Gene detail

Detailed information of KAJ8388304.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8388304.1	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40	AAFF_1.1_unplaced_196	90467	115255	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00134580

Transcript

AAFF_T00134580

ATGACCAGAAAATCTGATTTCAGCGAGGTGGTAGGGCGTCAGAACTCCCCTTTTCCTCAGGACAGGCCCCACTCCAGATGGGACAGGAGGGATGGACGTCTTCCGAACCCCGGGAGCTTTGACGGGCTGCACCGTAACTGTAAAGaTGTCTTTCCACAGCAGACTGAGGGGATCAAACTTATTGTGAACAAGACTCTCAGCAGTTTCTTTAAGGTCAGCCACACTTTCCATCTGAGTGCCGTGGCACCATCAAATTATCGCTTCCATGTCTCGTACTTGCAGTCGGACACTGACAGTAAAGAAGTGGACTCCCCCATGTTGATTGGTGAAATGGACTCCTCCGGCAGTTTAAACGCACACTCCCTGTTTCACCTGAGTGAACGAATCAGGGCCAAGGCTGTCTTCCAGaCTCAGCAGTCCCAGTTTGTGACTTGGCAGTTTGAGACCGAGTACAGAGGGTGTGACTTCACTGCGGCCGTGACCTTGGCAAATCCAGACATCCTCAGAGAGTCTGTGATCATGGTGGCACACTTCCTCCAGAGTGTGTCCTCACAGCTGGTGCTGGGAGGGGAGTTGGTGTACCACCGTGGTCGTGCTGAGGAAGGTGGCATTCTCACATTGGCAGGCCAGTATTCAGGGCCAAACTGGGTGGCAACGCTAAATGCCGGTAAGGGAGGTGCCCATGCCAGCTACTACCACAGAGCCAATAAGCAGATCCAGGTGGGGGTGGAGTTTGAGGCGAGCACCAGGACTCAGGAGACCACATTCTCCTTTGGCTATCAGATGGATCTTCCCGAGGCGAATATGGTCTTCAGAGGAATGTTGGACAGCCGGTGCATCATCGGCGGCGTCCTGGAGAAGCGACTGTCCCCCCTGCCCGCCACCTTAATCATGGGAGCCTTCGTTAATCACCGTGGTGACAAACTGCAGTGTGGGCTGGGAGTGAATGTTGGAGCGTGTGCTCCCTCCAATCCGGCAGACCAGAGTGGAAGGCTGATCCAGCAACACTTCCACTCCAAGGCACGAAGAACAGCCTGCAAAGTGAGCTGGAGAGCCACCCATCATGACACACCCTTGGCTGGGCTGATGTTGGGGGGACAGTGGCCAGACAGGCACCCTGATGCAATGATCCAGTCCTCCATCGCCAGCCTTGCATGCCTGCTGTTCTGTGTAGTGATATCAGCAGGCAGGCTATCTCCTCCACAGAACCTGACGGTGGAGTTTCTGGACTTCAGGGGTGAGGTGGCCTGGTGCCCTGGTCCAGAAAACCCACCATCCACTGTATACACTGTGGAGCTGCAGCCAATTGGAGAAGAATGGAGTCAGACGGAGAACTGCGTTGACATAGAATCCAGCAAATGCACTCTCATCTTTAACCTGACAATAAATGACCTGATGACATCCTACTACATCAGGGTCAAAGCCTCATGGAGAGGGGAAAGCTCTGAGTGGACCAGCCTGGATACCGTCCAACCATATGGAAACACTCTGCTGAGTGCCCCCACGCTGAATGTCTCTGTCCAGGGAAGGGACATCTATGTGCACGTCCACATGCCCCAGGACGTGCTCTCCGTGTTGCCCAAGCAGATTTACAACATCCAGGTTTCTGAGAGCAACGGCGGTAACCATGAAGAGAAGAACCCCGGCATTATCTTCAGCACGGGCATGGGATCTGAAAGCCACAGCACCAAGTGTAAGATGGCTGGAGAGTCCACTCTAGTGTGCAAGAGCCTGAACCTGGGCCAGCTGTACTGTGTGAGGGCCTCTGCCATCCATACCCAGCAGCAGAATAAACCGCACCATTGGTCAGAGAAGTGTGTGGATCTGCCAAGCAACACCTCAGATATGCTGAAGCACATCGTTATGGCAAccatcctggtcctgggggtcGTAATTTTCCTGATCTTTATAATTATACACTACTACTTGAAGCCTAGGGAATGTGATCTACACGGGCCCAAATCACTGAGTGTGGTCGGGCGGGCTGATAGGGCAGTGATGGCTGCTCCAACTGAAGCTCTCACCATGTCGGACGTCCAACTGGAAGCTCCACTTTCCCCCGGGACCGGTGTGGTATTGCCGGGGGACCGGTCTTCCTGCGACTGGGGCTACGAATGCAGGGGTGCCTCTCCCTGCCCGGACCAAACCAGCGATGTTCCCTCATGGCCAGCAGACGAGAGGCAGCTGGACGAGCAGCTTCTTCTCTCGCCCTGCCTGTATTCCAGGGGGTTGGACGGGGACGAGGAGGGGAGCTGGATTTTAGAGGGCGAGGCTTGCACAGCACAGCCGCTTCTGGAGGAACTGCAGAAGGAAGGAGGCTGGCAGCTGTGCcaggcccctccttgcctggacGTGCCCATGTCCAGCCTGAGGCTGTGTCTGGACTCTGGAGGGGCAGGGCTGGATGTGGGGGCGGAACTACCGGGTCAATCCCAGAGGGACTCTTCGGGGGACCTATCCAGTGCACTGGAGAACGAGGTGTTCCCCATCGACCTTAGCCCCCCCTACCTCAGCGGGTACGAGCCCCGACCCGATTCTATCTCCTTCTCTACCCACTCTCCCTTACCCGCATTTGAACAGTTGGTGGCATATTTAAAGAGGTGATGAGAGGCACAGAATGTTAGCTCACATCTGTCCGAGTGAAGGACCTAGGAGACTGTGGAAGGAGGTATTTTCTGTTGTCAAGGTGGGATTTAGAGAGCACTGTATTTAGACtctaacccccttcccccctgcaAAAAAGGTGGTGTGTCTCACCTTAATCTCAGGTACTTGGATTCTGGATTCCTCACTTAGCTTTGAAGTCTTGGGTAAACATACTAGCTGCAGCGATGGGTCAAACCACATTACCCACGTTCCCACTGTTGAAAATGACTTTACTTGCTTTGTTGAGGCTTTCATCtatggaggaaataatgtgccaatattaattaattaaataaaatgtcaaaagtcaacataaataattaatgtaaaatattgatttatttatttccacatgtcCATTAAATGTGCAAGTatgaattaattacattaaaagtgaaatgtcaacataaataattaaatgtaaagtatttaattatttatttacatatttcattatttatatatttaatatatatttgattaattaatattgtcacCTTTCAtctgtggtgtgaaatgggaaataattaaatctggcaacatcatccatcaaagccagtggTTTGGTCTAACATTCAATTGGTGGTTGAACTCGCTGGATTTCTATGAGATTTTCATGCCATAGTAGGGGAAATATTGGTATTAGCAGACCTAATCGGAGCAAATGTTGCGACCACTGACTCAAGTAGAGGATTTCTATGGAAGTGACTGTAATGCCAATGTTGCAGAGGGtagattttttaataaatgaatcATTAAAAACCGAATTTAACTCGTCATTGTATGTCAGTCCATTGGCTCAGACAGTTCAAGGCAGAGGTTGCCTCTAAgcacattatttcctccataCTTATccagaaatgcttcacctgTTATGTATTTGTAGTTTACAGGTCTGGTTCAGTGTCTTCATCGAGGTCAAATAACAGTGTCATTGCATTACATaactttagcagacgctcttatctaaaGTGAATTACAAATCAAAAATGAAAGTGGTATCACATGTGGGATTTGTAATAAGATCTATATCCCAACATACTGCATACTATCCACAATGGCATTCGGAATCTGTGAAGGGTGATAATGTTTACAGGAACCTTTGTTCGATGAAGCCAATCTACAGTGCCTTCTGCCTTGTTGTGAGTCAGGGCCTATtgagtttcatttttttatgttttttaagtcATGCCATTTTCTGAAAGACATTGGACTGCATTCAGTTATCGAACGAAGGATGGATATTGTGCTATCCTCACTGAAAATGTAGTTATTTGTGCTCCGTGTTTGTGTGGGCACGCATGTGTTTGcacatacagtcaagccggaaagtctgcacacccctttcaccctctccacgtttcatt

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01108	Tissue_fac	Tissue factor	Family	Interproscan
PF01459	Porin_3	Eukaryotic porin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961	Domain	Fibronectin type III	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR023614	Homologous_superfamily	Porin domain superfamily	Interproscan
IPR027246	Family	Eukaryotic porin/Tom40	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR037930	Family	Tom40	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10802	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005741	Cellular Component	mitochondrial outer membrane	Interproscan
GO:0005742	Cellular Component	mitochondrial outer membrane translocase complex	Interproscan
GO:0008320	Molecular Function	protein transmembrane transporter activity	Interproscan
GO:0030150	Biological Process	protein import into mitochondrial matrix	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-