Gene detail

Detailed information of KAJ8390134.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8390134.1	CASPASE	AAFF_1.1_unplaced_173	717915	727961	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00110080

ATGTTAGCAACTGGAATTGACATAGGAATGGACGCCAGGCACAAGAAGATTCTTCAGAGCAATCGGTCCAATCTCGTTCAGGAATTAGACCCATCAATGCTGTATGATGGACTACTGTCGAGGGGGGTTTTTACCCAGGATATGATAGATGAAATACAGAGTGCAGGGACCCGTCGGAACCAGGCCAGGCAACTAGTGAGAGACCTGGAGACCCGTGGGAGCCGGGCGTTCCCAGCCTTCCTGGAGTGCCTTCAGGAGACTAGACAGGACCACGTGGTGCACTTACTACTGGATGGGGACTCACCCCGGCCATCTGTGCCCAATCCTGTGCGGCCTACTCTTCTGCCTATGCCACTTAACAAACCCAAGGACATGCCTGACAGAGTTGACATCACCCCTCAACCAGATGTGACTGTGCATCCCACAAAATTAGATCCTCTTCCTTCACCATACCAAGAAAAGGGCAAATTATCCCCTAGGCCAATTGGAAGACAGAGACGGGACAGTATCCAGAACTACAAGATGGATGCAAGCCCATGTGGGCACTGCCTGATCATAAACAATGTGGATTTTGAACCTCAGTCTGAGCTGAATAATCGTAAGGGCTCTGATATAGATTGTGACCGGCTGGAAAGACGCTTCAAGTCCCTCAACTTTGTTGTCCTTGTCAAGAAAAACCTCAAACAAAGGcaaataaaacaagaacTGTCAGACCTCTCAAAGGTAGATCATTCCAAATATGACTGTTGTGTGGTGATCGTCCTGTCACATGGCACTGAGGCGAGCCATAGTCGCTTCCCTGGTGCCGTGCATGGAGTGGACGGGCCTTCAGTCCCAGTCCAGAACATCACCAGCTACCTCAATGGCCAGCACTGCCCCTCTCTGCAGGGCAAGCCCAAGCTCTTCTTCATTCAGGCCTGTGGAGGAGGTGAAAGAGACACTGGGTTTGAGGTCTCTCCCGATGAGTTCAAACCTTCAATGGGTGGTGTGGATGATCAGACCGATGCCCTTCCCATGTCCTCCAGCAGTGACTCCCTCAGTATGTCAGATGAGCCGGACGCTAGGGCAACACTTCCCACACCCAGTGATATCCTGGTTTCCTACTCCACCTtcccagGATATGTGTCctggagagacacacagacaggctcCTGGTACGTGGAAACCCTGGATAACATCTTGGAGGAGAATGTGGGGACTAATGACCTGGTGACCATGCTGATGATGGTCAACAACGAAGTCTCCCAGATCTCCGCCAAAGGCCTCTACAAACAGATGCCGGGATCCTTCAACTTCCTACGCAAGCTATTCTATTTTCAAGCTCTGCCTCAGTGATAGCTGAACTCCCCCAGTTTCAGCACAAAGCTTAACATAACACTCAGGGTACCTCCGAGTACAATCAAGACTCACCTCTTACCCAGCATATTGGGACCAGGATTGTGGAGCCATGTTCACATTATGTTTTTTCTATATGTACTTCAATGTAGTGAATTCAATCATTTACGTGAGAAAGTGAATAATGTTCATACAATGCTGATCATAAACAATACACCTCAGATTTGGTATAAAAGTATGCCTTtggccaaaaaaaaactaaaatgcagTAAAAGAGAGCAGCACGTTaagcaattaattaattgcctGACTTTATTGGAGGGTAGAGCACTTCAAATCAACACGGGCCATCATTCAATAGAAAAATTACTTTTAATGAGCCATGTAATGCTATAATGTGGAGCCTCATTGCAATGAGTCATTCtccttcatttagattttttttgtgttggtgTTAAATTTTTGTTTAGCCAGTAAAAAGTAAATTTttcaaacattgttttaaaaaaggatgcatatgaaaaaaatacaacatatCATATAGGATAAACTCCCACACACATAGCAATTGCACATTTATCTGTGCtaacattttggtcaaaaacctTCCTCAGACCTTCCACCATTGTTCTCTGAGCATTGCACATTTTTGTTTAGCAAGTGACATGAGTTTGGGTATTGTGGAAATGAATGATAGTTAAGATGTTGGACATTAAAAAACACTTGCTTTAGGGCCCCCCAGGTAAcccaaccggtaaaggcacttgccctgAGTGCAGGTCGCCAGCGCAGCACTGGCTGGCAGTTGTACTCAGGGGATTACTATTTTTCAAAACACTTGCTGTAATTAATCACACTTAAGGGAAAAGTTATTTGTAGTGAGATTTCTCAGAGACTCCTAAGTAAGCAATATTGTAATAAGGAAATCCTgtgcaactttttaaaaacataatattatgTGACTGTTTGACATGCTTTTACTGACTTTCTCCAGCTtggaaatgtaattgtaaatatggaattgtttttgtactttgaatATAATTCAGATTTCTCTTACTGCATCATGACTTAAAGATTAAATTCCTTCATGAAAACATCAGTCAATGGATGTGCTCTTTCCTCACTGTATTATCTGATGACGGACGGGATAATAATGGCATGTTTGGCATGGTGATTCAGAGAAGTGGCTCTAAGGAACATATTTCGCCCCCTTACCTAAGCCCAAGTGTGTATTCCTGTAGCCGACCCAGAGACCTAAAAGAGCAGATGTTGCCAAGCAACAAGACCCAGGAGGATGGATTTGGTTGTCTTTTGGGAAGTCACCAGCTGAATATCAAGGGTGTTTGTGCACAGCTGCACATTGATTTCATGTGCTGCACATATGCAAATATGAACATTGGCAAAGGTaactacaggcaactgccaaaataaaggaaacatgtaaatgagggatactggtggctctgttatggtgtggggtgcattttcctgggatggtttagatccactgaacctcttagagggcaaggtaaatggcaataaatacaaagccattctgagcgatcaccttcatcttctggtgaagcatttctatcctgatgggagtggactcttccaggatgacaatgccccatccacagggcacgagtggtttgactgaatggttttatgagcatg

