Gene detail

Detailed information of KAJ8366958.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8366958.1	AMINO ACID TRANSPORTER	AAFF_1.1_unplaced_522	31702	66950	+

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00336270

ATGGCGGACGCAATCGTGGTCTCCGAGTCGAAAGCGACTGATAACGAGGATTTGCAGACTCTGAAGGAACTCGTGGACCAGCTCTATCATTTCAGGGACCACTATTTTGAGACTCACAGTGTGGAGGATGCTGACCGGAAGAACAGCGACGTCAGACAGGAAATGGAAAAGATTCTGAAGAGACTGGAAGAAACGGAAGAGAGGCGCAGGCACAGTGCGGACTTCCTGCTGCTCCGGGGCCGGTGTCTGAGTGTGGCCCCGGAGTTCAGCGCGCTGGCGGAGGACTGCCTGTCCCGGGCGGTCAAGCTGGAGCCGGCGCTGGTGCAGGGCTGGAACGCCCTCGGCGAGCAGTACTGGAAGAAGGGCGACCTCACCGGGGCCAACACCTGCTTCACCGGCGCCCTGCAGCAGtgtaagAATAAGGTGTCCCTGCGCAGTCTCTCCATGGTGTTGAGGCAGCTGCCAGGGGGGGCGCTGCAGAGCGCAGccagagggtgctggagagtgTGGATATGGCCCGGCAAGCAGTGCAGCTGGACGTCACAGACGGGACATCCTGGTGTGAGTGAGGTGGGGGGTCTGGGGCAGTTGAACGGGGTGGGGGGATCTGGGGCAGTTGAACAGGGTGGGGGGTCTGGGGCAGTTGAACGGGACATTCTGGGGAACGCCTACATCTCTCTCTTCTTTACCAGCGGACAAAACCCCCAGCAAGCACAGCAAGCAATGAGCGCTTATTCACAGGCTgagAAAGTGGACAGAACCAGCTCCTCCAACCCTGACCTGCACTTCAACAGAGCCACGctctttCAGTATGAGGAGATGTACGGCTCGGCGCTGGCAGGGTACAGCCAGGCTGCCGCTCTGGACCCCACGTGGGAGGAGCCtccggagagggagaggcagctgCTGGAGTACCTGGAGCGGCTGAGCACCCTCATCCAGACCAAGggtaaGGTGAAGGCCCGCAGGTTGAGGTCGATGCTGGGCTCTCTCAGTGTGTCTGCGCTGGGCCCCTGCTCGTCCCCTCAGTTCTGCTCTCCCACAGGCCGCACGGGAAGCCTGGAGCCACGGTGTCTGTCCGCCTTGGTGCACGGCCACAACCCCAGGGCAGCCGCACTGGGCAAGGTGCTGTTCAGCCTGGCCCCTGAGGGCCGCATGGccttcaCGTTCGGGATGGTGGACAGTGAGGAGACCTGCTGTGTCGTCATGGTGTACAACACAGCGGACAGCTGGGGCGTGCTGATCGGAGACTCTGTGGTCATTCCTGAACCCCAGGTCAAACGCCACAGCGTCACTCacaaagagcagTCGTTTGATTTCCGCAACAAGCAGCACGCAGCCAGACCCCCGCCTCCgaagaggaggggcagtggggcaggaagagggggcagtggggcaggaagaggaggggcagCACACTGGGACCAAtgtgttgaggtgtctcagtgtgttgaggtgtctcagtgtgttgagTGTGTTGAGGTGTCTCAGTGTGTTGAGGTGTGTCAGTGCTTCTTGGGAAAGGGGCGGGCCTTGTCCCTCAGTGGGGAGCTGAAGTGGAAGAAGCCTTTAGAGGCGTCAGGGTCCAGAGAGGAGAAGAGCCTGTCTCCGGGCGAGCTCGGTGCGAACGATGTCCAGCTTCCCGGCAGAGCGGAGGAGCAGGCGGGGCACACGGCGGGGGAGCGGCAGAACTGCCCCGAGCCGTGCGGGTCACAGAACGCGTGCGAGCAAGCAGTGACCCACGCAAACCCGCTCAGCACCGCCcggcacttcgggaagttacaCAGCAGCAGGACAAAACGAGAGGCGACAAGAATACAACCTGACGTCAACCCAGCGGTCACGCAGGAAAAAGCAAGCTCACTCACGATGGCGTCCTACAGCCCCGCCCCAACGCAGGAGGCGGCGCCCGAGGGGACCAATGGCTGTGGGCCTCTGAAGAAGGGCGGGTCGGAGGAGTCGatgaagctgaagaaggagatCTCGCTGGTGAACGGCGTGTGTCTGATCGTGGGGAACATGATCGGATCAGGCATCTTCGTGTCCCCGAAGGGTGTGCTGATGTACAGCGGCTCCTATGGGCTGTCGCTGGTGGTGTGGGCCATCGGGGGCGTGTTCTCCGTGTTCGGCGCGCTGTGCTACGCCGAGTTAGGCACCACCATCACCAAATCGGGCGCCAGCTACGCCTACATCCTGGAGGCCTTCGGCGGGTTCCTGGCCTTCATCCGGCTGTGGACCTCCCTCCTCATCATTGAGCCCACCAGCCAGGCCGTCATCGCCATCACCTTCTCCAACTACATGGTGCAGCCCGTCTTCCCCACCTGCGTCGCTCCGTACCTGGCCAACCGCCTGCTGGCCGCAGCCTGCATCTGTTTGCTCACCTTTGTGAACTGCGCGTATGTGAAGTGGGGAACTCGGGTTCAAGACTTCTTCACCTACGCCAAGGTCATCGCCCTGATCGCAGTCATCATCACCGGCCTGGTCAAGCTCTCCCAGggtcAGACGCAGAATTTCGAGCGCATGTTTGAGGGCTCATCGCAGGACCCCGGGGATGTGGCTCTGGCCCTGTACTCCGCCCTCTTCTCATACTCCGGCTGGGACACCCTCAACTTCGTCACCGAGGAGATCAAAAACCCAGAGAGGAACCTACCACTAGCTATTGCCATCTCCATGCCCATTGTGACTGTGATCTACATCCTTACCAACGTCGCCTACTACACTGTGCTGGATATCCCTGCCATCCTGGACAGTGACGCTGTGGCTGTGACCTTTGCTGACCAGGTGTTCGGGGTGTTTAACTGGACCATCCCAGTGGCTGTTGCCCTCTCCTGTTTCGGAGGACTCAATGCGTCCATTCTGGCTGCTTCCAGgctgttcTTCGTGGGCTCCAGAGAGGGTCATCTCCCCGACTATCTGTGCATGATCCACGTCCAACGCTTCACCCCCATCCCTGCGCTGCTCTTCAACGGTGCGATGGCTCtggtgtacctgtgtgtggaggACATCTTTAAGCTGATTAATTACTACAGCTTCAGTTACTGGTTCTTTGTGGGTCTGTCCATCCTGGGGCAGCTGTACCTCCGCTGGAAAGAGCCGGACAGGACCCGACCTCTGAAGCTCAGCCTCTTCTTCCCGGTGGTGTTCTGCCTGTGCACAGTGTTCCTGGTGGTCGTTCCTCTCTACAGCGACACGGTCAACTCCTTCATTGGCATCGGCATCGCCCTATCAGGAATCCCCGTCTACTTCCTGTGCTGCTACATGCCCGCCCATCGGAGGCCACTTTGGGTCCGCAGGGCTATTGCCTCCACTGGCCGACTGATCCAGAAGGTTTGCTACTCTGTTCTGACGGAGATGGACATCGacgacaaaaaaacacaataa

