Gene detail

Detailed information of KAJ8396809.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8396809.1	NEL HOMOLOG	AAFF_1.1_unplaced_103	2290979	2300605	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00014080

Transcript

AAFF_T00014080

ATGAAGGGAAGTGAAGTGGCACCAACAGGTAACGCGCGCGGAATAAAAGGACAGAACGATAGACAATTGCAACATGACTGTGTCTGGAACCTCGTTGTTCCTTTTTCTGTGCACCGCACTGTTTGGAAATGCTGGGAGTGTTGCAGAAATATGCAGAGGAGTGCACTGTTTCACCGCGGAGACGGCGGACTCCAGACCCTGCACTGGGACACACTGCCCAGGGCGATCTGCCAGACCGTCCCGGCATTTCACGCCAACGGCACAGGGCAACGTGGAGGCAGCGACATCGGCAGGGAAAGCGCAAGGATGAGACCCTCTGAAGTTAGTTATGGATGCACTGGGTCGGATTGCGTTACACCTCAAAGACAAGCCAGCAACGACTCCAGAGAATGCTGGGGCATCGAATGCAAACTACCACTGAGGATACGACCTAAGCCAAGACCAAGACCGTGTGTGGGGGAACGCTGTCCAGCTGGGTCTGAGGACACCAGCAGTCAGCCCACTTTGGTCCACATGCAGGACAGAGCGGCTCTGGGGGAATTTCCGGACTTTGGATATCCTGCGTCAGAACTCGGCGGCGCTCCTCTGGGCGTTCAGCTCACATGCGACATAAAGCCAGGTGAGAACGAGGTGCCCTCTGAGGACGCCCTGATCCTGCAGCTACATCTGGCCAAGGGGCAGGAGAAGTTTGTAGAGGCGCTGCGAGCCCAGCAGGCCGTGATCCGGGACCTTCAGCACAGGCTGGCGGAGCAGCAGGACACACTGATCGGCCAGCAGCGTGACATCCTGGACCAGCAGCGGAAGATGTATGAGCAGATGGACCTGGTAAAGGTGCAGTATGGCATGCTCTCCGAAACTGTCAAGCAGATGTCCTTTCAGAGCCTCCAGGGTGACATCCAGACCTATTTCGAGAGCCACCTCCAAGGCCTGCAGAACCAGGTGAGGAGCCAGCTGCAGAAGTCCTACGCTGTGCACAAGCTTGATGTGGATGCCAAGGTGATGGATGTGGGGCACCCCCTGCTGGACTGCGGACCCTGTGGCCCTGAGGAGTACTGCGACTTCCAGAGGGAAACACCCAGGTGTGAGAGGTGCACCATGTGCCCCTCCGGCTTCTTCCTAGTCTCCCAGTGCTCCCCAAGCGCTGACCGGATATGCCAGGACAGAGATGAATGTCTTGAAATACCAAACCTCTGTGGGGAGCAAGTCAAATGCCTCAACACCCCAGGTGGGTTCAGGTGCCTAGGAGTTTCGGAGAGGGACGCCTCCACCGGCGTGTGTGGACATGACTACTTCTACAACCGTGAGCTGGAGGAGTGCCAGGCATGTTCAGACTGCGATGGGGAGCCCGTGGTCTTCCCCTGCACGGCCGCCAGTGACACCGTGTGTGGTTTGCTCTCCGAGACCAGGCTGTCCCAGTCCTGGGCTGCGGCGGTTGCTCTACCCCCCGCCCGGGCCCCCACCAGCCACATCTATCCTGGGATGCGGCTGAATGTCCGGGGGAAAGAGCAGAGCGGTCTGCTCTCCAATCAGGATGGGACGCTGGTGTTCCAGCTACACGGCCTGATATGGGCCGACCACAACTTTGCCCTGAAGCACAGCTGCAGGAACTTCCTCCAGGTGTCGATGAGAATGAACAGcagtgaggaggaggggagggaccTCAGCAGTGTACGGGTGGAGCAGCCAGAGGGCAAGTTCTTCCAGAGCGTCAGTGTGAGCAGTGCAGCTGAGGTGGAGCCCAACCACaccctgtctctcttcctcaagAGCCCCAACCACCACTGCAACCAGAGCAAGGATGTGCACATCTATGACCTCCAACTGCCCTTCAGCCTGCTCTGGCTCTCCCATGACACGGGCGCTGTGGCCATGACAGCACAAACCTCGGTGTCCGTGCACTACCAGACAACCTACCGCCCCACCTTCAAGGTCATCTCTGTCTCAGACCCCTACATGGTGAGCATCTCACATGACAGCCGGGCGGTGAGGTTCACTGAGAGAGGGGTGGTGAAGTTCGTGTTCCAGCAGGCACTCTACTCCATGGGCCACACCTGCATCCGTGAAGGGTTCTCCCTCATCTCCTACCTGAACAGGAATGCCACCAACACGGAGCTGATGCAGGTCTTCAAGTCCGGGGTGAACTACAGAGATACGTCTGTCTCCCTGTCGGGTGCGGCCACTGTGGATGCGGGGGACATGCTCAGCTTCGAGATACACTCCCCCGTGCAGTGCAATGTCCGTTACTTTGGCGATGGCTCTGGCATCAGCATGCTCAGCCTGATCTGGATCCCCTCGGCTGTTAGCTCCGCCCTCTCTGCCACCATCTCCAAGACGGGCCTGCCAGCAGGTGCCGTCCGAAACAAGGCCCTCACCTTCCACCAGGTGAGCAGCAGCGTGCCACAGGTCCAGCTGGTGGCCTCCGGGCAGTTTGCCCGTAAGAACTTTGTCTTTCGTGAGAGTGGGGTGGCCAGTGTGGCCTTCAACCTGAAGCTGATCCACTCCTGCAACGTGGTGAAGCTGACCCTCCAGCGACAGGAGGGCGACCAGGCGCAGCCCACCCCTGTGGCCCAGCAGGTGGGTGGACACATGCCCGAGGGCACTGAGTGGACCAGCGTGGGGCTGCGCGCCACCTTTGAGGTCCACAACGGCACCATGGTCTTCATCACCCTGGACTGCGTGCGTGGACGCATCAACCAGATCACCCACGAGGGAGGCACCAACATCTCCATCCTCTGGGTGTCATCATGATTCAGTTATTTTCAAGGTTGTATAAAAAAGTCACAATCGTTTTGCACAAAACAGGAgtgatgatgggagagtgaggcttctgGAATCGCAAAGTGGGTGGAGTCAACACTTTTATCAGAGACTCCCtgaatttgaaccaatcattgtgttttgctatGGAGAGCCAGTGTCAGTGATTCACAGCACTAATGAGTTAACGAGGCCTCACTCTCTTGTTGCTaccaaacaacaacagcaaaccccccaaaaaaaccccaattaCAACAGCAACCGCAACAGTAGcaacaggtagtgaacaaaacaatggaaacaccaatgttaAGTAATTTAATAGGTTGTTGGACCACCATATACGTTGTTCATACATTGTGACATAGAGTCTACAAGCAGAATTGTGCAGGAATGAACCACTCacgagaaagtcaatcaactcacactcagttgatggaagtggaaaacgaTGTCTTGAGCTtgctccagaatatcccatgatgttcaattgggttcagatatggtgactgagaagaccatgacatatggataatgtcagtgtcatgctcctcaaacctgTGGGCGATTCCTCGTGTTCTgttgatgggggcattgtcatcttgaaagagcCCTCGCTGCAGGAATAAGATGGTTTAACATGGGCCGAAGATGACCACCTATACCATCTATTCACACCACGCAATTACGGAACCACCAAAACTATATActgttgtttccatttttttcactacctctacaacaacaacacaacaggtGACATTTGACTGGCAAGTTTAGCATATGTGTATGTTgatgtttttgacattttaatagtATTGCTGAAATTATCATATGTGtattctataaatatatatttttggcatATACACatgttatatttgtattttccaTGTATCTGTGTTCATGTTAATAATCTCTTGGGTGTaatgtttttacaaataatttacaaatgataaaattgaagtaatttttaattaatcacTTAATCATAAGTACTCAGTCTGGTTGAACAGCGACCAATTTTTCctgaatgttttatgttttctttatttctatTAGAATtgctatttgttttttatttctactttgtttttctatttttgatACCTGTTTTTGGAgtatatgttttcattttaaatcaaaatgcaatgtagttttttataaatgagcaaTAACACTATAGTGGATATTCatttaaacaaaatgcatttctcAATATAACTTATTAAGAAAAACCTATACTTAAATATAACCCactataaactaaaatgtttgtACAATCCACTTATCTTAAGACATAAGTATTTAATTTAGCCAAAGAATTTAGCCAAAGAAGAAAATACAGCATGGTCTCAAATaacaaatgtgaacatttgtaaATTAATCACTTTGACAAGACAATCTGATCACAAATGTTTCTCTATTCACAGAACATAATTATTTCCTGAATATATTTCAAGAATGATTGTACATGTTtgtcaatcatttatttatgataaTGAAGTTTGGTAAAGATTTTGTGACATTTGCATATGGTTTATTGATAGTATTCTTGATTTAATATGGCCTTGCTGTCTGTCTTGGTTACGTCGTATGTTTTGTCTTAGCCTTCATACAGTTCACCTTGTGTAAGTGCTGCTTTGTATACCAAATTTAATTGCTTCTAAAGAGTGTTCTCCAAAAACTGTTAAAAGTaattgtttcagaaaaccagccATGTTAGTCACTGAATATTGTTGTGCTTTATTCTCACTTCAGCAAGTCATTTTTGGACATTGTTTAACTCACGGCGATAGTGGaataactgtatatatatatatatatatatatatatatatatatatatttcaaatcaGCAAAATAAAATTCCCATATATTTTCCAAGATGTAGG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00020	TNFR_c6	TNFR/NGFR cysteine-rich region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001368	Domain	TNFR/NGFR cysteine-rich region	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR051586	Family	Protein kinase C-binding NELL	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24042	NEL HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0008201	Molecular Function	heparin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-