| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| KAJ8398479.1 | THROMBOSPONDIN | AAFF_1.1_unplaced_90 | 2928999 | 2963359 | - |
| CDS | |||||
| AAFF_T00427340 | |||||
| Transcript |
| AAFF_T00427340 |
| Protein |
| KAJ8398479.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02412 | TSP_3 | Thrombospondin type 3 repeat | Domain | Interproscan |
| PF05735 | TSP_C | Thrombospondin C-terminal region | Family | Interproscan |
| PF07645 | EGF_CA | Calcium-binding EGF domain | Domain | Interproscan |
| PF11598 | COMP | Cartilage oligomeric matrix protein | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR003367 | Repeat | Thrombospondin, type 3-like repeat | Interproscan |
| IPR008859 | Domain | Thrombospondin, C-terminal | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR017897 | Repeat | Thrombospondin, type 3 repeat | Interproscan |
| IPR018097 | Conserved_site | EGF-like calcium-binding, conserved site | Interproscan |
| IPR024665 | Domain | Thrombospondin/cartilage oligomeric matrix protein, coiled-coil domain | Interproscan |
| IPR028507 | Domain | Thrombospondin-3, coiled-coil domain | Interproscan |
| IPR028974 | Homologous_superfamily | TSP type-3 repeat | Interproscan |
| IPR046970 | Homologous_superfamily | Thrombospondin/cartilage oligomeric matrix protein, coiled-coil domain superfamily | Interproscan |
| IPR048287 | Domain | Thrombospondin-like, N-terminal domain | Interproscan |
| IPR049883 | Domain | NOTCH1 EGF-like calcium-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10199 | THROMBOSPONDIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005576 | Cellular Component | extracellular region | Interproscan |
| GO:0007155 | Biological Process | cell adhesion | Interproscan |
| GO:0008201 | Molecular Function | heparin binding | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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