Gene detail

Detailed information of KAJ8393875.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8393875.1	DED DOMAIN-CONTAINING PROTEIN	AAFF_1.1_unplaced_132	2370014	2380677	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00056040

tataaaatattcattcacaaatCCTGTCGTCCATGATAGGCGACATAAGTACAAGTATAAAGGTCCTGCAATTACAATCAAAACCCTGGCATAGTTCGAGTTCCCTCGTGTAAACAAGTACATGGGATTAGCCtcttgttgaaagtgtggatgGCTCTTAAAAGAGCCTTTGGTTTAGGTTCGTAAGATTTACTTTGAGCTGGTGTACTTGGTGACGGTGCTGTCATTGACTACTGTCTAATAAAGACTAGAGACTAGTGGTGAAAATGGTTATGTGTCGCCGCTGCAGTTTCAACAAATGGCAGTTAACCAAATGAGAGATTACCCCAAGTAACAAATCTGACacggagGTGATGGAGTTCCAGCAAACGCTTCTGAAGGTCGAGCAGGCTCTGAACAGCGAGGATGTGCAGGCGTTGGTGTTTCTGTGCACGGACCTTCTGGACAAAGACGTGAGCTGCATCTGTACTGCCCGCGATCTCTTTACTCATCTGCAGCACCTTGATCATCTGACATCGCAGCGACCATTCCTCCTCGTGGAGCTGCTGCAGCTGTCCAGGCGGAGTGGGTTGCTCCGCCAGCTGGGCCTTTTCAGCCAGCCTTCTGCGGGCCTCGTCTCCCCCTacagAAAGCTGCTGTTCGACCTGTCAGAGAACATCGATGCAGATGACCTGAAGAGTATCAAGTTCCTACTGCAAAACAAACTGCCCCGCAGGAAACTGGAGGACAACGTAACGATGCTAAATCTCCTCTTGGAAATGGAGAAGATGGATCTGTTGAGCATTACAAACCTTGAAACACTAGAGGAAGTTATCAGACCGGTCTGCCCCGGTTTGAGAAGAAGAATCATTCAGTTTAAGGAGGAAAACGCAGGGTCAGTCAGCCAGAAGACAGAAGTCTCATATATGAGCGCGAGACAGGCCGAGCCCGAGGAGCTTCATGTCTGTCCTGGAGTCCAGGCTTCTACGTCAAATAACAACAGACCTGCCACTCTAGGAAGTCTTTCGGAGAATGTGATTTGGAATAACTGGAGGCAGGAGTCATCGGGGCCATCACATTCACAAGCCTCATGTCAGGGCCCCTGTGCGCTCTCCTCTGAACCCTATGCTCCATCTCTAGTGGCTGTGGATGCCAGGCCAGGGGGACAGTCGCTCGATCTGAGCCAGCCTAGCAGCAGTGGGACAACAGATGCGACCTTCTCCTCAGagCAAAGGCGCCAGGTGTCTCTCACCTCTCCACGTGAGGAGAAGAATATTAGCGCTGCAAATCCTGTtcaagggaaaaaaaagGAACTAGAGGTGTATGAGATGAAAGATGACAGGAGGAGAGGATTTTGTTTGATCATCAACAACAATGACttctcaaattcacaaaaagaattaaaaaaccGTGAGGGAACAGAAGTAGATGCGAAAAGCTTAGTGGACGTATTTGAGTGGCTGGGCTTTGAGACGCAGACGGAGCGAGACTGCAGCGAGCAGCGCATGCGCTCGCTGCTAGAGGATCTCCGTAAGAAAGACCACACCGCTATGGACTGCCTGGTGTGCTGCGTCCTGAGTCACGGCAAGCGCGGGGCGGTGTACGGGGTAGACGGGGGCGAGTTGCCTCTCAGGGACCTCACGAGGCCCTTCTCAGGGGTCCGCTGTGCCACCCTGCGGGAGAAGCCCAAACTCTTCTTCATCCAGGCGTGCCAGGGCCGGAAGGAACAGCTGGCAGTGCCCGTCGAGTCCGACAGCCCCGAGTCTGGCTCCGCCCAGGACTACCTCACCACCGACGCGTTCGTGCCCCAAGACTCCATCCCCGACGAGGCCGACTTCCTGCTGGGCATGGCCACCGTGCCAGACTTTGCCTCCTTCAGACACAGGAAGGAGGGCACCTGGTTCATTCAGTCGCTGTGTGAGAACCTCGTGCTGCTGGTGCCCAGAGAGCATGACCTGCTCTCCATCCTGACCAGGGTCAATGATGATGTCAGCCGTAAGACAGATAGATGGGGCACCAAGAAGCAGATGCCTCAGCCTGCGTTCTCACTTCGGAAGGGGGTCGTCTTCCCAGTGCCACAGAGGCCACCGCCCAAAATAAAGGCCCAAGCCTCAACATGAGCCGGATGGACAGCCTAAACATGCCACATCATTAAGGGAGCCCCCCTCTGTCCCCAGAAGCCCAGCCTCACACAGCTTCAGCTACCAGCTTCAGTTTTACCCGATGATTGCTGTACATTTTTGGAGTATTTTTAtatcatcatttttttaatgagatgTAAACTGTGATTCTATTATAAAGGGTATTTcaaacatttatatttcttaaataagagcacaaaaaaaacaacctgatGTTGAATATTAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00656	Peptidase_C14	Caspase domain	Domain	Interproscan
PF01335	DED	Death effector domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001309	Domain	Peptidase C14, p20 domain	Interproscan
IPR001875	Domain	Death effector domain	Interproscan
IPR002138	Domain	Peptidase C14, caspase non-catalytic subunit p10	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR011600	Domain	Peptidase C14, caspase domain	Interproscan
IPR015917	Domain	Peptidase C14A, caspase catalytic domain	Interproscan
IPR016129	Active_site	Peptidase family C14A, His active site	Interproscan
IPR029030	Homologous_superfamily	Caspase-like domain superfamily	Interproscan
IPR033139	Active_site	Peptidase family C14A, cysteine active site	Interproscan
IPR051290	Family	CASP8 and FADD-like apoptosis regulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48169	DED DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004197	Molecular Function	cysteine-type endopeptidase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008234	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-