Gene detail

Detailed information of KAJ8396299.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8396299.1	60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL	AAFF_1.1_unplaced_107	389549	399780	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00018760

ATGCAGAACATAcgTTTCAACATTCTGTGTGACTGCCGAACAGAGCAGACTTCTGTCATCTCCGCTGAATTAACACACGTTAACACAATGCTGCGTTTATCTAGTGTGATGAGACAGATGCGGCCCGTGTGCAGGGCGCTGGCCCCTCACCTCACTCGCACCTATGCCAAGGAGGTCAAGTTTGGAGCCGATGCCCGCGCCCTCATGCTGCAGGGGGTGGACTTGCTGGCCGATGCCGTCGCTGTCACCATGGGACCCAAGGGTCGCACGGTAATCATTGAGCAGAGCTGGGGCAGTCCCAAGGTGACCAAAGACGGCGTGACGGTGGCCAAGAGCATCGACCTAAAGGACAAGTACAAGAACATCGGGGCCAGGCTGGTGCAGGACGTGGCCAACAACACCAACGAGGAAGCCGGGGACGGCACCACCGCCGCTACCGTGCTGGCACGTGCCATCGCCAAGGAGGGCTTCGACTCCATCAGCAAAGGCGCTAACCCTGTGGAGATCCGTCGCGGCGTCATGTTGGCGGTGGATACAGTCATCAACGAGCTCAAGAATCTGTCCAGGCCTGTCACCACACCGGAGGAGATTGCACAGGTGGCCACCATCTCTGCTAACGGAGACGCAGAGATTGGCGAAATCATCTCCAATGCCATGAAGAAAGTGGGACGAAAGGGGGTGATCACCGTGAAGGATGGTAAAACTCTGCACGATGAGCTGGAGATCATTGAGGGACTGAAGTTCGACCGGGGCTACATCTCCCCCTACTTCATCAACACTACCAAAGGTCAGAAGTGTGAGTTCCAGGACGCATACCTCCTCTTGAGCGAGAAGAAGATCTCCAGTGTTCAGAGCATCGTCCCCGCCCTGGAGCTGGCCAACCAGCAGCGCAAGCCCCTGGTCATCGTGGCAGAAGATGTGGACGGAGAGGCCCTCACCACTCTGGTCCTCAATAGACTGAAGGTGGGGCTGCAAGTTGTGGCAGTGAAGGCTCCAGGATTTGGAGACAACCGGAAGAACCAGCTGCAGGACATGGCCATTGCCACCGGGGGCACTGTGTTTGGCGATGAGGCGGTGGGTCTGGCCCTGGAAGACATCCAGTTGCATGACTTTGGGAAGGTGGGCGAGGTGCTGGTGACCAAGGACGACACCATGCTCCTGAAGGGTCGGGGTGACGCCGGGGCCGTGGAGAAGCGCGTGGCGGAGATCACCGAGCAGCTGGAGACCACCACCAGCGACTACGAGAAGGAGAAGCTGAACGAGCGGATCGCCAAGCTGTCTGACGGAGTCGCTGTTCTAAAGGTCGGGGGAACGAGCGACGTGGAGGTGAACGAGAAGAAGGACCGCGTGACGGACGCCCTGAATGCCACGCGGGCGGCCGTGGAGGAGGGCATTGTGCCGGGGGGCGGCTGTGCCCTCCTGCGTTGCATCCCTGCCCTGGATACCATCACTCCTGCCAACGCAGACCAGAAGACTGGTATCAACATCATCCGATCTGCCCTGCGCATTCCGGCCATGACCATTGCGAAGAACGCAGGGGTGGAGGGCTCGCTGGTGGTGGAGAAGATCCTGCAGGGCGGCGCCAAGTTGGGCTACGACGCCATGCTGGGCGAGTACGTCGACATGGTGGAGAAGGGGATCATCGACCCCACTAAGGTCGTGAGGACAGCGCTGCTCGACGCAGCGGGTGTTGCTTCCCTGCTCTCAACCGCTGAGGCCGTTGTCACGGAGATACCCAAGGACGAGAAAGAAGGTGGAATGCCAGGAGGCATGGGTGGTATGGGAGGTATGGGTGGCATGGGCGGGGGCATGTTTTAAACCCGCCCCTCTCTGAAACCCTCTACCAGACTCAATGTGGGGGGCAGGGTGTAGGGGCCAGAATGCTCCCTCCccttccacctccacctgcTGGACGCCGATACCAAGTTTGTAGAGGAATTGCAACACAAGCAACCCCACCTCCAGCCTGGTCGTACCCTTTCTATGAAACGCCTGAAGACTGGGACTAGGCCCAGCTGTGACCCACTTCCTAAATTCACCCCCCGCCAATCCATTGTCTCACGTTCACACATTGTACGAAGACAGTGCTCAAATTTACTTGGGCTCTGGTTATACTGTTTACTGCTCACTGCTCATAAGTGCCGTTTACCCtttaaatattgaaaatgtacaaGTGCTGTTAATAttactttgttttttattgattgaaaTTGAATCAGGTGAATTTTGGAAGTGTATTACCATCTTTCAAGTCAGAACCGTAAACTCCTGTATATTCCCTCTTGGTACATCATGACCTATTTATGATATGGGGGTCGAACTACCAGACACAGCTGGCCTAGAAGGGCAGAAGGATTGACAGAAAAGATCAGTGGAGAGTTCTTTGTAGCCAATCTTCATTCCATGTCCTGGTCACCTCTGTTCGAAACACTGATGATTAATCCTATTGATCATGGTTTTTTTATACATgcatattgtatttgtattgtcctTTGTTGTCCCAACTTGTTTTGTTTAGTAATTATCATTCTGGCTGAGAAACCATTAAATACCTTCAATTGCTGTCTGCTGGCCTGGTCGTGATTGTGCATTCATAGAGCCGAAAATGTGGGACTTGTCAACGGTCTTGTCAGAAATATCTAATTTAGTTGGGGGTTCTCAGGTGCTAAAAGCATTGTCGGCTCATTTTACCTGGCTAATTGAGGGACTAAACCTGAAACGTGCCCAGAGGGGACAGTGCCTCATTCACTGGTGTtaattgtcatgttttttttcctgctttgCAAAGCCATTGGAAGGAGACTGTTGAGCAAGGACACACATGACAGGTGAAGGTCAATTTTAATCCAGAAGCGCACAGCTGGATGGACTAAGTTCTCATTGTAGCATTCTGTCCTTTTGCTGATGAAAATCACATCAGTAAAAGGACAGGGAACAGTGGTGTTCTTGGTATCGTCTTGTGTTCATCGTTCCACAGACAGAATACATCTGCATACCATTTACTTAAGTTCTGATCTCAAAGGGGGGTGGGCTTTACTAGGGGCCAGATAACTAGGGGAATGTGTTCAGCTGACAGAATAGCAAATGGGTTTGTCCCCACTCATTGACTTTATTATTGCTGGCTGACTATAAGGTCATCAAGATcttgtacagagccaaaatagGTGATAACTCTTAAAATATACTATTTGtaatctgttctgttctgtataAAATGCAGCCTGTACTGAAATTAAGAAGAATGCAACAGTTTACCTACTGAACACGTTTCCCTGGTGACAGCTGAATCTGGGTCTTGGTGAGGTATGGGAGTATCAGTGGGGTTTGTGAGCTTGAGTGACGAGACTCCCATTGCAGTGTGATTTGAATCATGTCTTTCAGCACTAGCTCTGTGAAAGCCATCGCTTTCCGGTGCTAAATATATTGTACCTGATCTTAATTGCATTCATAACAGTAACGAAAATGACAGCTTGGGTGTTTGTGTATAATTGTACGCTTTTGTCTGACCAGTGGCACAAACGACCGCGCAAAGGGAGAGCCCTCAAACTCAACACGACTTCAGtggtgctgtttgtttgttcgaTGCATTTTTCCTTTGCAAAGAAGCAGCCGCAATGACTCAACTGAAACTTTGTTTTGTACAATGTAGTCATTGATAATTGctgtaatattttttatttaataaaaatcatGTTCTGAATGTGTATCGTGTTTTGTGACCTTGAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00118	Cpn60_TCP1	TCP-1/cpn60 chaperonin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001844	Family	Chaperonin Cpn60/GroEL	Interproscan
IPR002423	Family	Chaperonin Cpn60/GroEL/TCP-1 family	Interproscan
IPR018370	Conserved_site	Chaperonin Cpn60, conserved site	Interproscan
IPR027409	Homologous_superfamily	GroEL-like apical domain superfamily	Interproscan
IPR027410	Homologous_superfamily	TCP-1-like chaperonin intermediate domain superfamily	Interproscan
IPR027413	Homologous_superfamily	GroEL-like equatorial domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45633	60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005743	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0005759	Cellular Component	mitochondrial matrix	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0008637	Biological Process	apoptotic mitochondrial changes	Interproscan
GO:0032727	Biological Process	positive regulation of interferon-alpha production	Interproscan
GO:0032729	Biological Process	positive regulation of type II interferon production	Interproscan
GO:0032755	Biological Process	positive regulation of interleukin-6 production	Interproscan
GO:0034514	Biological Process	mitochondrial unfolded protein response	Interproscan
GO:0042026	Biological Process	protein refolding	Interproscan
GO:0042110	Biological Process	T cell activation	Interproscan
GO:0045041	Biological Process	protein import into mitochondrial intermembrane space	Interproscan
GO:0050870	Biological Process	positive regulation of T cell activation	Interproscan
GO:0051087	Molecular Function	protein-folding chaperone binding	Interproscan
GO:0140662	Molecular Function	ATP-dependent protein folding chaperone	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-