Gene detail

Detailed information of KAJ8397316.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8397316.1	SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3	AAFF_1.1_unplaced_99	3200473	3224963	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00441500

ATGCCCTCTACGCAACGACTCTCACGCGCTCTCTTCGCGCcgctggtgctgctgctggcggTGCCATGGTCACGGGTGTCAGGCGCGCCGTGTTCCGGAGTCGGCGGGGAAATGGCAGAGATCTCGGGAGACGAACTTCCCAAAGAGACCCCTCCAAAGAGCTCTCCACTCACCAAATGGGAGCCGCTGGCCAGGCTGCTCATATGCGAGGTCGGCAACCTCCGCGACCAACAGTTTAAGGAGTTTGGAGACCCCAAGGCGAACTTTAAGGACAACAAACTCGAGCTGCCCAGCATTCCAGAGCCTGACTGCTCTCCGCCAAACTTCAGCAAAGAGAGCTGCCTGCAGGGAGTCTCCAGCGGGCTGCAGGTGCACGGAGCGTACCTGCACTTCGTGGAACGGGAATACCCGAGCCTCGGCAAAGTCTCCGACATCAAGTTCCGGACGAAGCGTCTGGCCGATCACGTCATGGAACTGATGAAGCACTCAAAGCGCACGCACGAGCTGGACTCCCAGGCACGCGAGAAGCTCGTGAGCGCGCTGCCCCAAAGCACGCCCTGGGAGCGGAAGATGACGGTGCACGTGCTCCTGCGGGAGTTCCGCACCTTCCTGGAGGACGCggacgcagttctaaacccgtctctaccagaccggccctggtcatcagccccaatcgggggcggcgtttggctgtctgccccagggggagggaggagggtgagccggctcgggtccgccatgaagcacCGCTGGTGGTGTGCATGCGGGTTTGACCACAGTTTGACCGCAGTGCTGGAGGTGTGCATGCGGGTTCGACCACAGTTTGACCGCAGTGCTGGAGCGTTAACGATGCAGCTGAAAGTTCTCCACCTGCCCCCACGccaatcgccgcccctggtggcgctcccggccagagccgactctggcgggacggggaatcgaaccccggtctccgtggccagtgtcgaacgttgtaaccactggaccacgcgggaggcaaaagGAGATcaaaggacaggacaggaagtgacatcgtTGGTTTGCGAAATTGCTGCCCTGCCTCGATTGGCAGAGAGGAAACTCGGCAAGTCCGTGACATCATCACAGGAAACACCACTGTCATCCACTGGGGGCGTGGCGCGGGGCGGCCTGAGGGGGCAGGAGCTGTGCGTGGCGTTTGACCTGTACCCCGTCCTGTTCAAGGCCTGCTACCTGCAGGAGCAGCCCGAGCTGCTGCGCCACCTGGTGGCCACCTGGCCCCTGTCCCGCCTGGACCTGCAGGGGCTGCTGGGACGCACGGCCGACTGCCCGGAGGACCTGACGTCGCGCACCTGCCGGCGCTGCCTGGAGGCGCTGCTGACGGGCCTGCGCGACTACAGCTGCCCCTGCGGGGTCACGCTGGGCCGCTGGGGCCGCACGGAGCTGCTCACGCGCATGTGCGGGGACGCCCTGCTCGCCACGCAGGGGCGCGAGGTCCCGCCGGCCGACCCCGACGCCGACCCCGACGCCGACCCCTTCCCCACGCCCGACCCCTGCGTGGACGTGCGGCTCAACGCCTTCGTGACGGGCCGCAACGTGGAGGCGGTGACGCAGGTGCTGCTGCTCCGGCGCGTCGCCCCGCTGCGGCTGTGCTGCGCGGGTTTCCGCGGCGACTCGCTGGCGCTGCGGCAGCTGTTCCGCGCGCTGAAGCTGGCGCACACCGCCGGGCTGGAGCGCCTGGAGCTGGTGCACAACGTGGCGCTGGAGGCGCCGCACCTGGAGCTGCTGCTGGCCGAGCTGGAGTTCCCGCGCCTGCGGTCGCTCACGCTGCCCACGCGCGCGCTGGACGTGCGACGCCTGCCGCCGCACAACGCCGGCCTGCTGCGCTCCATCGGCGAGCGACTCAGCCATCTCACCGAGCTCACGCAGCTGTACCTGGGCTTCTCCACGCTCACCGGGCACCTGCGCCAAATCCTCAGCCCCCTGCTGACGCCGCTGCAGGTGCTGGAGTTGGCGAACTGCGACCTGAGCGCGGTGGACATGGCCTACCTGGCCAACAGCCTGCACTCGGAGTACCTGCAGAGTCTGGACCTGAGCGGGCACCACCTGGCCGACCTGTTCCCGCTCACCTTCCAGAAGCTGCTGCGCCGCTGCGCGGAGACGCTGCAGAGCCTGTGCCTGGAGGAGTGCGCGCTGGGCGAGCCGCAGCCCGACTTCCTGCTGGGGGCGCTGTCCCCCTGCCGCGCCCTGCGCGAGCTGAAGATCCTGGGCAACCCGCTGGGCGTGGCCGAGCTGCGCCGGCTGTTCTCCGCGCTGGCCGCCCTCCCCCACCTGCGCTACGTCGAGATGCCCGTGCCGCGCGACTGCTACCCGCCCGACGCCTCGTACCCGCTGGACGAGGCGGCGCTGGGCCGCTACGACCGCGACGGGTTCGAGCGCGCGCGCGCGGAGCTGCTGGCCATCCTGCAGGGGGCGGGGCGCGGGGACGTGGAGGTGTGCACGCCGCTGTTCGGCGCCTTCGACCCCGACATCCACGAGACGAGCAACGAGCTGGGCGTGGCCATGCTGCACTCCTTCAGAGACGCGCTGGGCAGCTACATGGACACGGTAGGGCTCCAGATATTTCACATCCTGCAGGGCAGAGACGACAGCACGCTGGATCTcacgAACTGCGGGGTGCGACAGTATCATGagaGGTGGAGGCCAGCTCCGAGCAGAAGGCGGCGTCGGGCAGAGCCACCAGCCGCTCCAGGGGGACgcaggctcacctggggCAGGCTCACCTGGGGCAGGCTCACCTGGGGCAGGCTCACCTGGGGCAGGCTCACCTGGGGACTGAGGCCCAGGTGA

Transcript

AAFF_T00441500

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00489	IL6	Interleukin-6/G-CSF/MGF family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003574	Family	Interleukin-6-like	Interproscan
IPR009079	Homologous_superfamily	Four-helical cytokine-like, core	Interproscan
IPR030474	Family	Interleukin-6/GCSF/MGF	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR050694	Family	PRAME domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14224	SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005125	Molecular Function	cytokine activity	Interproscan
GO:0005138	Molecular Function	interleukin-6 receptor binding	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006955	Biological Process	immune response	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-