Transcript

AAFF_T00336270

CTCCGTGAGACagggtcatggctagatagtaatcctattttttcccatttttcgcATTTGTCGCTAAAGTATTAAATTTCACAGACGAGCTGGTAACcataactctaaccctaacccgaAGCTGAAACGAGGGTTCGGCGCTTgccgtcgttactatggggactcagtcaaacctcgcgagagttggGCAAAATAGGGCTACTACCTATCCATCGGCGTGAGAGAGGAGGGTCACCTGGCCAGTGAAGATGGCGGACGCAATCGTGGTCTCCGAGTCGAAAGCGACTGATAACGAGGATTTGCAGACTCTGAAGGAACTCGTGGACCAGCTCTATCATTTCAGGGACCACTATTTTGAGACTCACAGTGTGGAGGATGCTGACCGGAAGAACAGCGACGTCAGACAGGAAATGGAAAAGATTCTGAAGAGACTGGAAGAAACGGAAGAGAGGCGCAGGCACAGTGCGGACTTCCTGCTGCTCCGGGGCCGGTGTCTGAGTGTGGCCCCGGAGTTCAGCGCGCTGGCGGAGGACTGCCTGTCCCGGGCGGTCAAGCTGGAGCCGGCGCTGGTGCAGGGCTGGAACGCCCTCGGCGAGCAGTACTGGAAGAAGGGCGACCTCACCGGGGCCAACACCTGCTTCACCGGCGCCCTGCAGCAGtgtaagAATAAGGTGTCCCTGCGCAGTCTCTCCATGGTGTTGAGGCAGCTGCCAGGGGGGGCGCTGCAGAGCGCAGccagagggtgctggagagtgTGGATATGGCCCGGCAAGCAGTGCAGCTGGACGTCACAGACGGGACATCCTGGTGTGAGTGAGGTGGGGGGTCTGGGGCAGTTGAACGGGGTGGGGGGATCTGGGGCAGTTGAACAGGGTGGGGGGTCTGGGGCAGTTGAACGGGACATTCTGGGGAACGCCTACATCTCTCTCTTCTTTACCAGCGGACAAAACCCCCAGCAAGCACAGCAAGCAATGAGCGCTTATTCACAGGCTgagAAAGTGGACAGAACCAGCTCCTCCAACCCTGACCTGCACTTCAACAGAGCCACGctctttCAGTATGAGGAGATGTACGGCTCGGCGCTGGCAGGGTACAGCCAGGCTGCCGCTCTGGACCCCACGTGGGAGGAGCCtccggagagggagaggcagctgCTGGAGTACCTGGAGCGGCTGAGCACCCTCATCCAGACCAAGggtaaGGTGAAGGCCCGCAGGTTGAGGTCGATGCTGGGCTCTCTCAGTGTGTCTGCGCTGGGCCCCTGCTCGTCCCCTCAGTTCTGCTCTCCCACAGGCCGCACGGGAAGCCTGGAGCCACGGTGTCTGTCCGCCTTGGTGCACGGCCACAACCCCAGGGCAGCCGCACTGGGCAAGGTGCTGTTCAGCCTGGCCCCTGAGGGCCGCATGGccttcaCGTTCGGGATGGTGGACAGTGAGGAGACCTGCTGTGTCGTCATGGTGTACAACACAGCGGACAGCTGGGGCGTGCTGATCGGAGACTCTGTGGTCATTCCTGAACCCCAGGTCAAACGCCACAGCGTCACTCacaaagagcagTCGTTTGATTTCCGCAACAAGCAGCACGCAGCCAGACCCCCGCCTCCgaagaggaggggcagtggggcaggaagagggggcagtggggcaggaagaggaggggcagCACACTGGGACCAAtgtgttgaggtgtctcagtgtgttgaggtgtctcagtgtgttgagTGTGTTGAGGTGTCTCAGTGTGTTGAGGTGTGTCAGTGCTTCTTGGGAAAGGGGCGGGCCTTGTCCCTCAGTGGGGAGCTGAAGTGGAAGAAGCCTTTAGAGGCGTCAGGGTCCAGAGAGGAGAAGAGCCTGTCTCCGGGCGAGCTCGGTGCGAACGATGTCCAGCTTCCCGGCAGAGCGGAGGAGCAGGCGGGGCACACGGCGGGGGAGCGGCAGAACTGCCCCGAGCCGTGCGGGTCACAGAACGCGTGCGAGCAAGCAGTGACCCACGCAAACCCGCTCAGCACCGCCcggcacttcgggaagttacaCAGCAGCAGGACAAAACGAGAGGCGACAAGAATACAACCTGACGTCAACCCAGCGGTCACGCAGGAAAAAGCAAGCTCACTCACGATGGCGTCCTACAGCCCCGCCCCAACGCAGGAGGCGGCGCCCGAGGGGACCAATGGCTGTGGGCCTCTGAAGAAGGGCGGGTCGGAGGAGTCGatgaagctgaagaaggagatCTCGCTGGTGAACGGCGTGTGTCTGATCGTGGGGAACATGATCGGATCAGGCATCTTCGTGTCCCCGAAGGGTGTGCTGATGTACAGCGGCTCCTATGGGCTGTCGCTGGTGGTGTGGGCCATCGGGGGCGTGTTCTCCGTGTTCGGCGCGCTGTGCTACGCCGAGTTAGGCACCACCATCACCAAATCGGGCGCCAGCTACGCCTACATCCTGGAGGCCTTCGGCGGGTTCCTGGCCTTCATCCGGCTGTGGACCTCCCTCCTCATCATTGAGCCCACCAGCCAGGCCGTCATCGCCATCACCTTCTCCAACTACATGGTGCAGCCCGTCTTCCCCACCTGCGTCGCTCCGTACCTGGCCAACCGCCTGCTGGCCGCAGCCTGCATCTGTTTGCTCACCTTTGTGAACTGCGCGTATGTGAAGTGGGGAACTCGGGTTCAAGACTTCTTCACCTACGCCAAGGTCATCGCCCTGATCGCAGTCATCATCACCGGCCTGGTCAAGCTCTCCCAGggtcAGACGCAGAATTTCGAGCGCATGTTTGAGGGCTCATCGCAGGACCCCGGGGATGTGGCTCTGGCCCTGTACTCCGCCCTCTTCTCATACTCCGGCTGGGACACCCTCAACTTCGTCACCGAGGAGATCAAAAACCCAGAGAGGAACCTACCACTAGCTATTGCCATCTCCATGCCCATTGTGACTGTGATCTACATCCTTACCAACGTCGCCTACTACACTGTGCTGGATATCCCTGCCATCCTGGACAGTGACGCTGTGGCTGTGACCTTTGCTGACCAGGTGTTCGGGGTGTTTAACTGGACCATCCCAGTGGCTGTTGCCCTCTCCTGTTTCGGAGGACTCAATGCGTCCATTCTGGCTGCTTCCAGgctgttcTTCGTGGGCTCCAGAGAGGGTCATCTCCCCGACTATCTGTGCATGATCCACGTCCAACGCTTCACCCCCATCCCTGCGCTGCTCTTCAACGGTGCGATGGCTCtggtgtacctgtgtgtggaggACATCTTTAAGCTGATTAATTACTACAGCTTCAGTTACTGGTTCTTTGTGGGTCTGTCCATCCTGGGGCAGCTGTACCTCCGCTGGAAAGAGCCGGACAGGACCCGACCTCTGAAGCTCAGCCTCTTCTTCCCGGTGGTGTTCTGCCTGTGCACAGTGTTCCTGGTGGTCGTTCCTCTCTACAGCGACACGGTCAACTCCTTCATTGGCATCGGCATCGCCCTATCAGGAATCCCCGTCTACTTCCTGTGCTGCTACATGCCCGCCCATCGGAGGCCACTTTGGGTCCGCAGGGCTATTGCCTCCACTGGCCGACTGATCCAGAAGGTTTGCTACTCTGTTCTGACGGAGATGGACATCGacgacaaaaaaacacaataaagaccTCAAATGAACGTACCCACTAATGTCTGACGCACAAACCACAAACCAACTCGCCCAACCGCGCCCGCACCAAGACCGAGACAGCGGCCAGCCAACCAGGAGGGGCACCTGTTGCGGTAGCAGCAGAAACGCACAGCTGGAACTGCACTCTGGAATGCGGTGAAGTCACAGGCCCTCTGACTGCAGCCGCTTCACCCcaactgatcccagaacagtcCTCACCACCCCACACTGCCCAGTGTGGCCCAGGTTGTAGGTATTCATAAATGTGTTGCAGTTATGAACTCGTAGACATAGGGAGTTCATACAGCTTCACTTCTGACATGAACGTATTGTaatagtgtgggtgtgtgtttgtgtgtgactagAGTAtgttagtgagagtgtgtgtgtgtgtgtgtgtgtgtagtgtgtagtgtgagtgtgtgtgtgtagtgtgtgtgtgagtgtagtgtatgtagtgtgtgtgtgtgtgtgtgtgtgagtgtagtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgagtgagt

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13520	AA_permease_2	Amino acid permease	Family	Interproscan
PF16669	TTC5_OB	Tetratricopeptide repeat protein 5 OB fold domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002293	Family	Amino acid/polyamine transporter I	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR032076	Domain	Tetratricopeptide repeat protein 5, OB fold domain	Interproscan
IPR038645	Homologous_superfamily	TTC5, OB fold domain superfamily	Interproscan
IPR050598	Family	Cellular Amino Acid Transporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11785	AMINO ACID TRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000821	Biological Process	regulation of arginine metabolic process	Interproscan
GO:0003333	Biological Process	amino acid transmembrane transport	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0015174	Molecular Function	basic amino acid transmembrane transporter activity	Interproscan
GO:0015179	Molecular Function	L-amino acid transmembrane transporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-