Gene detail

Detailed information of KAJ8389150.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8389150.1	WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED	AAFF_1.1_unplaced_186	1426715	1459669	+

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00123560

ATGGAGACTGAAGAAGGAGCCGGTGGACCGGGTTCGCCGGGGTTATGCTGCGCCTCCTTCAACCAGGACACCACGTCGCTGGCCGTGGGGAACAAGACTGGATACCGACTCTTCTCAGTGACCTCAGTGGATAAACTGGACTGTGTCTATGAAAGCGAAACCCCAGATGTTTACATCGTGGAGCGGCTGTTCTCCAGCagcctggtggtggtggtcaGCCAGGCCACGCCCCGTCGTATGAACGTCTATCACTTCAAGAAGGGAACGGAGATATGCAACTACAGCTACTCCAACAACATCCTGTCCGTCCGCCTCAACCGACAGAGGCTGGTGGTGTGTCTGGAGGAGTCAATCTACATCCACAACATCAAGGACATGAAACTCCTGAAGACTCTGCTCAGCACACCACCCAACCCCTCAGgtcTTTGTGCTCTTTCCATTAACCATTCCAACTCGTACCTGGCGTACCCCGGCAGTGCCACCATCGGAGAGATCGTTGTCTACGATGCCAACAACCTGAACACGGTAACCATGATTCCAGCTCACGACAGTCCCCTGGCAGCCATCACCTTCAATTCCTCGGGCACCAAGCTGGCCAGTGCCTCAGAGAGGgGCACTGTAATAAGAGTATTCACTGTCCCCGAGGGACTCCGACTGCTAGAGTTCCGCAGAGGGATGAAGAGGTACGTCAGCATCAGCTCCCTGTCCTTCAGTCCAGACAACCAGTTCCTCTGTGCCTCCAGCAACACAGAGACAGTGCATATATTTAAACTGGAACATCCTGGCCCCAGTGGGGAAGAGTCGTCCGCCACATGGTCGGCCTACATGGGGAAGATGTTCTCCGCCGCCAGCAGCTACCTCCCAGCACAGGTGTCCGACATGATGAACCAGGACCGCGCCTTCGCCACCGTTCGCCTCGACGTCTTTGGTCAGAAGAACGTCAGCGCACTGGCCACGATCCAGAAACTTCCGCGTCTTCTGGTGGCTTCCTCCGACGGGCAGCTCTGCATCTACAACCTTGACCCCCATGAAGGCGGGGAGTGTGTCCTCGCCAAGAAGCAcagGCTGTTCGGCTCGGACGAGGAGCGGGGGATGTCAGAGGAGGAGTCTGGGACCGCGGCACCTGCCCAAACCTGCCAGTCCTACGCTGCCACTGTCGCCATCTCTGCTGCCACGCCCTCCTCCACCACTCTGACAGGTTACTCAGAAGATGGGGGAGCAAAGAAAGGCGAGATCATTCCAGAGCACGAATTCGCTGCGGGACCCGTGTGTCTGGATGACGAGAATGAGTTTCCTCCCATAAATTCGTGCCGCGACGGGACTGGCAGTGGCAAAGGGAGACGCACTTTAACGAGATTTATCAGCCTTCCAGAGTCGTCTCCTCGCTCAGCCATGACGAAGCAGAAGTGTGATGCAGGAGGATGCCTGGGTCCTAAGGTGTTTACCTACGGCGTCATCAAGAGCTTTGGCGTCTTCCTGCCGGACCTCATGAGCGACTTCAGCGAGAGCAACAGCCGCGTGTCCTGGATCGTCTCCATCTGCGTGTTCATCATGACCTTCACCGCTCCGCTCTCCTCAGTGATGAGTAACCGCTTTGGGTTCCGCCCTGTCGTGATGCTGGGGGGGGTTCTCATCAGCCTGGGCACCATCACCTCCGCCTTCGCCAACTCCGTCAACGAGATGTACATCACCATCGGAATCGTCTCAGGGCTGGGCTACTGTCTGACCTTCCTGCCCACGGTCACCATCCTGTCTCAGTACTTCACCACGCGGCGGTCCCTCGTCACCGCCATCGCCTCCACCGGAGAGTCCGTCTCCATCTTCGCCTTCGccccagCCTTCTCGGCTCTGAAGGAGCAGATCGGCTGGCGGTACTGCCTGGTTGTGATCGGAGTCCTGCAGTCCAGCATCATCATCTGCGGCGCCCTCCTCAGGCCCATCGTCATCAGACCCGCGAAAGGGGAGGGGGCCGGCGAGGAGTCCCCCCCACAGCAGGCCGAGGGCACGTACGCCATTGAGAACGAGAACACGCGCACCTCCATCAGCACCAACGACTCCGGGGTGCAGTCGCTGAGCTCCTCCCGCACGGACCTGGCCGGCGAACAGGACGCCCCGGGGCGGGAGGCCCTGGCGTCCGAGGAGGAGGCGCCGCTGGGCGAGGGCTCTCAAGCCCCGCCCCCaaccccggccccgccccctcccgcggccccgcccccggccccggccAAGCTCCTGGACTTCTCGGTGCTGCGGGACGGCAGCTTCATCTGCTACGCCCTGTTCGGCCTCTTCGCCACGCTGGGCTTCTTCGCCCCGCAGCTGTACGTCATCCAGCTGAGCGTGAGCCGCGGCGTGCCCAAGGACCGCGCCGCCTACATGCTGTCGTCCATGGCGGTGGCGGAGATCGTGGGCCGCCTGTCCATCGGCGGCGTGCTGAACCGGACGCCCGGGCGCAAGGTGTACGTCCTGCTGGCCTGCGTGGTGCTGCTGTGCCCCGTGCTGGCGTCCTTCGCCGTCGTGCAGGGCTTCTGGGGCCTCAGCGTGTGCTGCGTGCTCTACGGCTTCCTGCTGGGCACCGTGGCGTCCACGCACATCCCCATGCTGGCCGAGGACGACGTGGTGGGCATCCAGAGGATGCCGTCGGCCGTGGGCGTCTACGTCTTCATACAGAGCTTCGCCGGCCTGGCCGGCCCGCCGCTGGGAGGTGTCCTGGTGGACATCACCGAAAACTACGGCTCCGTGTTCTACTCCTGCACCGCGGGCATGGCCCTGGGGGCGTTCTTCCTGGGGCTGGTGCGTCCGGCGAAGGCCTGGCAGTGCtgcgccagcagggggcgccggcgggacggggacggggaagaggaggagggggaagaagaAGGAGCTCGAGAGGCTCGCGGCCCCTCAGGCCAACGAGGAGACGCCAGAGGACTTCCTGGAGGAGGACTTCCCAGTGGAGACGAGACCCGCCAAACAGCAGAGCGAGGGGGGAGTGGTTTGAGAAGCGGCGTGGGAATTGGGACCGCAGTCAGACTCAGTCACAACAATCTGAAGGCAAAGACAAAACAAGTCACACTGGAGAAGGAAAtgtggacaaaaaaataa

