Gene detail

Detailed information of KAJ8386948.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8386948.1	DNAJ HOMOLOG SUBFAMILY C MEMBER 2	AAFF_1.1_unplaced_220	1494205	1503199	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00165450

CATAAATCTTGTCACGGAGGAATAATGCTGTAACGCAAGCCGAACCAGGCCCATGTGTTGCGCTGAAAAACCGGTCGATACAGTACCTGGCCGACAATTtggaaacattatttttaattgcgCATTTGAATGATTGCTCGTTAGAGTAATTGACATATCCAAGATGCTGAAGGAAGCGGTGGAAGGGCAAGTTACAGTTGTCTGTAACGCCATCGCAGCCTCAGTGCAGTTCCAAGTGGAGCCAGTGGGTCGATGGTTCGAGGCCTTCTTGAAACGCAGGGACAGGAATGTTTCTGCCTCCttccaggagctggaggaggaggaggagctgtcgGAGGAGTCCGAGGATGAGGAGCTGCAGCTTGAGGAGTACCCCATGCTCAAGACACTGGACCCTAAGGACTGGAAGAATCAAGATCACTATGCTGTCCTTGGACTGGTCCACATGAGATACAAAGCGACACAGAAACAAATCAAAGCAGCCCACAAAGCGATGGTATTGAAGCATCACCCAGACAAAAGGAAAGCGGCAGGGGAGCAGATTGTGGAAGGAGATAATGACTACTTCACATGCATCACTAAAGcaaTCGAAATTCTGTCAGACCCTGTGAAGCGAAGAGCCTTTGACAGTGTGGACCCAACCTTTGACAATGCTGTCCCCTCCAAGGGTGAAGGCAAAGAGAACTTTTTTGAGGTTTTTGTCCCCGTCTTTGAGAGGAATTCCAGATGGACGTCCAAGAAGCACATCCCTAAACTTGGAACAACGGGCTCCTCATTCGAAGAGGTGGATAATTTCTATTCTTTTTGGTATAACTTTGATTCTTGGAGAGAATTTTCATACTTGGAtgaagaagagaaagaaaaggctGAATGTCGAGACGAAAGAAGATGGATCGAGAAGCAGAACCGTGCCTCCCGCGCCCAGAGGAAGAAGGAGGAGATGAACAGAATACGGACGCTCGTTGACACTGCTTACAGCTGTGACCCCAGGATTAAGAAATTTAAGGACGACGAGAAAGCGAGGAAGGAGTCTGAGAAGAAAGCCAAAGTGGAGGCCAAGAGAAGAGAGCAGGAGGAGAAGGAGCGGGCCAGGCAGGCTGAGCTGGAGGCAGCGCGTCTGGCtaaagagaaggaggaggaggaggccaagCAGGCTGCGCAGCAGGccaagaaggagaaggagatcCAGAAGAAAGCCATCAAGAAGGAGCGGCAGAAACTCAGGACCACCTGCAAGAACTGGAACTACTTTGCTGACAACGAGGCTGAGAGTGTAAAAATGATGGAAGAAGTGGAAAAGCTCTGTGATCGTTTGGAACTGGTCAGCCTGCAGTCCTTGAATGAAGTGCTTGCTTCGGGTTCAAAGGAGGAAAGCAAAGTTGCTGTGGAGAAGCAGaTGCAGGAGGTGAATGCGCAGCtgcagagggagaaggaagcggAGGTGCAATCCCGGCAGGCCTCGCGCAGCTCAGAGCAGGCCAGCAGTGGCTCCGGGGGCGGGAGCAAGGGCTGGAATGAGGAGGAGCTGCAGCTGCTGATCAAGGCGGTCAACCTCTTCCCTGCAGGAACAAACTCCAGGTGGGAAGTTATTGCCAACTACATGAATTTGCACTCTACCAGCGGCATTAAAAGGAATGCCAAAGACATCATAAATAAAGCCAAGAATTTACAAAAGCTTGACCCTCACCAGAAAGACGAAATCAACAAGAAAGCTTTCGAGAAGTTCAAAAAGGAGCACGCGGCCGTGCCTCCCACCGTAGACAACGCAGTGCCTTCTGAGAGATTTGACGTGTCAGGTGCTGAGGCAAACGCGGCCTGGACCACGGAGGAGCAGAAGCTTCTGGAACAGGCACTGAAGACCTTCCCCGTCAGCACTCCGGAGAGATGGGAGAAGATCGCTTCCGTCGTTCCGGGACGCACCAAGAAAGACTGTATGAAGAGGTACAAGGAGCTTGTGGAAATGGTTAAGGCGAAGAAAGCAGCCCAGGAGCATGTCGCCCCTAAGAGTAAAAAATGACGCGTATGAACGAATCAACTTCTTTTAatgttattgtgttgtctttattttataataaaactGCAAAGGAAAAC

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00226	DnaJ	DnaJ domain	Domain	Interproscan
PF00249	Myb_DNA-binding	Myb-like DNA-binding domain	Domain	Interproscan
PF16717	RAC_head	Ribosome-associated complex head domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001005	Domain	SANT/Myb domain	Interproscan
IPR001623	Domain	DnaJ domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR017884	Domain	SANT domain	Interproscan
IPR017930	Domain	Myb domain	Interproscan
IPR032003	Domain	Ribosome-associated complex head domain	Interproscan
IPR036869	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR042569	Homologous_superfamily	Ribosome-associated complex head domain superfamily	Interproscan
IPR044634	Family	J-protein Zuotin/DnaJC2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43999	DNAJ HOMOLOG SUBFAMILY C MEMBER 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006450	Biological Process	regulation of translational fidelity	Interproscan
GO:0030544	Molecular Function	Hsp70 protein binding	Interproscan
GO:0043022	Molecular Function	ribosome binding	Interproscan
GO:0051083	Biological Process	'de novo' cotranslational protein folding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-