Detailed information of KAJ8373282.1 in Aldrovandia affinis Gene info
Gene IDAnnotationScaffoldStartEndStrand
KAJ8373282.1NUCLEAR HORMONE RECEPTORAAFF_1.1_unplaced_367500341574151+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyESR-like
Transcription Factors FamilyNGFIB-like
Transcription Factors FamilyRXR-like
Transcription Factors FamilySF-like
Transcription Factors FamilyTHR-like
Transcription Factors FamilyGCNF-like

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00104Hormone_recepLigand-binding domain of nuclear hormone receptorDomainInterproscan
PF00105zf-C4Zinc finger, C4 type (two domains)DomainInterproscan
PF00687Ribosomal_L1Ribosomal protein L1p/L10e familyDomainInterproscan
PF11510FA_FANCEFanconi Anaemia group E protein FANCERepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000536DomainNuclear hormone receptor, ligand-binding domainInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR001628DomainZinc finger, nuclear hormone receptor-typeInterproscan
IPR001723FamilyNuclear hormone receptorInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003074FamilyPeroxisome proliferator-activated receptorInterproscan
IPR003075FamilyPeroxisome proliferator-activated receptor, betaInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR013088Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan
IPR016095Homologous_superfamilyLarge ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR021025DomainFanconi Anaemia group E protein, C-terminalInterproscan
IPR023673Conserved_siteLarge ribosomal subunit protein uL1, conserved siteInterproscan
IPR023674Homologous_superfamilyRibosomal protein uL1-likeInterproscan
IPR028364FamilyRibosomal protein uL1/ribosomal biogenesis proteinInterproscan
IPR035500Homologous_superfamilyNuclear hormone receptor-like domain superfamilyInterproscan
IPR050234FamilyNuclear hormone receptor family NR1 subfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24082NUCLEAR HORMONE RECEPTORInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0001227Molecular FunctionDNA-binding transcription repressor activity, RNA polymerase II-specificInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0004879Molecular Functionnuclear receptor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006631Biological Processfatty acid metabolic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0009755Biological Processhormone-mediated signaling pathwayInterproscan
GO:0010887Biological Processnegative regulation of cholesterol storageInterproscan
GO:0019216Biological Processregulation of lipid metabolic processInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0045923Biological Processpositive regulation of fatty acid metabolic processInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0050728Biological Processnegative regulation of inflammatory responseInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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