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00619	CARD	Caspase recruitment domain	Domain	Interproscan
PF00656	Peptidase_C14	Caspase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001309	Domain	Peptidase C14, p20 domain	Interproscan
IPR001315	Domain	CARD domain	Interproscan
IPR002138	Domain	Peptidase C14, caspase non-catalytic subunit p10	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR011600	Domain	Peptidase C14, caspase domain	Interproscan
IPR015917	Domain	Peptidase C14A, caspase catalytic domain	Interproscan
IPR016129	Active_site	Peptidase family C14A, His active site	Interproscan
IPR029030	Homologous_superfamily	Caspase-like domain superfamily	Interproscan
IPR033139	Active_site	Peptidase family C14A, cysteine active site	Interproscan
IPR042147	Domain	CASP9, CARD domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10454	CASPASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004197	Molecular Function	cysteine-type endopeptidase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0006915	Biological Process	apoptotic process	Interproscan
GO:0006919	Biological Process	obsolete activation of cysteine-type endopeptidase activity involved in apoptotic process	Interproscan
GO:0008234	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0008630	Biological Process	intrinsic apoptotic signaling pathway in response to DNA damage	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan
GO:0043525	Biological Process	positive regulation of neuron apoptotic process	Interproscan
GO:0097153	Molecular Function	obsolete cysteine-type endopeptidase activity involved in apoptotic process	Interproscan
GO:0097199	Molecular Function	obsolete cysteine-type endopeptidase activity involved in apoptotic signaling pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-