| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| KAJ8383464.1 | CADHERIN-23 | AAFF_1.1_unplaced_293 | 532039 | 603635 | - |
| CDS | |||||
| AAFF_T00220600 | |||||
| Transcript |
| AAFF_T00220600 |
| Protein |
| KAJ8383464.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00008 | EGF | EGF-like domain | Domain | Interproscan |
| PF00028 | Cadherin | Cadherin domain | Domain | Interproscan |
| PF02210 | Laminin_G_2 | Laminin G domain | Domain | Interproscan |
| PF07645 | EGF_CA | Calcium-binding EGF domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000152 | PTM | EGF-type aspartate/asparagine hydroxylation site | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR001791 | Domain | Laminin G domain | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR002126 | Domain | Cadherin-like | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR015919 | Homologous_superfamily | Cadherin-like superfamily | Interproscan |
| IPR018097 | Conserved_site | EGF-like calcium-binding, conserved site | Interproscan |
| IPR020894 | Conserved_site | Cadherin conserved site | Interproscan |
| IPR039808 | Family | Cadherin | Interproscan |
| IPR049883 | Domain | NOTCH1 EGF-like calcium-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24027 | CADHERIN-23 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0007155 | Biological Process | cell adhesion | Interproscan |
| GO:0007156 | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0016342 | Cellular Component | catenin complex | Interproscan |
| GO:0045296 | Molecular Function | cadherin binding | Interproscan |
| GO:0098609 | Biological Process | cell-cell adhesion | Interproscan |
| GO:0098742 | Biological Process | cell-cell adhesion via plasma-membrane adhesion molecules | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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