Gene detail

Detailed information of KAJ8400710.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8400710.1	FORKHEAD BOX PROTEIN J2 FAMILY MEMBER	AAFF_1.1_unplaced_75	3728966	3789987	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00394790

ATGACGTCGGAGCTGGAGAGCAGCTTGACCTCCATGGACTGGCTGCCGCAACTCACGATGCGGGCGGCCATCCAGAAGGCGGACGCCCAGAACGCCCACGGGCCGGCCAAGAAGAGCGCCCTGCTGGACCCCAACACCACGCTGGACCAGGAGGAGGTGCAGCAGCACAAGGACGGCAAGCCGCCCTACAGCTACGCCAGCCTCATCACCTTCGCCATCAACAGCTCTCCAAAGAAGAAGATGACCCTGAGCGAGATCTACCAGTGGATCTGTGACAACTTCCCCTACTACAGAGAGGCGGGCAGCGGCTGGAAGAATTCAATTCGACACAATCTGTCCCTGAACAAGTGTTTCCTCAAAGTGCCTCGCACCAAAGATGACCCTGGAAAGGGGTCGTACTGGGCGATCGACACAAACCCAAAGGAGGACACGATGCCCACCAGGCCCAAGAAGAGGCCGCGGTCAGGAGAACAGGCCTCCCCTCCGTATATCAGGGACACAGACTCCCGGGGAATGGACTGCATCATCCCTGGAAGTGCCTCTCCCACGCTGGCAATCAACACTGTGACAAACAAGGTAGCACTGTACACTCCAGACCAGGACGGCAGTGACAGCCCCCGAAGCAGCCTTAACAACAGCCTGTCTGACCAGAGCCTGGCTTCGGTCAACCTGAACAGCGTGGGCAGCATGCACAGCTACACTCCGGTTACCAGTCACCCAGAGCCTGTGTCCCAGTCAATGAGCCTCCAGCAGCCTCCCCAACAGACCCAGTACAGCATGCCGGAGCGAGACAAGCTCCTCTTCTCTGACTTCGAAGATCTCAGTGCCTCCTTCCGCAGCCTTTACAAGTCCGTCTTCGAGCAGTCCTTCAGCCAGCAGGCAGGTCTGATGGTCATGCCCTCAGACTCAACACAGCAGACCCACACCTCGTGTTCCTACCAGGCCCCCCTTGGCCAGAACAGCGTCGCCAACAGCCTGGCAAACAGCGGTGGCCAGGTGCCACTGTCCCACCCCTCCCAACTGCAAAGCCAGAACGCCCAATCTGCGCACGGCTCACCCCATGGGTCACACCTCTCCCAGCACCCGCAGCAGCACACCCAgcacccttcccagcatgcGCCGCACACTCAGCACCCCTCCCAGCATGGCCAACACTCACAACACCCTTCCCAACATTCAGCCCACTCTCAAcacccttcccagcatgcaccgcACTCACAAcacccttcccagcatgcatcacacacacaacacccttcccagcatgcatcacacacacagcacccttcccagcatgcatcacacacacagcacccttCCCAGCACGCACCACACTCGCAGCATCCTTCCCAGCACGCACCGCACTCTCAAcacccttcccagcatgcaccacacacacagcacccttcccagcatgcacaacacacacagcatccttcccagcatgcaccacaCTCTCAGCACCcctcccagcagcagcagcagcagcagcagcaacagcaccAGTCCCATCCTGCCCAGCAACAGCTGTCCTGTAACTCTGGCCTGCCCTCGGACTGGTACCCCAACTTGGACGTACTGAAGGAGAGCTGCCGCATTGCCAGCAGCTACAACTGGGCTGGCGTAGACCTCTCACCCTTCCAAGGTTTGAAGGAGAGTATGAGACAGGCAGAGCTCAACAACTGGTCTCTGGAGCCCACGCAGATTGCCGACCTCTGCTCCTCCATAAACCAGTTTTTCGCCCGTACTGGGGTCATCCAGCCACAGGGGGCAGTGCAGCCCACCACGTGTCATGGCTCCATGCACACTGGCAAGGCAAGCCAGCACATCAGCACAGGAAATCTCTACATGGACTCCAGGCAGAATATGCCCCCTATGATGGGCCCCCCAGTGTACCCCCACCTCTCCCCACTGAGCAGCGCGGGCCCCACCATGACAGgacaccATGCCCAGATGAACCAGCAGCACATGATTCCTCCCGGAAGTTTCCAGATGCGCCGCATGCCTGCCGATGACATCCAGGACGACTTTGACTGGGACTCCATCGTTTAG

Transcript

AAFF_T00394790

CCGTCGTCTCCCTCCGCGCGCCCCCCCGTCCTCCCAGTCGCCATGACGTCGGAGCTGGAGAGCAGCTTGACCTCCATGGACTGGCTGCCGCAACTCACGATGCGGGCGGCCATCCAGAAGGCGGACGCCCAGAACGCCCACGGGCCGGCCAAGAAGAGCGCCCTGCTGGACCCCAACACCACGCTGGACCAGGAGGAGGTGCAGCAGCACAAGGACGGCAAGCCGCCCTACAGCTACGCCAGCCTCATCACCTTCGCCATCAACAGCTCTCCAAAGAAGAAGATGACCCTGAGCGAGATCTACCAGTGGATCTGTGACAACTTCCCCTACTACAGAGAGGCGGGCAGCGGCTGGAAGAATTCAATTCGACACAATCTGTCCCTGAACAAGTGTTTCCTCAAAGTGCCTCGCACCAAAGATGACCCTGGAAAGGGGTCGTACTGGGCGATCGACACAAACCCAAAGGAGGACACGATGCCCACCAGGCCCAAGAAGAGGCCGCGGTCAGGAGAACAGGCCTCCCCTCCGTATATCAGGGACACAGACTCCCGGGGAATGGACTGCATCATCCCTGGAAGTGCCTCTCCCACGCTGGCAATCAACACTGTGACAAACAAGGTAGCACTGTACACTCCAGACCAGGACGGCAGTGACAGCCCCCGAAGCAGCCTTAACAACAGCCTGTCTGACCAGAGCCTGGCTTCGGTCAACCTGAACAGCGTGGGCAGCATGCACAGCTACACTCCGGTTACCAGTCACCCAGAGCCTGTGTCCCAGTCAATGAGCCTCCAGCAGCCTCCCCAACAGACCCAGTACAGCATGCCGGAGCGAGACAAGCTCCTCTTCTCTGACTTCGAAGATCTCAGTGCCTCCTTCCGCAGCCTTTACAAGTCCGTCTTCGAGCAGTCCTTCAGCCAGCAGGCAGGTCTGATGGTCATGCCCTCAGACTCAACACAGCAGACCCACACCTCGTGTTCCTACCAGGCCCCCCTTGGCCAGAACAGCGTCGCCAACAGCCTGGCAAACAGCGGTGGCCAGGTGCCACTGTCCCACCCCTCCCAACTGCAAAGCCAGAACGCCCAATCTGCGCACGGCTCACCCCATGGGTCACACCTCTCCCAGCACCCGCAGCAGCACACCCAgcacccttcccagcatgcGCCGCACACTCAGCACCCCTCCCAGCATGGCCAACACTCACAACACCCTTCCCAACATTCAGCCCACTCTCAAcacccttcccagcatgcaccgcACTCACAAcacccttcccagcatgcatcacacacacaacacccttcccagcatgcatcacacacacagcacccttcccagcatgcatcacacacacagcacccttCCCAGCACGCACCACACTCGCAGCATCCTTCCCAGCACGCACCGCACTCTCAAcacccttcccagcatgcaccacacacacagcacccttcccagcatgcacaacacacacagcatccttcccagcatgcaccacaCTCTCAGCACCcctcccagcagcagcagcagcagcagcagcaacagcaccAGTCCCATCCTGCCCAGCAACAGCTGTCCTGTAACTCTGGCCTGCCCTCGGACTGGTACCCCAACTTGGACGTACTGAAGGAGAGCTGCCGCATTGCCAGCAGCTACAACTGGGCTGGCGTAGACCTCTCACCCTTCCAAGGTTTGAAGGAGAGTATGAGACAGGCAGAGCTCAACAACTGGTCTCTGGAGCCCACGCAGATTGCCGACCTCTGCTCCTCCATAAACCAGTTTTTCGCCCGTACTGGGGTCATCCAGCCACAGGGGGCAGTGCAGCCCACCACGTGTCATGGCTCCATGCACACTGGCAAGGCAAGCCAGCACATCAGCACAGGAAATCTCTACATGGACTCCAGGCAGAATATGCCCCCTATGATGGGCCCCCCAGTGTACCCCCACCTCTCCCCACTGAGCAGCGCGGGCCCCACCATGACAGgacaccATGCCCAGATGAACCAGCAGCACATGATTCCTCCCGGAAGTTTCCAGATGCGCCGCATGCCTGCCGATGACATCCAGGACGACTTTGACTGGGACTCCATCGTTTAG

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	Fork_head

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00250	Forkhead	Forkhead domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001766	Domain	Fork head domain	Interproscan
IPR018122	Conserved_site	Fork head domain conserved site1	Interproscan
IPR030456	Conserved_site	Fork head domain conserved site 2	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR045912	Family	Forkhead box protein J2/3-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46078	FORKHEAD BOX PROTEIN J2 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-