Gene detail

Detailed information of KAJ8402415.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8402415.1	CYTOKINE RECEPTOR	AAFF_1.1_unplaced_64	3516501	3586237	+

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00369040

ATGTCTGTGATTGTGGACGTGGACGGAGAGAGCGAGTACAACGCCTCAGTGTCCACTTGGACCAGACTGGGGAACGGGGGAATGCTCACCTACATCACCTTCATCATGTCCGACGACGTCCCAACTCATCCTCCCCAAAATGTGTCCTACATCGGCCTAACTCCAACCTCCGTTGAGGTGATGTGGTACCCCCCCTCCCAGCCAAACGGGATCATCCAGTTTTACACTATTTACTACAGCGACAATGTCACTGTGCATACTCAGAAAGTCACCGTATCTGGTGGTGCGTCCCAGGCCCCTGACACCCAGCACTCCTCCGTTATCGACGGCCTGGACAGAGGGAGCTTGTACAGCCTGTGGCTGAGCTCCAGCACCTCCATGGGAGAGGGTGACGTGAGGAGTGATGTCATCAAAGTGTATACTATGGAGGGCGTTCCGGACGGGCCCATCCACAACCTGACCGCCCAGAACTTCTCCTCCACCGCCATCATCGTGAGCTGGGACCCGCCCTTGTCTCCCAACGGCAAGGTCTTCTACCACCTCAGCCTGGAGGAGAGGCACAGGAACGAGCTGAGCTCCAACGAGACCATCAGAGAGACCACCAACGACCAGGTGACCCTCTTCACAAAACTGCGCAAGTACACCGAGTACGTGCTGAGGGTGACCCCAGCAACCTCCGCTGGTCGCTCGGAGAACAGCACCACCATGCTGTACCTCAGGACAGATGATGACGTCCccagctcccctcccctcatgagcTCCAGTAAGaacctgtcctcctcctccatccatCTCTCCTGGCTCGCCCCCCTCGAGCCCAATGGGGTCATCACCGACTACACCGTGGTGCTTCAGGGGCCAGGGCTCGCCGACACCACCGTCACCCCCAACACCAGCGTGACCCTCTCGGACCTGATCGCCTTCACGCCCTACAACGCGTCCATCGCCGCCAGCACCCGGCGGGGGATTGGCCCCTCTCTCATCCTGCTGCTGCACACGGATGAAGCAGGCCCCGCCTCCCCGCCCAGGAACCTGAGTATATTGAACCACACAGCGGACTCTGTGTGGTTGACCTGGGAAGCCAGTGTGGAGCCCAACGGAGTGGTGCAGTTCTATGGCTTCAGGGTCCTAGAGCTCCAAAGGCAGGTCCTGACCTTCCAGAACTCCTCCGGACCCTCCACCCAAGCCCAGCTGACTGGATTCAAACCCTTCCGCGCATACCAAATCAGCGTCTGCACATTCACCAAAGTGGGGAACGGAAATATGTACAGCGACCCAATCACCTTTATGACAAACGAATCAGTTTCGGAAGCTGTTGGAAATCTCTCCTGCTATGGGTGGAGCTGGGACTCTGTGTTCCTGGAGTGGGAGGCACCGGCCAATCCCAACGGAGAGCTCATGCATTACCTGATCCGGTACGGAGACCAGTGGGAGGAGGAGCTAGGGCCCGACATGCACCAGCACACCATCACCGGGCTGTGGGCTGACACCAATTACACCTTCCTGGTGATGGCGGTCAACTCGGCAGGGCCGGGAGAAGGCGTCTCCTGCACCGCCAGCACACCGCGGGAGTCTGTGCCAGGCCCTCCCCTCCACCTTAACGTGACCGAGGTCCAGCCCACCAGCGTGACCCTGGGCTGGAACCCCCCGGGGAGGGCCCAGGTGCTGGTGTACGCCAACGCGTCCGGGGAAGCCGAGGAGATCACCCTGCAGTCCCTGCGCAAGTACAGGCAGTACCGCTTCAGCGTGGCGGCCCGCACCAACATCGGCTACGGGAACTCCTCCCAGTGGGTCCCGGCGCACACGCTGCCAGGCGACCCCGACGCCCCTCCCCACTCCATCTTGGTGACTCCCTCCTGCTGCAGCATGAAGATCGAGTGGACGGAGCCAGAGCAGCTTGCAGGCCCCACGTCCTACCTCATCGACATCATCTCCGTGGATGGGTCGGACTCTAACCAGACGCTGGTCAGGAGACATGAGGAGATCAAGACAGTGGTGGTGTCCAACCTCACGGCCTACACCTTGTACCTGGTGACGGTGACGGCCTACACAGGGAACGTGAGCGAGGCCAGGCAGAACGGCAAAGCCAGCAGTCCTGTGTACATTAGAACGCTGGAGGATGAGCCAAAAGATCCCCCCAAAAACTTGACCCTGCAGGTGTTCCCAGAGGAGGTGACCAGGGTGTATGTGACGTTCTCCCCTCCGGCCGAGCCAAACGGGAACATCAGCGCCTACCAGGTGCTGATCTTCAGAGACGGCAACTTGGATTTCCAGATCCCCAGTCTCCGCGTCACAAAGAATAAAAATCAGACGATGACTGCAGTCATAGAGGGCCTTAAAGGCGGCTTCAACTACAGCATACGGATCGCTGCTGTCAATGGAGCTGGCTCTGGCCCCAGTTCAGAGGTTCAGGTTACAACTGGAATTAAAGCACCACCAAAGCCGACTGAAAGACCCACGGCGGACACTGACAAACACGGAGCCGTCATGGCGACCTCGAGAACCATCACCATCCTGATGCCTGTGTGCTTCTTCTCTGACCAAAACGGGCCCATTCACAGGGTGCAAGTCATTGTCGCGGAAGAAGCAGTAATGGATGACGGCAACTTAACCAACTGGAAAAATGCCTTCAACCACAAGCCGGCACCCTATATCACGGATGAGGGCTTCCCAAACCCTGTCTGCTTCAAGGACGTGGGCCGCAACGTTCCTTACGCGGACACTTACGTTATTGGGGCTGATGACGGCTGCATGGCGCAAGAAGATGACAACGTCCTCTGCAACGGGCATCTTAAACCAAAAACCCATTATGTATTCAAATTTCGAGCGACAAACATCCAGGGTCAATACACTGATTCTGACTTCTCGGAGCGCGCAAGAACAACAGACGACCGTCTGTTGGATCGAGACGAGGAGATAATCCTGGGGGTTCTGCTGTCCTTCTTCCTCGCTGTCCTCCTCATAGTGATCATCTGCGCATCTGTACGAATCCATCAAAAACAGAAAGAGGGCGGGACTTACTCCCCGCGGAAGGCAGAGATCATTGACACCAAGTTCAAACTGGACCAGCTGATCGCCGTGGCCGACCTAGAGCTGAAGGATGATAAGCTGCACCGacCTGTTAACAAGAAATCATTCCTGCAGCACGTGGAGGACCTGTGTGCCAATGACAACATCAAGTTCCAGGAGGAATTCTCGGAACTTCCCAAGCTGCTCCATGACCTGGCGACCTCGGACGCTGACCTGCCCTGGAACCGCTCCAAGAACCGCTTCACCAACATCAAGCCTTacaacaacaacagagtGAAGCTGCTGTCGGAGCCCGGCGTGCCTGGGTCTGACTACATCAACGCAAGCTTTGTCTCGGGGTACCTGTGTCCCAACGAGTTCATCGCCACCCAGGGCCCCCTGCCCGGCACCGTGGCCGACTTCTGGAGGATGGTGTGGGAGACCCGGTCACGCACCATCGCAATGCTCACTCAGTGCTTCGAGAAGGGCCGGATTCGATGCCACCAGTATTGGCCCGAGGACAACAAACCGGTCACGGTGTTTGGAGACATTGTCATCACCAAGCTAAACGAGGATGTGCTTCCTGACTGGACTGTCCGTGTTCTCAAAGTGGAAAGGCATGGCGACTACATGGTGGTGAACCACTTCAACTTCACGTCCTGGCCAGAGCACGGTGTTCCTGAGTCCAGCACCACCCTCATTCAGTTTGTGAAGTCCATTCGGGCCAACAGGGGCCACGACAACACCACCATCGTGGTCCACTGCAGTGCGGGCGTGGGCAGGACCGGCGTCTTCATCGCCCTGGATCACCTGGTCCAGCATGTCAGCGACCACGACTTTGTGGACGTTTACGGTCTGGTGGCGGAGCTGCGTAGCGAGAGGATGTGCATGGTGCAGAACCTGGTACAGTACATGTTCCTACATCAGAGCACTCTGGACTTGCTGTCAAGTAAAGGAAACAGTCAGTCAATCTGGTTTGTCAATTATTCAGCTCTGGAGAAGATGGACTCTCTGGATGCCATGGAAGTTGCACTTCTGGACTGTCAAAAACAGGCCGTTCGAGGCAACAGCACCATGATGGACCTTTTCGAGACCAACGCGTATTTCTTCAACGATTTGCGCTATCTCGATGGAGATAATGGACCGCTTCAGCACCTGGAGATGGCAGAGGTGTCCCCCTTGTATCAGGGGAGTGATAGCCCCCTGTCACCTGGCCACGATCAGGTTCCATCCGAGACTGGATGTGACAGTAGCGGGGAGGAGCACGTTCTAGCCCCCCCGGGTCTCCAGCCGCACTGTCCGGGACAGTGCCTCATCTGGGCTTGTAAGACCTGTAAGAGGAAGTCCGCCCCGACCGACAGACGGAAAGCAGCTACTCTCCGGGAGAGAAGGCGGCTCAAGAAAATTAATGAAGCATTCGAGGCATTAAAGAAAAAGACTGTGCCCAACCCGAGTCAACGGCTGCCCAAAGTGGAGATTTTACGCAGCGCCATAAATTACATCGAGAAACTGCAGGACCTGTTGCACACGTTGGATGAGCAGGAGAAAATTCAAGAAAAAGACACATTTAACTATAGCATGAAAGAACATCATGTCTTCTATGACAGTGCCTGCCTGTCATCCCCGGACGACTTGGACCTGGGTGAGCTGGCCGGGTCTGAGGAGGATGAGCACGTGCGGGCGCCGAGTGGCCACCACCAGGCGGGCCACTGCCTGATGTGGGCCTGCAAGGCCTGCAAGCGCAAGTCCAGCACGGTGGACAGGAGGAAGGCGGCCACCATGAGGGAGCGCCGGCGGCTGAAGAAAGTGAACCATGCCTTCGAGACGCTTCGCAGATGCACGTCCTCCAACCCCAACCAGCGGCTCCCCAAGGTCGAGATCCTGCGCAATGCCATCCAGTACATCGAGAGCCTGCAGGACCTGCTCCGGGAACAGGTGGAGAATTACTACGGCCTGCCCGGGGAGAGTGGTTCTGAGCCCGGAAGCCCCACGTCAAACTGCTCCGATGGCatgATTGGTTGCAACAGTCCTGTTTGGTCTCACTTGGGCCAAGGAGCCATGTACAACCATGAGATACACAATGTGAGCTCTGTGGGGAGGGCCCCTGCTGTGTCCAGCCTGGAGTGCCTGTCCAGCATCGTCAACCGCCTGTCCTCAGTGGACGCCGTTGGCCTGGCGGGGCCAAGAGACATGGTTACTTTATCCCCTTCCAGCATGGATTCCCAGCCCACGACTCCTGAATCTCCATCCACCAGGCCTCACGAAATACTGAAAGGCCTCACCTACGACATGTGGTTCTGCTGCACGGTGaggctctgctgctgctgctgctgcatgagtagctgctgctgctggcggcGCCGGGCTGTCCTCAGCTTCTCGAAGCGGGCCTCCATCTCCTCCAGCACCTTGGGCGTACAGGAGCTGGTCCCCCCTCTTCAGACCCCCATGTCTCTCGGCCACGCCCCCGGGGATGATGCGTGA

Transcript

AAFF_T00369040

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	bHLH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00010	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF00102	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan
PF01586	Basic	Myogenic Basic domain	Family	Interproscan
PF12232	Myf5	Myogenic determination factor 5	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000242	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR000387	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR002546	Domain	Myogenic muscle-specific protein, N-terminal	Interproscan
IPR003595	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR011598	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR016130	Active_site	Protein-tyrosine phosphatase, active site	Interproscan
IPR022032	Domain	Myogenic determination factor 5	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR036638	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan
IPR050713	Family	Receptor-type Tyrosine-protein Phosphatases/Ushers	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46957	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:1990264	Biological Process	peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-