Gene detail

Detailed information of KAJ8378001.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8378001.1	GLUTAMATE DECARBOXYLASE-RELATED	AAFF_1.1_unplaced_334	363429	384724	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00249380

GTTTTATTGCGGCAAAACATTTCAGCCAGAAGACACCTGTCACATATACCTACTATTGTACCCTGTGTCGCGAGATGCTCTTAAACGTTACGCGTGGTTGCTCCCGAATCAATCGCTTCGCCATCTGACGTAGTTCTATGGGCATGGTTTGAATTCTGGAATAGACGCTGCGCTTTATGCCTCAGCTACCCGAGACCATTATTGCGCAATTGGATTTCTTCGACCTGCACAGACGCCAAGAGCACACCTATCAGCACCACCGAACTGAACAGCACCCGCTCCCTTGCTGTGTTTTGTGTCTAAATGGACACGTCTTGTCTACTTCTCTGAGAAGCGACACCTGCCAGTGACAATTTCCAATGGCATCAGGCGGATTTTGGTCcctggaaaatgaaaatggggGCGAGAACAGCAACCAAAACCAGAGCACACCAAGAGCTTGGTGTCAGGCTGCCCACAAATTTACCGGAGACCTTGGATCAAAATTATATGCTCTGCTTAACGTTGGAGAGGGCGAGAAAACGGCCAGCACAATCGCCCAAAAAGTCGGGGATCCAACAGAAAATTGCGACTGCAACAAACCGTGTAATTGTTCCAAGCGAAATCTTGATTTCTCCAATTTGTACTCAACAGATCTACTGCCTGCATTAGACGGCGATCTGGCAACAATAACTTTTCTGCAGGAAGTTGTGGACGTAATGCTGGCATATATTGTGAAATCATTTGATAGGTCGACGAAAGTAATTGATTTCCATTACCCAAATGAACTGCTTGAAACAAACAACTGGGACCTCTCGGACGAACCAGAAACGCTAGAAGACGTGCTAATAAATTGCCGAGCAGCACTGAAATACTCAATCAAAACAGGCCACCCCCGGTACTTCAATCAACTTTCTACAGGATTAGATATGGTTGGTTTAGCAGCAGAGTGGCTAACATCCACTGCTAATACCAATATGTTCACCTATGAGGTCGCGCCGGTGTTCGTGCTGCTGGAGTACATCACTCTGAGGAAGATGAGGGAGATTGTTGGCTGGCCAGATGGTCAGGGGGATGGATTATTCTCCCCAGGTGGCGCCATCTCTAATATGTACGCTATGCTGGTCGCCCGGTTCAAGATGTTCCCAGAGGTGAAGGAGAAGGGCATGTCCTCCGCTCCTCGATTGGCCGCCTTCACGTCGGAACATTGTCATTTTTCAATCAAGAAAGGAGCTGCAGCACTAGGGATCGGCACAGACAGCGTCATCTGCATCAAAGCTGACGAGAGAGGTAAAATGATGCCATCAGACCTTGAGAGGAGAATAGTTGAAGCCAAACAGAAGGGTCTGGTTCCATTTTTCGTTAGCGCCACCGCGGGCACGACTGTGTACGGTGCCTTCGACCCACTGAACGCCGTGGCTGACATCTGCAAGAGGCACAACATCTGGATGCATGTGGACGGAGCCTGGGGAGGAAGCCTCCTTATGTCACGGAAGCACCGCTGGAAACTAGACGGAGTTGAAAGGGCCAATTCAATGACGTGGAACCCTCATAAAATGATGTCTGTCCCACTGCAGTCCTCAGCCCTCCTTGTCAGAGAAGAGGGCTTAATGCAGAGCTGCAACCAGTTGCACGCCTGCTacctcttccagcaggacaagcACTATGACATGGCATACGACACCGGTGATAAGGCCCTGCAGTGTGGCCGCCACGTTGATATCTTTAAGCTGTGGCTCATGTGGAGGGCCAAGGGCACCTTTGGATTTGAAGCTCAGATtgacaagtgcctggaactctctGAGTACCTGTACAACAAAATCAAAGACAGGGAAGGGTACGAAATGGTGTTTGATGGAGAGCCCCAGCATACAAATGTGTGCTTCTGGTACCTTCCACCGGGGGTTCGCTACTTGGAGgacaaggaggagaggaggcgaCGGCTGCACAAGGTGGCCCCTGTCATCAAGGCCAGGATGATGGAGCATGGAACCACCATGGTCAGCTACCAGCCGCAGGGGAACAAGGTAAACTTCTTCCGCATGGTCATCTCCAACCCCGCGGCCACTTACGAGGACATCGACTTCCTCGTCGAGGAGATTGAACGTCTTGGACAGGACCTGTAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00282	Pyridoxal_deC	Pyridoxal-dependent decarboxylase conserved domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002129	Family	Pyridoxal phosphate-dependent decarboxylase	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45677	GLUTAMATE DECARBOXYLASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004351	Molecular Function	glutamate decarboxylase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006540	Biological Process	gamma-aminobutyrate shunt	Interproscan
GO:0009449	Biological Process	gamma-aminobutyric acid biosynthetic process	Interproscan
GO:0016830	Molecular Function	carbon-carbon lyase activity	Interproscan
GO:0016831	Molecular Function	carboxy-lyase activity	Interproscan
GO:0019752	Biological Process	carboxylic acid metabolic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-