAGCCTCTCTGGTGGCCGGAGGACATCCCGTGGGCCAACGTGCGGAGCGACGTCCGGACAGAGGAACAGAAGCAGAGGGTCTCATGGACGCAGGCCCTGCGGACCATCGTGAAGAACTGCTACAGGCAGCACGGCCGGGAGGACCTGCTCTACGCCTTCGAGGACCAGAACATCCCCCAGCAGCACGTGGCGACTGCCACCACTCACAGCATCGCCCACCTCGTGCCCACGCAGACCGTGGTGCAGACTATCAGCAACCCCGACGGCACTGTGTCCCTTATACAAGTGGGAACCGGAACGACGCTGGCGACTCTGGCTGATGCCTCGGAGTTGCCAACTACCGGTACCGTGGTCCAGGTCAACTACTCCACGGTGATGGACGGAGAGGTGGAGCAGAATTGGGCCACACTCCAGGGGGGAGAGATGACCATCCAGACAACCCAGGCTTCTGAGGCCACCCAGGCTGTGGCTTCGTTAGCAGAGGCGGCGGTGGCATCCCAGGAGATGCACCAGGGAACAACAGTTACCATGGCGCTGAACAGTGAGGCAGCAGCCCATGCAGTGGCGACGTTGGCGGAAGCCACCCTGCAGGGGGCCGGACAGATCCTCCTGGCGGGGGAGACGGCGGCCGCAGTGGGAGCGCTCGCCGGGGTGCAGGACACCAGCGTAAAGCTTCTGGGGGAACGAGCCTCAAAGGAGCAAGCCTCCGGGGCCTGCGCGTGTAAGGTGGACCCGCAGCGGAAGGCAGGAGTGTCCAGAACCCGGGGCTCTGACCTCCCCCGCCCTCCCCGCGGCCGGGACAGCTTGTGCGGACCATGTGACTGCAGTAATCCGCAGGCAGTAAACAGCAGGGCAGGGCTCAATCGGCCCATTGTTCCGCAGTGCAGACTCAAGCTCCTGCAGCCCTCCACtctcgctctgcagcccacactcgtacaggaccagccaaatacggGCCTTGTGCAGATCCCTGTCAGCATGTACCAAACGGTGGTCACCAGCCTCGCCCAGGGGAACAGGCCCGTGCAGGTCGCCATGGCGCCCGTCACCACACGTATAGACAACACTGTGACCCTGGACGGACAGGAGGACGTGGAGGTCGTGACcttggaacagtgacagtgagggGCCGCTTGCCACCCTCCCGGTCTCTCCGACTGGGAGTCCGGCCCACCGACAAGACATTAGCCGAGGGTGTGAGAGGGCTCCAAATGACGTAACTTGTACTTGCACAATGTAAAATGGACAATTAACATGGCAGGGATGAAATTAATTTATCAATGCATATTGTTTACTGCGTAAAAAGGATGAGTTTGTTTTGGGGattctttttgtatttcttctgctttttatttgctttttttttttttttttttttaaccaggtTGGGGTTGTGAAGTTGAGGTTGTGAAGCAAGTGATCAAGGCAGGGATATAAAGGTATTTATTTCACGAGTATGAAACAGACCTGCAACAGAACAGGGGAGAGAAGCAGTTGATTCAGCACGCTGTCTGAGGTCGTTATAATACAAATGCTTttagttttgttctttttttttttttttttttttttttttttatcttgtaCCGTTTTATGGGGTTTCGTTTAAAGTGAAAATGCAATTTCTAGTCTGTGCCACGTTCAAATGAAAACGTTTGCTTTGTGCACTTGGACTTCATATAAGATTCCTCAGGAACCCATGTGTTGACTTGCTAATCAGCAGGTGAAAAACCTCACATTTCTGACCAAAAATACTGCCCCTTGTGTGACAATTTTCATGTTAAACAGTTGAGTATTATGGTGCAAAGAACGCCCCCAATTAGTTTTCATATTGTGCTCATATTTTACCCTTGTCTAGTTGCTCCAGAAAAGGTTTCTTTCAGAAAACAAAGGACAGTGAAGAGTAGGATAAAGATGACATTTTATTCACTGCCAAAATGTGGATCCCAAGAAATGAGTGGGATTTGTTCATTGCCATGACAGATgacttatgtattttttttttttttttttgccgatCACTCCAAATTGGCCCCTCCAccttagggtgaccagatttgAGCAGTTCTAAAGCAGGACTAGGAAGTATCATTTCCTCTCTCAGTGGGATAGGAATATACAAAACGAAGTGGCAAAGTCTGTTAAGATTGACCAACGCTCAAACACTGAGGTTCAGGGTTCGAGCCCAGCCAGAACAAATGATTCAAACTGTATTCAACTGTGGTATAAGACCATTAAACTTTCCATGTAATTACAGTAATAaaggtgtgtgtgaaatgtcttTAATAtgcttatattattattcaaattctGCCCTTGTGTGTGGAACCCTTAATTGCTGCAttcagctacaggtaactg

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	Nrf1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10491	Nrf1_DNA-bind	NLS-binding and DNA-binding and dimerisation domains of Nrf1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019525	Domain	Nuclear respiratory factor 1, NLS/DNA-binding, dimerisation domain	Interproscan
IPR039142	Family	NRF1/Ewg family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20338	NUCLEAR RESPIRATORY FACTOR 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-