Gene detail

Detailed information of KAJ8392942.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8392942.1	DEATH EFFECTOR DOMAIN-CONTAINING PROTEIN	AAFF_1.1_unplaced_142	2319927	2338029	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00071460

AAGATAAGTGACATCAAATGTGACCAATGGGAAAATCTGGCTGACACGCCCATTTACTCCTGTAGACCTCCGTCTTGTTAATTCCTAGTTGCGGAGACCCCATTCTTGTGTAATTTCCCGTTTAACGCAATACATTTGGATTTAGGTGCTGATTGATTATATGTTCAGTGCCAAGGCTGCCTAGGTCACATTTGAATCtgaatcaaaatacaaaataacaagtTTCACTATCCAACATGGCTGTGTATGACAGTGGTCGTTTGTCAAAATTCTCTCTCACTGattggttgtttttttgcctttgtGAAGATCAGCGTTGGTATGGGTGGTAGGAGGTGTGCTGTGCAAAAAGCTCTGTAACGTTATCGAGGTGGCGTCACTAGGGTCTAGATACACGGAAATTAACAAGCTTGAAGCACCTGCACTGATCTGTGGAAACATTTCTTGAGAAAAACGATGTCAGCAATGCGCAGACCAAGGTACTCTTTGCTGTGGGAGGAGACCGAGTGCCTGACTTACTACGGCATGCTGTCCTTTCATGAGATCTTCGAAATCGTCGGTTCCCAGTTGACGGAAACTGACGTGGAAGTTCTGTCGTTCCTCTTGGATGAAACGTACCACGGAACACACCCCCTCGACCCAGCAGGTTGGACCCCCGAGGTTTGTGCCGAAAACCCGGAGCCGAGTGCGGTTGTCTTCCCCAATCCAAGGCTCCTGGAGGCCTGGCGTCGGCTACAGCCCAGGGGCTGCCCATGCCCTGCCGCTGCTCGGCACAAGCCGAAGAGCGGGTTAGATCTGTTACTGGAACTTGAAAGACGTGGGTACCTCAACGAGGGAAACCTGGAACCACTGTTGCAGCTGCTACGGGTACTGACGCGACACGATCTCCTGCCTTTTGTGTCTCGAAAGAAACGGAGGACAGTGTCCCCAGATTGTTATTCTGTCGAGTATTTTGGCGAGGAAGGTAGAGGAGTTGCCTCAGCTGGGTTGATGGACaccaatggacagacagacTCTTCTCAGGACCAATTGCCGCGGCAGTGGAGGGCAGGCGTCGACCCCTCCCGACCAGCACCCACCTCAACTCGCCGGAAACGGGGTCGAGGTCGCCGCCGCTCCAGTGCGGCGGGTGGCGCCGGCCGCAGAAGGATGGCCGAACTGCAGGAACCCCTCCCGCAGCAGCAGTTGCAGTCCACCCAGGAGAAAATCACCTGTGgttgaCTGAGGATTGAGACTCAGATCGGGTaggaaacacacagagagagagagagagggagagacttcATTGTGTCAGTCCCGTCTCTCTTTCCGTATGGTCAGCGTGTGCTCGCTCGCGCTGTCTCTCACGGTCGGCCCAGTGTCCAAGTTCAAAACAGACTGACTCGTGTCAGGGATACACAAGTTGGTCGTCCGCACAGGCATacaatgagagggagagaatgaacacaaaacgatcgaacaaacaaacacaaaagggtGAGGCAGGCAAAGCGGGCAAAGAGGGTCGGACAAAGAGGTCTGTCCGTCCGTTGCCCCCCCTCCTTTTGTTCTGTCGTGTGTGGCAGAAAAGCGGATCGATAAGCGGAGTCCAAGCTCTTCGCGCCAAAGCGACGCCTCATAAATGTTACTTGCATTTCTGTTGgggatggaggaggggggggggggacacagagGAAACCAAACTGGGCCTTGTATGAACGGGGGGGAAATCAAAGCTGTGCCTCTTTATGTGCTGTCTAATGGATCTTTTTGCTCCTGTATAATGAAGTGTAAAGTGGCCAGACCACATCCCCAGTGTTCATCCCAAACAGTCCTGGTGTACTAATACGGGTGTGTACAGATCAGCCCCTAGGCTCAAAGCTCCTGTTAGCCTCACATGCTGCCATGCCTTTGCCTGGGTTAGCGGGAGCCAGGGGCTGTGACGTACACATCCTCAGAGCTTTACATTGGGAGATGACCTTAATAtagcagggctgtgtgtgaTCTTTACAGAACACTGATCATATCGGTATGAATCTGTAATAATCCAGAGCGTAAATCACGTGCACCAAGTTCCTCTGTCATGTTTCTGGGGCATCttcacatttcaaatgtaattccTCCAGATTGATGTATCCGTTGAAATAAACAGTCTTAAATTAAGCAGCAGAGCTATCCCTGCTGGACCTTTGGAGCAGGATCTTATGACCAAAGGTTTGTACGAGTTTGCCTTCACTTCTAATATTAAATTGCAGCCAGTGTCGGCTTATTTCAGGTTGAAGGCAAAGGCACTTTGCTTGATTTGGGTCCCACCTTGTGTTCTGAAGAACCTTGCTAAATAAGTTGCCGTGTTGTAGGCCTGTTTACACAGTCTGTGTTCTGTGAATCAGTTCATGCCGTTGCTCTGTCCCAAATGGGGTTTAATATTCACTATGGGCAGCTGACTTTTACTGCAGCCATAATGTGTCACAGTGTTAATGTGAATATAGGACCTTATTCCAGTTAATGTGCCACGGCTGTCCAGTGTCAACCAAGAGCAGTTACCCGACCCTCCTCTCCCttgagcaaaaaaaaagcaaagaaattGAGCAATGTcagtatgtatttttatgtttttcgtTTCTTTGAGAATGTCATGAGTTTGTAAAAAATGGAGAAACTGAGATATGTCGTTTCATGACTTGATTCTGTGGAATCtgttttaacaaaaaaagaaataccaCACAATGATCTCTTCTCGCGTCCAGTTTCTGTTTGCCATCCAACACCTTGGAGATTATATTCTTGAGCCCAGCACTGAAAGCACTTGGAAATAACTGGTGATCCAAACGaaccaaaaaatttgaaatggcccatacaaaagtaaataaataaatcatttattaatttaaccaGCGGGcactttatttttactttcataaGAAGCTTCTGGgctgtttttttaatactttgCACACTGATAGAATAATGAAATGGCCATTTACAATACTTAATTTGTGGTGGGTTCACTGACAGTGCGTTAAAGATCTGCAAATTCCAGGCCTTATCTTTAGATCGATGCAATTCACTGTCTGGGCATTCCACTgttgaattagaaatatttCTCCTTATTGATTTTCAGCTTTTGGTTTGACAGTTTTCAAATAGCTACAGTACTAATGACAATTATTTTTGAGGAGATTTTCTCTATGGCAAACATCCTGTGTAATTGCACTGTAAACTAATTGGCACTATGTGCTCCCACACCTTTTAACCATTAGCAGGAGAGATGTACGGTTCTACTTTCTGATGACAAATGCATATTGGTCACATTCATCTGTTAGCTGGATGTTCACCATATAATGAAGTTTGGGTACAAATGTTGTCttgattttatgatttttaaaaaaatctattttttaaatgtttatttttgaaagtgttAACTAATTTCACTCAAAGTACAGCCAATCTGAGTTCATCCTGGAAATCCCACTTGGAAAAGGGGTGCGCTTTCCATGTTATTTGTGGGACACGGTAAACCCTGACTGAGTAGAGAGCAATTATGAGCTACCTGTACGTGCGTAAACTCTCAGTAGTTTATTAAATACATCCCGAGCTTGTGCCCTAAAAATgataactgaaatgtaaaaatgtgtttcccgAGCCATCCAGAAACGTTTGACGAGCGACGCCAAAGAAACCGCACTAGGTTTTTGTGAAACCACAGAACGTTTCTCGATGGCTCGTGACTCTTGATATTTTGTCGTTTTCACTGCGGTGTTGCTTCCTCACAAGGCGCACAGCAGCATGTTCAGAAGGACCGTCTTCCCCCTGCAGCTTGTCCCATAGCTCACAGACCACCTGCTGGGATCCCTCTCAGCTGGTCAGCTGCACAGCGTGAAATGGTAAAGAAATAGCCTGGTGTCACCAGCAAGCCTTTAGTATGgccctttttttttcccctcaagccTTCACCATGGCTGCAAACGGAGATGTGGAAATAGGGCGGACGTGAGGGAGTTTTCTCAGTCCCCCTTGAATTCAAGGAGCAATTCAAAGAAGAACGTTGGGAATTATCGTTGGCACGCTGCTATAAAATCGGGTCTCCTGAAACGCAGTATTGGAGATGCGACACAAGGGAGCAGCGGCCGGTGGTTAGTGTTTTGTCTTTCACACATTGCCAAATGTTCAAATTTAAAATGAGTTGTACGTTTCAAATTAAAAGGGCAAATCagtaattacattattttggataatgttttaaaacgttattttttttatttttttatgcaagGATGATTTTGGATCATGTTTAACACCATGGCATTAAGCATGGtgattaatttgtttcaatCTGAGCCTTGAGTCAACTGTAGTCATCATGCTTGATTCAGtagttattgtattatttttctaatCAATTTATGACTATTCCCGGCATATATGTATAACGGAATATACTTttctttatataaataaaatttagaAAATTGTATTATGAGTTAATGAAACTCAGTAAAGTTCCTTTTATGTAAGTACCAGTGCGGCCATCTCTGCACACGTAACTGACCTGAATAAAAAAGCAATGCTGAAGCTCATTGTATACCTGTGATGGAGGGGGAATGAAAACAATAGATTTGTTTCAGCTGAGGATTTGTAAAACCGTGGTGCCTGGCCCATTTTCCACCTTCCCTCAATTGCCATTTTCTTCCTTTCTCCTGAAGCTGTGAAACCCCCAGCGCATtttccttccccccctctctctccctgccctccATCCATCCCCATTGACTTTTGACCTTCAACCCTCCACGCTCGCCTCTATGCCGAGCCAAGGGGTAGTTTGTGTTTCAGTGCGGTTTGAGGACCGATCGCCCGCCCAGAGGTAATGACAAGAAGAGTGCTGCCAAAAACCCAGCTGTCCAacatCCGGCTGCGCGTGCGGGCCGAGTACTCGGAGCACGAGTCGGCACTGCGGGGCGGCGTCTCCTCCGACAAGCAGCAGCCCCTGGAGCGGCAGTTTGAGCTCTTCAGCCGGGCGAGCTCGGTGCTGCGGGCCCGCGACCTGGGCTCCATCATCTGCGACATCAAGTTCTCCGAGTTGGGCAACCTGGACGCCTTCTGGGCCGACTACCTGAGCGGCGCCCTGCTGGAGGCCCTGAAGGGCGTCTTCATCACGGACTCGCTGAAGAGGGCGGCAGGCCGAGAGGGCGTGCGACTGCTGGTCAGCGTGGACCAGGACGACTACGAGGAGGGCAGGAGGCTGCTGCTGGAGAGCCAGAACAGGGCGTGGAACTGGGCCGGGACCAGGTCCTGACCAGCTTATGTTGATTGGAGAATGAGGGATGAAGGCGGAGGGAGAAAAACGGACCTGGAGCCCTTAGTCCTCTCCCGTGCTTTCTCCCTCCGTTCCGAAGGCATGGCCTACGTCCAAATGCACAGGACCCCAGAAGCACCAAGCCTGAGAAGAAGACAAACTTGATGAAAGACTGAACACACGAACCTCTCTGTACAACGCACACGTTAAACTGAGCTGTGCCACCCTGTGGCCTTGTGAGACTACAGCTTTCTGTTCCCCACTGCAGGctgacgacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatacaccgcTAAGTGTTCCCATGATACTTTGAAGTAAAGAGACAATGTACCTGGAATTGAGGTGTTTATATGACCTGTGGAAATGGCATTGAGGTGGTAATCAGATTATGTTTGTCACAGTGTTATAACACGAGCTGCCAATGACCGCTATGGAATACCACACCGATGGGagatttatttcagtttaatgGACATAATATAGCTTTGAAAGATAGAGAGTGCTGTTATTGAAGGAGAGGGATTCTGGAAACAATGAAAGCAGTTATTAACGGAGCGGGAGAAAGAGAAGTTTTGACCCTGTGAtgaaggagagaaggaaagcCAGGGCTCAATGTGtcaaaggagaggaagagagacgaGTGTGGGGCAGCGTTTATCCAGCACTGGTCCTGTAGGGTCGAGTTCAACTGACTCCATTGTAGCCCCGTCCACAGCCCCATGTTTTAGCTGGGCGATGTCGCGCCGTCCATGTCCTTCTGGAGCAGAGGATTGTGGGCACTGTGGGAAAGTGGCCAGGGCGGCTCCTCTGGCGCGGCACCCAGAGGAGGAAGTTTTTTTTGCCCCTCGGTGGTTCCAGTGAAAACAAAGCCATTAACACTGGCTCTGGAATTCACACCGAGGCCTTGGGCTCAACCCCGCTAAGTGAGTCCGGTAGGGGACAGTGATTTGGTCAATACAGCGATGATTGAGATTACATGAACAAGATGTCCAGCTCTACCCTGCTCTGGCTCTACTCACAGCCCAGCGAGCACATCTGTGGAACTAATGCCTGAGCTTCGTTCATTGCGATCAATAATGTCCTCCTAAGTCCTCTCATCCAGGGGCAATTTTAGGGGTTGGCAGCTGCTCTCGTCTGGATCAGACCTCTTTAGTACCCGGTTCAGGGGAATTTGGGGATGACAGTGTACTACagtgtacattttgtgtgtatatgcattcaTATCTGATATTGTTGTGTACAGTAGTTCAGAGTAGAAAACTAGCTGAATGTAACCAATGATAGATGGTAATTATAGACTGTACGGGTGACCTTTTGTTTAAAACCCaggagttttggggcatggcaacagattctttttttttttccttttggaaaCCTCAATTTAATGTATTGGTGgaaagtgaaaaaataaaatttgtaattaaaataagttctttgtcagaaaatatattttttgtatccaTGTTGGCTCCTGTTTAAACATGGTTAATCTGTGATTGTGGATGGATTGTGTCCCtcttagcaaaaaaaaaataggcaGCGGTGTAGTGCG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01335	DED	Death effector domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001875	Domain	Death effector domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR038856	Family	Death effector domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15205	DEATH EFFECTOR DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0006915	Biological Process	apoptotic process	Interproscan
GO:0008625	Biological Process	extrinsic apoptotic signaling pathway via death domain receptors	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-