Gene detail

Detailed information of KAJ8397250.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8397250.1	INTERLEUKIN-1 RECEPTOR FAMILY MEMBER	AAFF_1.1_unplaced_99	2033495	2048244	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00440840

GTCGAAGACAGTACTAGCGTCGTCATTTACACCATTTCACTATAATCACATATCTCTACCAGATCGCATCTAATTCAGTTAACAGTTACAGTTAATTCTGTTAACAGCTACCATGCCCATTTTTAAGTGCTTGACTTTGTTAGGTATTCTTGTTTAATTTCATGAAAGTATGAAGCAACAGTTGCTAGCTGCTTTTTTCCACAGATGTTGAAACGATTTTAGAATTTCCCGTAGGCGGGGTTTACCGCGAACACTGTGCATTTCGCTTCCGATGACGTTCATAGAACATGTGAAAAGAGAACAGGCATGTGGACTTCAGTGGTTTTCTATCGAGTGTTTTTTGGATTCCTGACTGCCTTCCGTCTCCctgcctatctctctctctgacccctgCGTTTGGTCACCGAGGGAAGGACCGGCTGgaccaatgagaatAGTGGAGGTCTTCTGAAATGGAGCAACTTTCTACGGCAGCAGGTCCGGTGTGTGAGGGGTGGAAATGGCCAAGCGTGACGTTCCGCCTCCTCACCgtgctcctctctttctctgtgatcTCCGACCGAGGACGAGCCTCCGAGGCCACGCCCACACATCAGTCAGCCCAGTGCCGTGACTGGGAGACGTCGGGTGAAGGAGTGGTGCGGGTGTACCAGGGTGAGGTGGGCAGGCTGAGCTGCCCAATCTTCCACCTCCCCAGTGCGTCCAACCACAGCCTGCGTTGGTACCGGATCCCTGCGGGCCACGCCCCGCTGCAGCCCATAGACCTCAGTGTCCCGGGTCATCGGGTCAGCAGGGAGCGCGAGCGGCTCTGGTTCCAGCCGGCAGTCCCCGAGGATGCGGGCCGCTACGTCTGTATGCTGAGAAATGGGACGCGCTGCTGGCAGATGGCCGTGCAGCTTGAGGTGTACCCCAGGGCCGAGGAGAAGTGTGTGTCCGGTGCGGTGATGGAACCCCACAGAGAAACAATCGCTCTGGAAGAAGGGAAGACACTCCAGTGTCCTGACCTCCAAGAGTTTCAGCTCTCCTACAAAGTTCTGTCTGTCGCCTGGTTCCATAAGTACAGCACAAGATGCATCGCGCTTCCTGTTCCTAATCGGAGTGACCGTGAGGTGAAGGATAACAGTCTTCTCATTTACACAATGCAAATGATATACACAGGGAACTATACCTGTGTGGTCACCTATCATTCTGCTGGAAGAACACTGAACTTCACCAGGGCGATCATTGTGAAACCAAAGTTGACTGATCGGCTGAAGAAGACCCCAATCATACACAACCCAGATCAGAACCAGGTCTTCACGGTCAAATTAGGGTCCGAGGCCCGCCTGGACTGCAGAGCCCTGATGTTCGACGTGGAACTAGAGCCGCGCCTGTGGTGGGAGATAGACGGGAGAACGCTGGAGCAGCTCTCGGATGACCGCATCACATACGCTAGCAGCTACGAGGAGACCATTCTAGGGGAAAGGACCATGAAGAATGTGCTGATCATCCAGGACTTCAGCTCCAAGGACCTGGAGCGAGAGTACGCCTGCCACGCCCGCAACCACAGGGGCAACGCCACCACGAACGCTGTCCTCAGGGCTGAGGACTACATCCCCTCTGTGGAGCTGGGCTGCGGTCTGGGAGCGGCCCTGCTCTTTGTGCTGCTGCTGTTCGTGGTTTATCACGTGTACCGGCTGGAGCTCCTGCTGTTGTATCGTGCCTACTGTGGCCCTGATGAGAGTGCCACGGatggGAAGGAGTACGACGTGTACATCTCCTACGCCCGGAACAGCGAAGAAGAAAAGTTTGTCCTCCTGACACTCCGCAAGGTCCTTGAGAACGAGCTCGGATACAAAGTGTTCATCTTCGACCGAGACAGCCTGCCAGGAGGGACCATCACGGACGAGACCCTGAGCTGCGTGGGCCGCAGTCGCCGCCTGATGGTGGTGCTGAGCCCCCGCTACGTGGTGCAGGGGACCCAGGCTCTGCTGGAGCTCAAGGCCGGCCTGGACACCATGGCGCAGGCCGGGAACCTGCGGGTCATCCTGGTCCAGTACCAGCCGCTCAGCAGGGACAGCTGGGTGCGCGAGCTGCGCAGGGCCCGCGTGGCGCTGACCCTCGTCCAGTGGAAGGGGGACAAGTCGTCGGACCTGTCGTCGCGCTTCTGGAAGCGGCTGCAGGTGGAGCTGCCTGTGAGGAGGGCGAACGCGCTGGGCGCCGACGAACTGACCGCGCTGCCGCTGACCACGTACACGCACGCCGAGAGCGCGAGCtgagagacgcacacacacacacacacacacacacacacaggcagcacGCGATCCTGCACACgctggccacacacacacacacacacacacacacacacacacac

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01582	TIR	TIR domain	Family	Interproscan
PF18452	Ig_6	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000157	Domain	Toll/interleukin-1 receptor homology (TIR) domain	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR004074	Family	Interleukin-1 receptor type I/II	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR015621	Family	Interleukin-1 receptor family	Interproscan
IPR035897	Homologous_superfamily	Toll/interleukin-1 receptor homology (TIR) domain superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR041416	Domain	IL-1Ra-like, immunoglobulin domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11890	INTERLEUKIN-1 RECEPTOR FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004908	Molecular Function	interleukin-1 receptor activity	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0051092	Biological Process	positive regulation of NF-kappaB transcription factor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-