Gene detail

Detailed information of KAJ8397182.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8397182.1	PORPHOBILINOGEN DEAMINASE	AAFF_1.1_unplaced_99	212132	225983	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00440160

aaacaaaaacaaaacagtggtCGTATGCGCATGCGCGACATTCACCGGACGTGACGTTCGATAGAGGTCAAGGAAAGAACGCACCCGGCAAAATggatctctcttcctcctctcagcTCAAACTTTGACCAACATGGAACAAGCACATAATTCACGGCCTTAGACGGAAATGTCTTAATGATACAGTCGGTTTCTACGATTTTTTCGCTGGATATAAAGAGCGCGCCAGGATGTCGGATGAGGCCACTACACAGGAGGGCAATGGGACAGCCAGGAAGGTCATTCGGATCGGAACCAGGAAGAGCCAGCTGGCCCGCATCCAGACGGACAGCGTGGTCAAAAGGCTAAAGGAGCTCTACCCTAATATCCACTTGGAAATTGTCGGCATGACAACAACAGGAGATAAAATCCTGGACACAGCTTTATCAAAGattggAGAAAAGAGCCTTTTCACTAAAGAGCTGGAGAATGCACTGGAGAAGAATGAAGTGGACCTGGTAGTTCACTCCCTGAAGGACCTACCCACCACCCTGCCCCTGGGTTTCACTGTTGGAGCCGTGCTGAAGCGTGAAAATCCACACGATGCTGTGGTCCTGCAcccaaagcatgctgggaaaacACTAGACACTCTGCCAGACAAGAgTGTGATTGGCACCAGTTCTCTCCGCCGTGCCGCACAGCTGAAGAGGCGGTTCCCTCACTTGGAGTTTAAAGACATCCGAGGAAACCTCAACACTCGACTGAAGAAGCTGGACGAGAAGGACGACTTCGCCGCCATCATCCTCGCCACGGCGGGCCTCCGACGCATGGGCTGGGACCGGCGCATCAGCCAGATCCTGGGTCCTGAAGACTGTATGTATGCAGTCGGGCAGGGGGCGCTGGCGGTCGAGGTTAGGGCGCGAGACAGCGACATCCTGGAAATGGTGTCTGTCATGCACCACCCTGACACTGTGCTGCGCTGCATCGCCGAGAGGGCCTTCATGAGACACCTGGCAAGGGGCTGCAGTGTACCGGTCGCAGTACACACAGAAGTGAAGGACTTGCAGCTCTACCTGACTGTGGTCTCGGTGTGGCTGTAtgttctctgtgtgtcagaCAGCCTGGATGGCTCAGACAGCCTGAAGGAGACCATGCAGACCAGCATTGAGCCAGGCAATGagGTGGAAGAGGAGCGGGTGGATGAGGCCGTCCAGCGGGTGGGGGTCACCGCCACCAACGTGTCGAGGGTGGCCCAGGACGCCGCGGAGAAGCTGGGAGTGGACCTGGCCAAGCTGCTCATCAGCAAAGGGGCCAGGGAGATCCTGACCATCGCCAGGCAACTCAATGATGCGCGCTGACTCCTCCCCCAGGCCACGCCCACAGGGAGTGGCCCCCTCACCTGCAGACTCGGCCAAAGGTGCAGGGCGGACGACTGACCCGCCATCGTACGCCCGGGCAGGGGTAACCGTACCCCCGCACCTGTGGGTATAGTTGCCCCTACACCTACCCCATTACTACAAATTAATGCCAAAGTCAATgcaaaatatttcatttgtacAGAATATGGCCATTACTCCTTCAAGGGAACAATTTTCCAAAATTTTGCCCATGTACATTATAGGCATCCTGTTATCAATATCCTAAGTAATGCAATATTGATCACATATTTCAGCACATGCAAGAAATTTACCTGACGTGTACTGGCATCTTCCTGATGCACGCTAGAGCAACACTGGATCTTTAAATATTTCCATGAGTTGCAGTTTCATACTTTACATTTTTGCTTCAGTTTCTGTTTCTGGGTCTCTTTCCTTTCGCCGAACAAGTACTTTGAGatataaataaagtgtttttatttcactttcactCCCTGCCTTGCAGTCACTTCAGGCTGGGAGATGCACAATATCCTAGTCTCCTGCAAAGGttatttttgtaaattaggtaGGTGATGTTTGTAAATTAGCTGTAAATGACAAAGAACAATGGAAGTATAACTTGAAGCTGATGCACATCAAAGAGTGTGCGTgccatggttttttttttacaacccgTCAAATTCCCCTACCCTAATGCATGTGAACACATCAGTGTCTGTTTGCATAATGTACATTATTAAATCCAGCTGTATGTGAATATGATAATGTACAGCCACAGTAAATCAGCAGTGACTACTGTAGGTTTAATGTGGCTGGGAAGCAAGTAAATCACCATCTCTAACGCACTTCCGTAGGCTCTGAGTTGTGAATAAGGAACATGTGTACACTTATAGGCTTGTGTAACTGAGGCTCAGACCAGATTTAAACCCAGTGTCACAGGGCAGCGTGGAATGACGGCATGCTGACAAAACTAAACAATCCAAAGGTTATTCACTCAGCTGTACTAAATGTTTGATGTCCAGTGTATCTGTATAGGCATTCTTTTAAGGTTTTAGCTAAAGGATTTGAAAATTATGTTGAGTCTGCAGTGTAAACTGCAATTGTAAAGGTTAagagtacaggtaactgccaaaataaagggaatgcCAACAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01379	Porphobil_deam	Porphobilinogen deaminase, dipyromethane cofactor binding domain	Domain	Interproscan
PF03900	Porphobil_deamC	Porphobilinogen deaminase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000860	Family	Porphobilinogen deaminase	Interproscan
IPR022417	Domain	Porphobilinogen deaminase, N-terminal	Interproscan
IPR022418	Domain	Porphobilinogen deaminase, C-terminal	Interproscan
IPR036803	Homologous_superfamily	Porphobilinogen deaminase, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11557	PORPHOBILINOGEN DEAMINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004418	Molecular Function	hydroxymethylbilane synthase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006783	Biological Process	heme biosynthetic process	Interproscan
GO:0033014	Biological Process	tetrapyrrole biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-