Gene detail

Detailed information of KAJ8397664.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8397664.1	TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 21	AAFF_1.1_unplaced_96	2707750	2740175	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00436630

AGTCCGCTCAGGGTTTGCTGCAGAGACACTGAAGAAACCTGGACAAACAAGAGACACAATTTCGATCTTTATTACAGCGTCGCTATGGGATTTATACCTTTCTTCCAAAACGAAGCTCTCATCCCATACTATCTGAAACCCGTTCATTTCGTGACACTGACTTTAAAAAACTGCCGGTGGAAGAAATGCCAGTTTTAGATTAGGTTAGTAATAGGCAAGTAATTGTGATGTGGGTGTTCTCCTGATGCAGGGAGATGTACCACCTATCAAATGAGAAGCATTATTAGCTCAGTTATAGAAATGGGACGATTTTGAGCTACTTTAATATTGGAACATGCTTGGGAAAATGTCATTGATCTATGTACCTCTGACGcTGCTGCTTGCACTCATCGGTGACGTCCCTGCCCAGGCTGCCGCCCTCAGTGTTGCCACGGAGTCGCTCTCCCTCCACAAGTACAACCACACTGACCCCAGCACCAGCAGGCAGCTCAAGTGTGACAAGTGCCCTGCGGGAACCTATGTGTCCAAGCACTGCACCCAGACCGCTGTGCGAGAATGCAGCCGCTGCCCCGAAGGCACGTTCACACGCCGCGAGAACGGAATCGAGCAGTGCCACCGCTGCCGGGCACCCTGTGCCACACCCTTTGTGGAGAGGGACCCATGCATGGCCACGTCCGACCGCGAGTGCACCTGCCCCCCGGGCACTTTCGCCGGCAGGGACACCTGCAGGCCCTACTCCCAGTGTCCCATAGGCCAGGGCGTGAGGAGGTCAGGCGGGGAATCGGAAGACGTGAAGTGCAGGCAGTGCCCGCGAGGCACCTTCTCAAACGTGTCCTCCAGCGTGGCCAAGTGCAGGCCCCACACTAACTGTTCCGCCCTGGGTCAGGTCCTCAGGGCTCCAGGCACAAAGGACTCGGACAGCACCTGtggccccccacccaccaccagGCCGTCCCCAACCCCTTCCGCATTCGACGAGGCTTCCTCAGGTGTCATGATGCACAAAGGGTTGGACACCTTGACAGGTGTTCAGGAATTAGTGCTCTCGCTGAGCAGCAAAGGAACTGTTCCAAGCAATAGGGACACCAGCATAGTGGGCCCGATCTCCGATGAGTCCAACAGGTCCGCCACGGAGCCCGGAGCCACCACCCCCACGCGGAAGCACCACAAGCGCCCGCACGACCACCAAGGCCAGCAGCAGCCGGCCGCCAAGCAGGCCATGGATGCCCTGGCAGAGGGAAAGCCACAGGGCGCCGGGTACAGGCCCACCCGCCGGGGCGCACCTCGGCCCAGCACGCACAAGCACTTTGACATCAACGAGCACCTGCCCTGGATGATTGTGCTGCTCCTACTCCTCGTGCTGGTGGTAATAGTGGTGTGCAGCGTGAAGAGGAGTTCACGGGTGCTGAAAAAAGGGCCCCACCAGGACCCCAGCAGCATCATGGAGAAGGCCATCCAGAAGAAGCCCGCCGCACCCATGCAGGTCAAAGAGAAGTGGATCTACTACTCCAATGGCCAGGGTGTGGATATCCTGAAGCTGGTCTCTGCCCAGATTGGCAGCCAGTGGATTGACATGTACCAGTACCTGGCCAATGCAACTGAGCGAGAGGTGGCGGCCTTCTCCAACGGGTACACGGCGGACCACGAACGGGCGTACGCCACGCTACAGCACTGGACCATCCGCGACAGTGACGCCAACCTCGCCAAACTCATCAGCGCCCTGCACCGGCAGCGTCGCGTGGACGTGGTGGAGAAGATCCGCTGCGTGATGGAAGACAATCCCCAGTTCGATCTGAACCAGCTGATGACCTCTGTGAATGTAACCCAATGCCTCAGCCCCAGCCATAAGCCTTTAGACTGCCCGGGCATAGTGGTGGAGCAGTCTCCCGTGGACAGGACCAAGGGATTCTTCGCCGATGAATCGGAGCCGCTGCTGCGCTGCGACTCCACCTCCAGCAAAGACTCCGCCCTCAGCAGAACCGGCTCTTTCATTACCAAAGAAAAGAAGGACACAGTTCTCCGTCAGGTCCGGCTGGACCCATGTGACTTGCAGCCCATCTTCGATGACATGCTACACATCCTGAACCCTGAGGAGCTGCACGTCATCGAGGAGATCCCCATGGCTGAAGACAAGCTGGACAGGCTATTTGAAATCGCCGGTGTCAAGAGCCAGGAAGCCAGCCAGACGCTCTTGGATTCTGTATACAGTCACCTGCCAGACCTGCTGTAGCCCACGCAGCCCTGGGCGGCCGACTTTCATTCCCTTCCCACATGCTGGCCAGGCAGTGAGGGAGAGGCAGGGGAGCAAAGCTCTGCAAAGTGCCAGGAGCCTCCCACAGCTGCCTCACCACTGTGCAcattaaaattctgcttgcaaCTGCATCAATGTAGCATTGAAAAAGTGTTTCTCTTACATTTTGGAGCTTCTTCTTGGTGTGTTCTCAATCAGAcatgtcagtgttcatgttgtaaacacatgcacatatacacacacccacacacatatatatatatacatatacacacggaaacacacacacacacacgcatatactgtatatatatatatatatatatatatacagtatatatatacacacatatacacacgcacaatgtCTAACACTAATGATATGTAATATAATTTATGCactaattttatatttaaaaaaacaaaaacatcttaaCCTTAACTGGCATTCAGCCAAATGTGCTTCAATTGCCTATGTTTAAAGCGCTGTTTACTAACATGTCaagttattattctttttttttttcagatcagTTATCGTTGTTATGATTATTTCTGTAGATTTCTATGTTTTTCAGCAGCTATGTTTAACATAATTTCATGGGCATTTAAAATTATCCCTGCTAAGTACAATAAAATGATCTCACATAAACTGAGGTTCATATTCTGAGATATCTACTTGAATTTGACTGTCACACTTTGGGATTGTGgtacttcatttaaaaaaagaaaatgcagcaTATAATGGCTTATTCCTAAAAATGCAccaaaaaagaagaataaaaacaaagagaatTTTTTGCTGTACACAGACTGGTGTCATGTTTCAGACACTGATGTTGAGaactcaaaatgtgtttttgccaAGCCAGTCCTTATCAAGCTACTTTGGTGCTAGACTTGAAAAACCCTGGTTGTGCTGGTTTCCCAATAAGGTGACTTGGGGTAGTTTGATTGTGCTTTCTGACCTTACTTTATGGGATGAATGAACAGCGCCTGATATTGCATTCGCTGGATTTAATTTAAGAGTGATATTAATGTTGTACGCTTGTCCAGTTGGGACTTAATGTAAGAGTGAACATGAAGTGTTCGACGAAGTTGAAACATGAAGCTGATGATGTCTGAATATTATATTCTGGTGGCTGTTTTAATACTTAACACTTGTAACCAATACGTTTATTATTGTAACATGTTAAATCAACCGAATAAAGTTCAATCTTTTATCATAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00020	TNFR_c6	TNFR/NGFR cysteine-rich region	Domain	Interproscan
PF00531	Death	Death domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000488	Domain	Death domain	Interproscan
IPR001368	Domain	TNFR/NGFR cysteine-rich region	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR022330	Family	Tumour necrosis factor receptor 21	Interproscan
IPR034034	Domain	Tumor necrosis factor receptor 21, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46921	TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 21	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0002250	Biological Process	adaptive immune response	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0006959	Biological Process	humoral immune response	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0030889	Biological Process	negative regulation of B cell proliferation	Interproscan
GO:0031642	Biological Process	negative regulation of myelination	Interproscan
GO:0042130	Biological Process	negative regulation of T cell proliferation	Interproscan
GO:0051402	Biological Process	neuron apoptotic process	Interproscan
GO:0097252	Biological Process	oligodendrocyte apoptotic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-