Transcript

AAFF_T00123560

GTTCAGCGTCGAAGTGACGCTACCAGCTGTcagctgtttgtgtttttgctttattttttaggTCTACCTCTTCAAGTTAGCTGCCCATCTTCTCTTAAAAACGGAATATAATTACTATATATACGATTCTGGATTAAAGCAAGACGCGGAAATAAACGCCCTACGTTAACGTATCTTTAAAAAGTAGCTATCTAGCGACCTAGATAGCTAGCTTCATCTAATTTGTTACCGATTGGCGGAACCTTTCGGTTTGAAAACGGTTTTGAAGAGGAATCAAACGGACCCCAGGCCTCCAATCCagggcggagggagggagggaggtcgCTGGGATCGGGATGGAGACTGAAGAAGGAGCCGGTGGACCGGGTTCGCCGGGGTTATGCTGCGCCTCCTTCAACCAGGACACCACGTCGCTGGCCGTGGGGAACAAGACTGGATACCGACTCTTCTCAGTGACCTCAGTGGATAAACTGGACTGTGTCTATGAAAGCGAAACCCCAGATGTTTACATCGTGGAGCGGCTGTTCTCCAGCagcctggtggtggtggtcaGCCAGGCCACGCCCCGTCGTATGAACGTCTATCACTTCAAGAAGGGAACGGAGATATGCAACTACAGCTACTCCAACAACATCCTGTCCGTCCGCCTCAACCGACAGAGGCTGGTGGTGTGTCTGGAGGAGTCAATCTACATCCACAACATCAAGGACATGAAACTCCTGAAGACTCTGCTCAGCACACCACCCAACCCCTCAGgtcTTTGTGCTCTTTCCATTAACCATTCCAACTCGTACCTGGCGTACCCCGGCAGTGCCACCATCGGAGAGATCGTTGTCTACGATGCCAACAACCTGAACACGGTAACCATGATTCCAGCTCACGACAGTCCCCTGGCAGCCATCACCTTCAATTCCTCGGGCACCAAGCTGGCCAGTGCCTCAGAGAGGgGCACTGTAATAAGAGTATTCACTGTCCCCGAGGGACTCCGACTGCTAGAGTTCCGCAGAGGGATGAAGAGGTACGTCAGCATCAGCTCCCTGTCCTTCAGTCCAGACAACCAGTTCCTCTGTGCCTCCAGCAACACAGAGACAGTGCATATATTTAAACTGGAACATCCTGGCCCCAGTGGGGAAGAGTCGTCCGCCACATGGTCGGCCTACATGGGGAAGATGTTCTCCGCCGCCAGCAGCTACCTCCCAGCACAGGTGTCCGACATGATGAACCAGGACCGCGCCTTCGCCACCGTTCGCCTCGACGTCTTTGGTCAGAAGAACGTCAGCGCACTGGCCACGATCCAGAAACTTCCGCGTCTTCTGGTGGCTTCCTCCGACGGGCAGCTCTGCATCTACAACCTTGACCCCCATGAAGGCGGGGAGTGTGTCCTCGCCAAGAAGCAcagGCTGTTCGGCTCGGACGAGGAGCGGGGGATGTCAGAGGAGGAGTCTGGGACCGCGGCACCTGCCCAAACCTGCCAGTCCTACGCTGCCACTGTCGCCATCTCTGCTGCCACGCCCTCCTCCACCACTCTGACAGGTTACTCAGAAGATGGGGGAGCAAAGAAAGGCGAGATCATTCCAGAGCACGAATTCGCTGCGGGACCCGTGTGTCTGGATGACGAGAATGAGTTTCCTCCCATAAATTCGTGCCGCGACGGGACTGGCAGTGGCAAAGGGAGACGCACTTTAACGAGATTTATCAGCCTTCCAGAGTCGTCTCCTCGCTCAGCCATGACGAAGCAGAAGTGTGATGCAGGAGGATGCCTGGGTCCTAAGGTGTTTACCTACGGCGTCATCAAGAGCTTTGGCGTCTTCCTGCCGGACCTCATGAGCGACTTCAGCGAGAGCAACAGCCGCGTGTCCTGGATCGTCTCCATCTGCGTGTTCATCATGACCTTCACCGCTCCGCTCTCCTCAGTGATGAGTAACCGCTTTGGGTTCCGCCCTGTCGTGATGCTGGGGGGGGTTCTCATCAGCCTGGGCACCATCACCTCCGCCTTCGCCAACTCCGTCAACGAGATGTACATCACCATCGGAATCGTCTCAGGGCTGGGCTACTGTCTGACCTTCCTGCCCACGGTCACCATCCTGTCTCAGTACTTCACCACGCGGCGGTCCCTCGTCACCGCCATCGCCTCCACCGGAGAGTCCGTCTCCATCTTCGCCTTCGccccagCCTTCTCGGCTCTGAAGGAGCAGATCGGCTGGCGGTACTGCCTGGTTGTGATCGGAGTCCTGCAGTCCAGCATCATCATCTGCGGCGCCCTCCTCAGGCCCATCGTCATCAGACCCGCGAAAGGGGAGGGGGCCGGCGAGGAGTCCCCCCCACAGCAGGCCGAGGGCACGTACGCCATTGAGAACGAGAACACGCGCACCTCCATCAGCACCAACGACTCCGGGGTGCAGTCGCTGAGCTCCTCCCGCACGGACCTGGCCGGCGAACAGGACGCCCCGGGGCGGGAGGCCCTGGCGTCCGAGGAGGAGGCGCCGCTGGGCGAGGGCTCTCAAGCCCCGCCCCCaaccccggccccgccccctcccgcggccccgcccccggccccggccAAGCTCCTGGACTTCTCGGTGCTGCGGGACGGCAGCTTCATCTGCTACGCCCTGTTCGGCCTCTTCGCCACGCTGGGCTTCTTCGCCCCGCAGCTGTACGTCATCCAGCTGAGCGTGAGCCGCGGCGTGCCCAAGGACCGCGCCGCCTACATGCTGTCGTCCATGGCGGTGGCGGAGATCGTGGGCCGCCTGTCCATCGGCGGCGTGCTGAACCGGACGCCCGGGCGCAAGGTGTACGTCCTGCTGGCCTGCGTGGTGCTGCTGTGCCCCGTGCTGGCGTCCTTCGCCGTCGTGCAGGGCTTCTGGGGCCTCAGCGTGTGCTGCGTGCTCTACGGCTTCCTGCTGGGCACCGTGGCGTCCACGCACATCCCCATGCTGGCCGAGGACGACGTGGTGGGCATCCAGAGGATGCCGTCGGCCGTGGGCGTCTACGTCTTCATACAGAGCTTCGCCGGCCTGGCCGGCCCGCCGCTGGGAGGTGTCCTGGTGGACATCACCGAAAACTACGGCTCCGTGTTCTACTCCTGCACCGCGGGCATGGCCCTGGGGGCGTTCTTCCTGGGGCTGGTGCGTCCGGCGAAGGCCTGGCAGTGCtgcgccagcagggggcgccggcgggacggggacggggaagaggaggagggggaagaagaAGGAGCTCGAGAGGCTCGCGGCCCCTCAGGCCAACGAGGAGACGCCAGAGGACTTCCTGGAGGAGGACTTCCCAGTGGAGACGAGACCCGCCAAACAGCAGAGCGAGGGGGGAGTGGTTTGAGAAGCGGCGTGGGAATTGGGACCGCAGTCAGACTCAGTCACAACAATCTGAAGGCAAAGACAAAACAAGTCACACTGGAGAAGGAAAtgtggacaaaaaaataaactattcga

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan
PF21032	PROPPIN	PROPPIN	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR030766	Family	Monocarboxylate transporter 7	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR048720	Family	PROPPIN	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11227	WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000422	Biological Process	autophagy of mitochondrion	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006497	Biological Process	protein lipidation	Interproscan
GO:0019898	Cellular Component	extrinsic component of membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0032266	Molecular Function	phosphatidylinositol-3-phosphate binding	Interproscan
GO:0034045	Cellular Component	phagophore assembly site membrane	Interproscan
GO:0034497	Biological Process	protein localization to phagophore assembly site	Interproscan
GO:0044804	Biological Process	nucleophagy	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0080025	Molecular Function	phosphatidylinositol-3,5-bisphosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-