Gene detail

Detailed information of KAJ8401673.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8401673.1	F-BOX ONLY PROTEIN 3	AAFF_1.1_unplaced_68	727923	783872	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00376440

ATGGACGCAGAGCCTGTGACAGCAGcggtggagggggtggaggggttggaggaggaggaggagggggcgccCGCgacggcggaggaggaggaggggtgcgCGGCCCTGTGCGCGGACGGCCCGCCGGAGGGCGAGACGGTGTGCGCAGCGCTGGCCCGCTACGAGGCCACCCTGCGGGATGCGGTGCGCGAGATCCGCGTGGACGTCAGCGCCTTCAAGGCGGGCGTGGAGCGGCGGCTGGAGGAGTCGGCCCGCGCCGAGGGGCCCCTGGGCCGCGCCGTCGCCCAGCTGCAGCAGGAGAACCGCCAGCTCCGCGGCCAGCTGGAGGTGCTCACGCGCCAGCTGGAGGCCCTCACGGGCACGGTGTGCGACAGGAGCGCCCTGGTGGCCGAGAGCCGCCCGCACGACCTGCCCCTGGTCCCGCCACCGCCCGCCCGCCGGGCGCCCCGCTCGCCCACCTCCCCCACCGGCAACGCGCCCTCCCCCGGGGCGGGCCCGACCCCGGCGCTCTCCCCCACTGCCACCCGCTTCTCCAGCCGGGCAACCTTCTCCCTGTTCAGCAAAACCAACAGTGTGGAGCGGGAGGAGCCTATTGAGGTCGACCCAGCCCCCATTGCCACGGTGTTAGAGAACGGGCACCAGTCAACGTCAGAGAGCTCAGAAGTGGGAACGCCTCATGATGACCTTCCGCAGGAGCACACAGCCGCCGTGTCGATGGGGAGGCCACACCTGCCCATTACCGCCACGACCAAAATCGCTGAGCCCTCCACTGCTGTCACGGCGATTAACACCCAAGAGTCGCCAAACAGTCCTGTCAGACCCCCACCCTCTGCTCTGACAGAGGTGGAGCCACCTAGCCAATCAGCAAGTGACGCTCCGCCCCAAACAGTGCCAGAGCCCATCATCGCACCAGTGCCCGCAGTGAAGTCTTGGGCCCCAAGTCCTGTGAGGGCCATGGGCTGCCCTCGAATCCCAGATAAAACCCCCTCGGTGCCTTCCAAGTCAGTGAGCTACTCTGGCATCAGCCCACCCAGCATCGACAGGGACGTGGTCGACGGGGGCGGGCAGCTGTCCTTCGGAAGGGTTGTGGAGCGGCGGCGGGAGCTGGTGAGGTCACAGACGCTGCCCCGCACCCTCGGACCCCAAGCACGCCGCTCCATCTTTGAGAGGCTGGACTCAGACCCCAGCagGCCCAAAGCCATGGACCCCAAGCCCAAGCTGAAACGCTCTCAGAGCTTCGGGGTGTCCAGCGCCAGCAGCATCAAGCAGATCCTGCTGGAGTGGTGCCGGTCCAAAACCATTGGGTACCAGAACATCGACATCCAGAACTTCTCCTCCTGTTGGAGTGACGGCATGGCCTTCTGTGCCCTGGTGCACTCCTTCTTCCCCATGGAGTTCGACTACAACACACTGACGCCGGCCAACCCCAAGCACAACTTCGAGGTGGCCTTCGGCACGGCAGAGAACAAGGCAGGCTGTGACCGGCTCATCGAAGTGGAGGACATGATGGTTATGGGCCGCAAGCCAGACCCCATGTGCGTCTTCACCTACGTCCAGTCCCTCTACAACCACCTCCGCAGAGGAACCCGATTCTGCGTGGGATCGTCTGGCGGTCTGAGGGCGGTACGGAGTGTCTCGCCTCGTCACACTGCCACGAGAGCAGACACCGGCAGGCTCCGAAAACCAGTGCGTCAAAACCGAATCAAGCTCATCGCCTGTGCTGCCACGAAGGCCATgtccttcaACATCTGCCGGACAATGCTACGGATGTTCTATGAGTCTGCAGTGGCCAGTGCCTTCCTGTTTGCTGTCGTGTGCTGGGGCAGCGGGCTGAGGGCAGCGGATGCCAACAGACTCAACAAACTGATCCGCAAGGCCAGTAGCATTGTGGGGGTGGAGCTGGGCTCTCTGTCAGGACAGTGTCAGAGAGGAGGATTCTGTCCAAGCTACGTGCTATTCTGGACAGCGTCTCCCACCCACTCCACGACCTACGCCGCGGCAGTCAATCGCGACGTCACACTTGCGCCTGAGAAGCTGGGTGGGAGAAAGAGCCGCGTGGACCCTATGGCGCTCTTCATGGAACCAGAATTCTTCAGCGTCCAGAAACTGACAGACGACAGGGAATTCGATTTTGTCTTATCCAAAAACAAGGACCAATTTAAAGaTTTGATTAGTGAGTCTGCGTCGTCGTCTCTCAAGCCAGACAGAGCAGGGCTCGCAGAAGGTcaaaggaagagaaagaggaccATCTTCAGTCGCGCGCAATTATCAGAATTGGAGCGGGCCTTTGTCGTGACACCATACCCCGACATTACACTACGGGAGAGATTGGCGGCTCTCACACACTTACCTGAGAGCAAGATACAGGTGTGGTTCCAGAACAGACGAGCCCGGAGTATAAAAAGCGGGCGACTCAGCAGACCGACGAAGAGGAGTCCTGTAAGAGAGGGGGACAAAACCTGCCTCCCCCGACCcagcctcccctccctctgtcccacaTTCGCCCCCGCCAAACTGGGGGAGCTGGGCGGGGGGCCGGAACAGTACCAGGCCGACGGAAGACGGCCCACCTACTCAGACTGGGTGCGGCAGTACAGCGGCACCGCTTCCCATCCCCTCACGCAGCCCCCCACGCAGCCCGTCTCCCCTGAACTTCCAAAGTCCCTGCTGTGGGAGGACGGCCATCGCCCCCACTCGGGACTCCACGCTCCCCCATTGGCGGGCGCGAGGCAAGTCCGGCCCGCGCAGCAGAGATGGGACGAGCTCAGCCAGTTGTGCACCGCCAGCCCGGGGTACAGGCGCCCCAGGGCCCAGCCTCACTCTGCCACCCAGGGCAGGTTTGGCTGCGCCTCCATAGACCAGGTGGTTCCTACCCACCCACAGCAGATGTACTGGGACATGCCCCACGGGCAGGACCATCCCGCAGTGGGACCCCAGACCTCGCTCGGGTACATCTCGGACCTGATCTACAACGCTGCCGTCGTCACCAATCTGCTGGACGTCCAGCAGACCCGCTACCTCTCGTCGCGACCCGAGAGCAAGGTGCTGgagacagtgggagtgtttGAGGCGCCAAAGCAGCACGGAAAATATGAAACGGGACAGCAGCTATTCCTGCACAGTGTGTTTGGATACAGAGGTATAGTGCTTTTCCCTTGGCATGCTCGACTCTATGATCGTGATGTCACGCCCCCCACTGCTGAAAGTAAGCCAGAGCCCCCCGGGGCACACGGGTCGAAGGAAGTTAAGGGAAAAACGCACACGTACTACCAGGTCCTGATTGACACACGGGACTGCCCACACATATCTCAAAGGTCGCAGACCGAAGCGGTGACCTTCCTGGCCAATCACGACGACAGCAGGGCCCTGTATGCTATTCCAGGCCTGGACTATGTGAGCCACGAGGACATCCTGCCCTATAACTCGACTGACCAGATTCCCATTCAACATGAGCTGTTTGATTTTAACTCCATCAGAATGTTCAACCCCAAAATCAAAATAGTTCTGTACAGTGTCTGCAAGCTcgacagggTTCCCCCATTCATCCCGAGGGACACCCTGCGGGCGTGGCAGGAGAAGAATCACCCCTGGCTCGAGCTCTCAGACGTGCATCGGGAGACCACGGAGAACATCCGCGTCACTGTCATCCCCTTCTACATGGGCATGAGGGAAGCTCAGAACTCCCATGTATACTGGtgGCGTTACTGTATCCGGCTAGAGAACATGGGCAGTGAGGTGGTGCAGTTGAGGGAGCGGCACTGGAGGATCTTCAGCCTGTCGGGGACTCTGGAGACCGTCCGGGGGCGAGGGGTCGTGGGGCGGGAACCAGTGCGCCCAGCGGGCACATGTGAGCCCAGGACTCCGCACCGCAACGAACGCTCGAGGTTCGTCAGAGTCGTCGCGACGAGCGCAGAAGGCCATCACGCCTGGCCACGTCTGTGTGCGAGTCGCGCTCTGAGCGCCAGCGCTCTGAGAGGCGGCGGCGCGTGTTCATTGGACCGCGAGGCCTCAGGCGGAGCGGGCGGCGCTCGGTTTACCTGCCGTGTTGTTACAGcgtgggcggggcagggcagggcaagGGCGGCTGTGTCCCGGGCGCTAGGGGCTCTGACGCTCCCTAGGCTGTAG

Transcript

AAFF_T00376440

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan
PF00307	CH	Calponin homology (CH) domain	Domain	Interproscan
PF04379	DUF525	ApaG domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR001715	Domain	Calponin homology domain	Interproscan
IPR007474	Domain	ApaG domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR011722	Domain	Hemimethylated DNA-binding domain	Interproscan
IPR036623	Homologous_superfamily	Hemimethylated DNA-binding domain superfamily	Interproscan
IPR036767	Homologous_superfamily	ApaG domain superfamily	Interproscan
IPR036872	Homologous_superfamily	CH domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14289	F-BOX ONLY PROTEIN 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0042645	Cellular Component	mitochondrial nucleoid	Interproscan
GO:0070987	Biological Process	error-free translesion synthesis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-