Gene detail

Detailed information of KAJ8397284.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8397284.1	UNCHARACTERIZED	AAFF_1.1_unplaced_99	2659433	2674622	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00441180

ATGATCGGGCCGAAAGGTCTGACCAACAGGGCTGAATTATCTTCCCCCCCCAACGAAGAAATGGAAGAAATGAACCGCATCCACTATGAGCTTGAGTACACAGAAGGCATCAGCCAGCGCATGCGCATCCCTGACAAACTCCAGATGGGCCCCTCTGCCTCTGACACGCTGGAGGCCCATCACAGTGCCATGATGCAGGTGCCAGAGCGCATCCTGGTGGCAGGGGACAACGACGACTCCCTGTACTCCAGACCCAGGGACCTAGACCTCATCCAGGCCACGCCCCTGGAGTCTCTGGCGCTGAAGACCCCCCCGCGGGTCCTCACCCTCACCGACCGGCCGCTGGACTTCCTGGAGATGGAGCGCTCCACAGGACTGGCCCATACCGCCGAAGAGGGGCGTGCTCAGGTGCGAACGCGACGGGAACGATCTGCGAGTGATCACACCCCGGCCCGTCCGAATGGGCAGCTGAGCAGAAACGACCTAATTGTAACCCCACCCACGCGGGCCCCTCTCTACACCGCACCTGAGGACGGACGACACCTTGGTAGCACACGCGGTGTCCTGTCCGTGATCCAGTCCACCACTCACCGTGCCTACCAGCAGGTTCTGGAGGTGCTGGATGAGAACCACCACAGCAAGCCTGTGCTGCGAGGGGGGTCCTtcaaccctccccacacctccagACTTGGTCTCTCGACTCTGGACACTACTCAGGAAGGGGCCTCTGATGAAATGGCTGTTGTAGATTCGACATCACTACGACGACAGATGCTCAAGCTGAACCGGCGGCTGCagctgctggaggaggagaacaaggagctgctggaggaggagaacaaGGAGGCGGGAGATCATCATGTACTCCATCACTGTGGCCTTCTGGCTCTTCAACAGCTGGGTCTGGTTCCGCCGCTAGGGCCGGACCCAGGGAACCATCTTGCCTCTGCCAAAACTGTTGCTCTCCGCCCCTCCACTAGAGCGCACTGTTGCACTACGTACCAGAAGAACGTTCTCCTTACCCAGACCAGAGAGAAGAAGCGATGGATGAAGGCATATACTCTTTTGATGGAAAGAAAACGCAAGCTGGAGGGACCACCTCCACCAAAACCTCGCTCTCATCAGCCAAACTGGGACTATCATGCAGAAGTGCAGGCTTTCAGCAGCAGACTAAAGGAAGACTTCTCCCCGGAGCTCTTGAAGACGGCCTTTGTGAACCCCTGCTACGtgcgcaccgaggaggagaagCGGCGCACGCTGGGCCTGGACGGCGAAGCCGCTGCCCTCAGCCTGAGGGACAACGTAGCGCTGCGAGGGCAGGGCCTCGACTTCGCCCACAGCTTTCTCTCCGACTGGTTCAGGGTGAACTTCCCAAACCTGCCAGTGGAGGGCGTCACTGGGCTGGTGGGTTACCTGACTTCTCCTGCGGTCATGTGCCACGTGGCGCGGAACCTGGCGGTGGACGAACTGGCGCTGAGCGGTCAGTTCCCCGTGCCGGACGATACTCTGCACGCCACATTCTTCGCTGTGATTGGAGCCCTCCTTGAGAGCAGTGGGGCAGAGAGGGCTGGATTCTTCCTGCGGGACTTCCTGGTCACACAGCTGCTGGGGAAGGATTTGTTTGAGGTGTGGCCAGTGGTGAACCCCATGGGCCTGCTGGTAGAGGAACTGTCCCAGAGAAAGCAGCCGCTTCCTGAGCCTCGCCTGACCAGATCGGCCGGCGCCAGCACTGTGCTCCCCCTCTACTTTGTGGGACTCTACAGCGATAAGAAGCTTCTGGCTGAAGGTCCAGGGGAGACGGTCCTGGCTGCAGAGGAGGAAGCAGCCCGCGTGGCCCTGAGGAAACTGTATGGATACACGGAGAACCGGCGGCCCTGGGACTTCTTCCCTCAGAGCCAGCGCCCCGCCCCTGCTGTTCATGCCCTCCAAAGCACATAAGGGAATCATTGGACAATCATGTGACCCAGCCCTGTCACTGCAGACAATGTCCAACAGGACCATCCACCAACACCCAGAACGGATGCTCAGTGTGAACTCGAAAGGTTACTATGGAGTGCATCAGCtgatataccacacacacacacacacacacactctccctcatgCTACACAAGAATTAAGCAACTTAATCATCTTTTGTTTATATGAGTGCAAAGTGTTCATGAATTATAAAACGATTTCTGAATACTATAATAAAACCATTTCTGAAGCGCAAAGCTGGAATTTGTTATGCTTCCTTTTAGTGGTACAGCtttgtttggagaaaaatgctaaaacaaaacaatattggGATTATAGAGTACAAATAAAGTAGTAAAAACACGATTTAAATGCATTACTAATAAGGGAAATAATGCAGAATATTTGGAACAGGAGGTTTTTATTTCCAGTATTTGACAGGTTTCTGTGAGAGTGATGAGTGCGAGAGACACTTATGATGACATCATGTGATGACTTAAGAAGCCAAACTCGTATGAAGGGTCTGATGTTGCAAACCGATTAATCGAGATAAATACTACCAACCCTTTTCTTGTTTGTACGCATTGTTTTTGCTTTCTACCTTGAAAAATTGTCCACCATACTTTGTTCTTAGTTGTCAGCTGGCTGTAGATAGCAAGTCCCTTGCCTAGATGGCGTCAACGGTGATGTTTGACTTTCTGTGCTGCCGTATATGATGACGTCACCGGTGTCCGCTTATTCTCTCCTTGATGAGGTGGGTCTTGGCTTAAAGACACAATGTGCAGTAATCCTCCGCAACCACAGGAGGCAGTGTATCTGGACAATGATGGGAGCGAGTGCTTCATCACTGCTCCCTCCTCTTGGAGGTTCCGCAGACACAGCCACCGATCCCTGCCAGCACTTGGAGCAAGCTGAACAGCACCTCCAACAGGCTCACAGCCGCCAACCCTGTGAATGTCACCACGTGCAGGTTCACCAGCTCATCCTTGTCCAGTTCAAGGCCCGCACTCAGGATCCGGTTCCCCTCTGTGCCGTCTTCGGTTCTGTTCCAACAGCCATCCTCGTTGAGGTACCAGCTGATGTCAAAGTTCAGCTCAGAGAGAGACCTGGCACAGACTGAAACTGTGAGACTCCTGCTCATCTGTTGCACAGAAATAACCTTGGATTGTCTtcagtatgtttaaaaaaaaaaaatgttttccccctatttttttcttcttctcctaaACATATTTGTTCTCTGTTTAAGAGAGTTCAAACTAACATGGGTCCTATAAAGTGCTAGGGTGCTGCCAGCCTTCAGTTCTGTTCACTCTGCattccagcagctgagctgcacaggcATTTTGCCTGAAGAATGCACCACATGTGCAGCCGGTGCAGGTGAACTGCAGGCACCTCATCAACCAGAGGGGATACCCTGCTGGTTGACACCaaccctccctgggtgatggtATGGACAATTGTGCATTTCAttgtgggactcctggccacagtcagcaacCACATAGTCAGGATTCAATTCTAGATCTTGGGACATGTCACTGCACCAAGGATTAGTGCttcaatatgtatttttaacaatTTGCTAAAGGTGCATCATGGATAATTGTACTTTAAAATAGTGTAATTGCTTTAAAATAAAGTCATTGATTAATTTATCGATCGTGCATGGCCAGTGACTCACCCAATGTCCT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05644	Miff	Mitochondrial and peroxisomal fission factor Mff	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008518	Family	Mff/Tango-11	Interproscan
IPR014720	Domain	Double-stranded RNA-binding domain	Interproscan
IPR036389	Homologous_superfamily	Ribonuclease III, endonuclease domain superfamily	Interproscan
IPR039433	Domain	Mff-like domain	Interproscan
IPR044444	Domain	Large ribosomal subunit protein mL44, dsRNA binding domain, metazoa	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16501	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003725	Molecular Function	double-stranded RNA binding	Interproscan
GO:0004525	Molecular Function	ribonuclease III activity	Interproscan
GO:0005777	Cellular Component	peroxisome	Interproscan
GO:0006396	Biological Process	RNA processing	Interproscan
GO:0006626	Biological Process	protein targeting to mitochondrion	Interproscan
GO:0031307	Cellular Component	obsolete integral component of mitochondrial outer membrane	Interproscan
GO:0090141	Biological Process	positive regulation of mitochondrial fission	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-