Detailed information of KAJ8383956.1 in Aldrovandia affinis Gene info
Gene IDAnnotationScaffoldStartEndStrand
KAJ8383956.1COLLAGEN ALPHAAAFF_1.1_unplaced_282805408831385-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF07448Spp-24Secreted phosphoprotein 24 (Spp-24) cystatin-like domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001190DomainSRCR domainInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR010892FamilySecreted phosphoprotein 24Interproscan
IPR017448DomainSRCR-like domainInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR046350Homologous_superfamilyCystatin superfamilyInterproscan
IPR050149FamilyCollagen superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24023COLLAGEN ALPHAInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0046849Biological Processbone remodelingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP