Detailed information of KAJ8366309.1 in Aldrovandia affinis Gene info
Gene IDAnnotationScaffoldStartEndStrand
KAJ8366309.1E1A-BINDING PROTEIN P400-RELATEDAAFF_1.1_unplaced_61244009118840+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF01416PseudoU_synth_1tRNA pseudouridine synthaseDomainInterproscan
PF07529HSAHSA domainFamilyInterproscan
PF12063ATG1-like_MIT1Atg1-like, MIT domain 1DomainInterproscan
PF15790EP400_NE1A-binding protein p400, N-terminalFamilyInterproscan
PF21127ATG1-like_MIT2ATG1-like, MIT domain 2DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000330DomainSNF2, N-terminalInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR001406FamilyPseudouridine synthase I, TruAInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR014012DomainHelicase/SANT-associated domainInterproscan
IPR020094Homologous_superfamilyPseudouridine synthase TruA/RsuA/RluB/E/F, N-terminalInterproscan
IPR020095Homologous_superfamilyPseudouridine synthase I, TruA, C-terminalInterproscan
IPR020097DomainPseudouridine synthase I, TruA, alpha/beta domainInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR022708DomainSerine/threonine-protein kinase Atg1-like, tMIT domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR031575DomainE1A-binding protein p400, N-terminalInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR041708FamilyPseudouridine synthase PUS1/ PUS2-likeInterproscan
IPR048941DomainATG1-like, MIT domain 2Interproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46459E1A-BINDING PROTEIN P400-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000812Cellular ComponentSwr1 complexInterproscan
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0031119Biological ProcesstRNA pseudouridine synthesisInterproscan
GO:0035267Cellular ComponentNuA4 histone acetyltransferase complexInterproscan
GO:0043967Biological Processobsolete histone H4 acetylationInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP