Gene detail

Detailed information of KAG7283873.1 in Coryphaenoides rupestris Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAG7283873.1	ZINC FINGER PROTEIN	PIJE02000001.1	1482154	1508872	+

Gene Structure

More details in Jbrowse Sequence

CDS

KAG7283873.1

ATGGGGTCCTCTGCGGTAGCGTTGCTAGTTTTGGGGATGTGCACAATGGAGACATGGGGCCTTCCTGTCAGGTCTGTGTTCGTCACCTTTCCCGGAGATGTCGTCAAAAACATGACTGACATAGAGATGGCAGATAAATACTTGAAGCGGTTTGGCTACGTAAACAGTCTGCAACGCAGTGGCTTCGAATCCTTGCTGTCCACCACCAGGGCTCTGAAGAAGCTGCAGAGCCAGATGGGCCTGGAGGAGACTGGACAGTTGGATGAGGCCACGCTGAACACCATGAAACGCCCCCGCTGTGGTGTCCCAGACGTACGCGGCTACAACACATTCGACGGAGACCTCAAATGGGACCACCACGACGTCACATACAGGATCCTGAACTACTCCCCTGACATAGCCGCCTCCCTGACCGACGACGCCTTCGCCAGGGCCTTCAAGGTGTGGAGTGACGTGACGCCGCTCACCTTCACCCATCACGGAGACGGGTATCCATTTGACGGCGCGGACGGCTTCCTGGCCCACGCCTTCCCACCTGGCGAAGGGGTCCAGGGTGACGCCCACTTTGACGACGACGAGTTCTGGACCCTCGGCCAAGGAGCAGTTGTGAAGACTGTGTACGGGAACGCAGAGGGAGCCGTGTGCCACTTCCCGTTCACCTTCCTGGGCAAGACGTACAGCAGCTGTACCACGGACGGACGCTCCGACAACCTGCCCTGGTGTTCCACTACTGCCGACTTCGGGAGGGACACGAAATTTGGCTTCTGCCCCAGTGAACGCAACAGCGACAACAGCCCGTGCGTGTTTCCCTTCGTATTTCTCGGCGAGACGTACGACAGCTGCACCACGGAGGGCCGCAGCGACGGCAACCGCTGGTGCGCCACCACGGCCAACTTTGACGAGGACCAGAAATATGGATTCTGCCCGAGACGCGACACGGGTGTGGTCGGGGGTAATTCGCCGGACGAGCCCTGTCACTTCCCCTTCCAGTTCCAGGGGAAGATGTACGACTCTTGCACTGCCGAGGGCCGTAGTGACAACAAGCTCTGGTGTGCCACCACCAATAACTTCGACACAGACACCAAATGGGGATTCTGTCCTGACAAAGGATCTAAAGCCGGCCCAGACCCCTCCCCCCCGGGCCCCACAGATCCCACCGAGCCTGACACACCCACCACCCCTAGCACCACCACAGCAGCTGTAGAGCCCACTATTGATGTCTGTCAGGTGAAAACATTTGACGCAATCACAGAGATTGGGAAAGAGCTGCATTTCTTCAAGGATGGATATTACTGGAAGATGTCTAGCAGCGATAAGGCAGGAGTCAAGGGTCCATTTGCTATGTCTGAGAGGTGGCCGGCCCTGCCCACTACTATTGATACTGCCTTTGAGGACTTGCTGACCAAAAAGATCGTGGAGAAGCTGGGCCTGCCGAGCAGCGTTCAGAAGGTGGATGGGTCCCTGCAGAGAGTCAAAGGCAAAGTCCTGCTCTTCAGTGGGGAGAACTTCTGGAGGCTTGATGTAAAGGCACTCAAGATGGACAGAGGCTATCCTCGACTCTCTGACACAACCTTCGGTGGCGTTCCCGGACACGTCCACGATATATTCCAACACAAAGGTCATATGTACTTCTGCCACGACCGCTACTACTGGCGTATGAATTCTCGCCGCCAGGTGGACCGCGTTGGCTACGTCAAATATGATCTCCTCAAATTGATGGATTTGGAGGAGAATGAGGTGGAGAGCAGTAGTGATGCGGGCCCATCTGGGTTGGAGGAGCCCTCAGAGAGCGGCATGGGGATGGAGTCATCGGAGGCCATGTCTGCGGACAGCAGCGATGCAGCTGCTCCACATGCACAGATCCCAGAGTCTGACTGCCATGTGGGACAAAGCTCAGAGGGTCTTGTGACTAGCTCCAGCACAGATGCCCGGGTGTCTTCGGTGCACCTCCCGGACTCCTCCTCGGTGGCCCAGTCCACCAGTGTGTCCAGCGTCTCCACAGTGACCCAGTCGGTGCTGGTGTCCGGGTCGGCCCAGGTGCTGGTGCACTCCAGTGTCGTGTCGGACGGAGCCATGATGGTGTCCGACTCGACCGCTTCCACCTCCTCGGACCTGGGCTCTGCCATAGACAAGATCATAGAGTCTACCATCGGACCTGACATTATGAACGGATGTATAGCTGTTACAAGCGCAGAAGATGGGGGAGCAGAGACCACCCAGTATCTGATACTGCAAGGGCCTGATGATGGTGCTCCTATGGTAGCCCAGATGTCCTCGGCTCTGTCCAGCAGGATAGCCACAGAGGCTTCCGGAGAGGGCCCCACCTCGACCTGCGTGGACCAGGGAGACCTGCAGGGCAACCTGGAGCCCGACGACCAGCCGGGATACTCGGGCTACCTGGAGGAGGGCGGCGACCAGCAGCCCGACCAGCCCCAGCACTCCCACCCCTCCCAGTACATGGACTGTGGCGTGGACGGCCCCGACCAGACGGGCGAGTCCTCCTCCTCCATTTATGCCGAGTGCTCCGGGGATGAGCCCGACCAGACACGCTCCCGCTCCGGCTTCCCCGACTACAGCGGGGACAACCGCCGCGAGCGTGACCTGCCTGGCTACGTGGAGTGCAGCGGGGCCGACTCCAACCCTAGCAGCCACGGCCACTACGTGGTCGAGTGCAGCGCCGGGTACCTGGAGTGTGGCGGTGAGGCGGAGGTGGAGCGGCCGCACCACTCGCGCAACTACATCGACAGCAGCGCCGACCACGGTGCACAGACGGGCCGTCAGTACGCCGCCGAGTACCGAGGGGACTGCGTGGCAGCGGCCGACTCGGAGCAGCCGGGCTACTCTCACTGCAATAACCACGACGATGACGATGAAGATGATGACGATGACTATTGTGACTATAGCGTTCAAACCCACAATCTGGAACGACCACAGCACTCCCATCAGCAGCAGCATCCTCTGAACTCCCACTGCTACGTGGAGAACAGCCGAGAGGGCTACGCGGACGAAGGCTCCTCCTCCTCTGACCACCACCCCATGGCAGACACGGTTGGATCGGGGGGGCTCCCCGAGGCCCTGGAGAGCAGCGAGAGCCAGCCGGGGCCCTTCATCAGCAGTAGTGGCACCTACGTCGCCCACCCTGAGCCGGAGGCGGTGCCGACGCAGTGCTCCCCCTGCCACAAAGAGCCCCAAGGCTCCCAGGGGCTTGAGGTTACGCCCGGACCGCCAGGGGACTCGCCCACATTGGCAGAGGTGGCGGAGGGCAGCGGGGAGCGACAGCCCAACCTGGCGGAGCTGGAGGAGATGATGGAGGTGGTGATCGTGCAGCAGTTCAAGTGCAAGATGTGTCCATACAAGAGCACGTCCAAACACACCCTCATCAACCACATGCGGGATAAGCACTTCAGAAGCGCAGGGGGCGCTCAGAAGAAGCGTGGGCGCGGGCGGCCTCCTAAAAGCGAGACCCTGGCCCGGCGGCAGGCGGAGCAGAAGGCAGCGGAGGAGAGACGGGCGGCGAGCGCGAAGCCAGAGGAGCAGCAGCAGGCCGAGGAAGAGTACGACGAGATCGTAGACGCCGGGGCCATCGACGATCCAGCAGTGGACAGTGACTATAACCCCGCGGACGAGGAGAACCGTGGCAGGCCGCCGCCCACTACCGCCAAGCCCCCTCCTCTTCCTCCCATCTCCTCCTCCTCCTCCTCCTCCTCGTCTTCCTCACAAAGACGTCCTCGCCGCAAGGTGGGCCGCCCCAGGAAATACAGGCTGGCGGAGGAAGGCTACGGCAGTAAAGAAGCAGAGGACCACGCTGCCAAGAAGGCCAGGCTGGACACTGAGGCTGCAGGCCCAGACGAGGCCACGTCTTCCGGGTTGGGCAGCGTGCCCACCACCAACGGATCTCCGGACCCAGCCGAGCCCTCGGTCAGCCAGTCGGACTCGGAGAACAAAGACCCGTCATCCAACGGCGGGCAGGAAGATGAATTCCCCAAGAAGAGAGGCCGGCCCTCCAAGAGGTTTCTCCGGAAGAAATACAGAAGATACATGAATCGCAAGCCCCACAACTGCTGGATCTGTGGCTCACGCTTCCTGTCCCAGGAGGACCTGCGCTTTCACGTGGACTCCCATGAGGGCAACGACCCTGAGCTCTTCAAGTGTCTGCAGTGCAACTACCACTGCAAGCGCTGGTCCTCACTCAAGGAGCACATGTTCAACCACGAGGGCAAGAAGCCGTTCAAGTGTGATGAGTGTGACTACAGCAGTGTGTATAAGAAGGACGTTCTGCGCCACTCCGCCGTGCACAACAAAGACAAGCAACTGCCAAAAGTCTCCCAGTTCCCCTGCCCCATCTGTCACAAGGTGTACCCCATGCAGAAGAGACTCACCCAGCACATGAAGACCCACAGCACTGAGAAACCCCACATGTGTGACAAGTGTGGCAAATCGTTCAAGAAGCGGTACACGTTTAAAATGCACCTGCTAACCCACATCCAGAGTCTGGGAGACAGCAAGTTTAAGTGTGAGTACTGCGACTACACGTGTGATAACAAGAAGATGCTGCTCAATCACCAGCTCTCCCACACCAACGACAAACCCTTCAAGTGCGACTACTGTCAGTACTCCACCTCCAAGGAGGAGTTCCTGGTGTCCCACCTGGCCATCAAGCACACCGGTGAGAAGCCGTTCTCCTGCGGCCTGTGTCACTTCACCACCAAGCACAGGAAGAACCTGCGGCTGCACGTGCAGTGTCGCCACCCTGAGGCCTTCGAAGAGTGGAGCGCCACGCACCCTGAGGAGCCGGTGCGCCGCCGCCGGCGGCCCTTCTTCACCCTGCAGCAGATCGAGGAGCTGAAGCAGCAGCAGGACGACGTGGCGCTAGATCCTGCCACGCTACTGCCCATCCAGGGCTTAGGGAAGGCCTCCGTCTCCCAAGATGCACATGGAAACACCACCATCATCTATGAACCAGCTGGACCCAGCGACCTGTCAGCCCAGAACGCACTGGACCTGCTGTTGAACATGAGCAACGCCCGGGAGCTCGTGGGCAACTCTTTGCAGGTACCAACGGACCTCCACAGAACAAACAAACCGTCCCAACCGAACACCATGTCCACCTCACCTGCTCTGACGGGTTCTGTCCACCAGGTGGCGGTGCTGAAGTCCGACAGCCAGGCTCCCGGAGGCGCTACCCAAAAGGTTGTGACCTTCCACGTGTCTGAGAGTGGCGAGGCAGTGGTGCAGGAGGCCTACGAGGAGGCAGGCGCCATGGAAACGGCAGAGCTGACGCAGATCGCGGTTGAGGCCTACGAGGGCGGAGGGGACTTCAGTGTGGTGGAGCAGGCCGCAGAGCAGGTCGCCGAGCATGTTCACAGCCCTGACACCGGATACAGCAACGAAGAGGGCAGCCCCTCCCCCGTGGTGGACGTCAGCGAATCCGAGAGCCTGAAAAGTGAAAAGTACTACCTCACCTCATCGCTGGCTGATGGTGTGCTACAGCAGGTAGAGTTGAGCAGCGAGGCCCCGCCCTCCCCTTCCGCAGTGGGCAGCCCCGGTCACAACACCAAGCGCTTCTCCTGCCGGGTCTGCATGGAGACCTTCGCAGGCCGCTCAGACATGGAGAACCACAAGAGGGCGCACATGGACCCCAGCACTTTCAAGTGTTCTGACTGCAACTTCACCGCCTCCTCCTGGCACAACGTCAAAGAACACATGACGCTGCACTCGTACCTGCGACCTCACAAGTTCAACCGTAACGGCCATCTCAAGTTCCACATGGAGCGATTGCACAACCAGGAGACGGCGCGCAAGAGCCGGGCGCCGATGGCCCAGCAGCAGACCATCATCGTCAACAACGAGGAGGTGGCACTGGCCACACTGCAGTCCCTGCAGGGCCAGACGGTGCTCACTCAGGAGAGGCTCCAAGCCCTGGGGCAGGAGCACGTCATCGTGACCCAGGAGCCGACCCTGTCCAACCAGGAGGAGGGTCAGTACATCCAGCAGATCAGCACTGTGGATGGACAGAGCGTTCAGCAGCTGATGACGGGGGACAACCAAGTGACAGAGGTTCAGTACATCATTTCTGAGGAGGGCGTGCAGCACCTGCTGCCCCAGGAGTACGTGGTGCTGGCCGATGGAAGCCACATCCAGATGCCAGATGGACAGATCATTCAGTATGAACACGACACGTCGTTTCTGCAGGAACAGATTGCAGTAACTCATGACGGTCAGATCCAGTACTTGCCCATCGGCTCTGAGCAGCAGATGGTCATTCCAGAAGAACTGGAGGCTGCGGCCCATTCTGCCGTCACAGCGGTGGTGGATGCAGCAGCCATGGCACAGTCCCAGACGGTGTACACAACAGAGGCCACGCCCGAACAGCTGGAGCAACTCCAGCAGCAAGGCATCCAATACGATGTGATCACCATCAGCTAG

Transcript

Protein

KAG7283873.1

MGSSAVALLVLGMCTMETWGLPVRSVFVTFPGDVVKNMTDIEMADKYLKRFGYVNSLQRSGFESLLSTTRALKKLQSQMGLEETGQLDEATLNTMKRPRCGVPDVRGYNTFDGDLKWDHHDVTYRILNYSPDIAASLTDDAFARAFKVWSDVTPLTFTHHGDGYPFDGADGFLAHAFPPGEGVQGDAHFDDDEFWTLGQGAVVKTVYGNAEGAVCHFPFTFLGKTYSSCTTDGRSDNLPWCSTTADFGRDTKFGFCPSERNSDNSPCVFPFVFLGETYDSCTTEGRSDGNRWCATTANFDEDQKYGFCPRRDTGVVGGNSPDEPCHFPFQFQGKMYDSCTAEGRSDNKLWCATTNNFDTDTKWGFCPDKGSKAGPDPSPPGPTDPTEPDTPTTPSTTTAAVEPTIDVCQVKTFDAITEIGKELHFFKDGYYWKMSSSDKAGVKGPFAMSERWPALPTTIDTAFEDLLTKKIVEKLGLPSSVQKVDGSLQRVKGKVLLFSGENFWRLDVKALKMDRGYPRLSDTTFGGVPGHVHDIFQHKGHMYFCHDRYYWRMNSRRQVDRVGYVKYDLLKLMDLEENEVESSSDAGPSGLEEPSESGMGMESSEAMSADSSDAAAPHAQIPESDCHVGQSSEGLVTSSSTDARVSSVHLPDSSSVAQSTSVSSVSTVTQSVLVSGSAQVLVHSSVVSDGAMMVSDSTASTSSDLGSAIDKIIESTIGPDIMNGCIAVTSAEDGGAETTQYLILQGPDDGAPMVAQMSSALSSRIATEASGEGPTSTCVDQGDLQGNLEPDDQPGYSGYLEEGGDQQPDQPQHSHPSQYMDCGVDGPDQTGESSSSIYAECSGDEPDQTRSRSGFPDYSGDNRRERDLPGYVECSGADSNPSSHGHYVVECSAGYLECGGEAEVERPHHSRNYIDSSADHGAQTGRQYAAEYRGDCVAAADSEQPGYSHCNNHDDDDEDDDDDYCDYSVQTHNLERPQHSHQQQHPLNSHCYVENSREGYADEGSSSSDHHPMADTVGSGGLPEALESSESQPGPFISSSGTYVAHPEPEAVPTQCSPCHKEPQGSQGLEVTPGPPGDSPTLAEVAEGSGERQPNLAELEEMMEVVIVQQFKCKMCPYKSTSKHTLINHMRDKHFRSAGGAQKKRGRGRPPKSETLARRQAEQKAAEERRAASAKPEEQQQAEEEYDEIVDAGAIDDPAVDSDYNPADEENRGRPPPTTAKPPPLPPISSSSSSSSSSSQRRPRRKVGRPRKYRLAEEGYGSKEAEDHAAKKARLDTEAAGPDEATSSGLGSVPTTNGSPDPAEPSVSQSDSENKDPSSNGGQEDEFPKKRGRPSKRFLRKKYRRYMNRKPHNCWICGSRFLSQEDLRFHVDSHEGNDPELFKCLQCNYHCKRWSSLKEHMFNHEGKKPFKCDECDYSSVYKKDVLRHSAVHNKDKQLPKVSQFPCPICHKVYPMQKRLTQHMKTHSTEKPHMCDKCGKSFKKRYTFKMHLLTHIQSLGDSKFKCEYCDYTCDNKKMLLNHQLSHTNDKPFKCDYCQYSTSKEEFLVSHLAIKHTGEKPFSCGLCHFTTKHRKNLRLHVQCRHPEAFEEWSATHPEEPVRRRRRPFFTLQQIEELKQQQDDVALDPATLLPIQGLGKASVSQDAHGNTTIIYEPAGPSDLSAQNALDLLLNMSNARELVGNSLQVPTDLHRTNKPSQPNTMSTSPALTGSVHQVAVLKSDSQAPGGATQKVVTFHVSESGEAVVQEAYEEAGAMETAELTQIAVEAYEGGGDFSVVEQAAEQVAEHVHSPDTGYSNEEGSPSPVVDVSESESLKSEKYYLTSSLADGVLQQVELSSEAPPSPSAVGSPGHNTKRFSCRVCMETFAGRSDMENHKRAHMDPSTFKCSDCNFTASSWHNVKEHMTLHSYLRPHKFNRNGHLKFHMERLHNQETARKSRAPMAQQQTIIVNNEEVALATLQSLQGQTVLTQERLQALGQEHVIVTQEPTLSNQEEGQYIQQISTVDGQSVQQLMTGDNQVTEVQYIISEEGVQHLLPQEYVVLADGSHIQMPDGQIIQYEHDTSFLQEQIAVTHDGQIQYLPIGSEQQMVIPEELEAAAHSAVTAVVDAAAMAQSQTVYTTEATPEQLEQLQQQGIQYDVITIS

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00040	fn2	Fibronectin type II domain	Domain	Interproscan
PF00045	Hemopexin	Hemopexin	Repeat	Interproscan
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF00413	Peptidase_M10	Matrixin	Domain	Interproscan
PF01471	PG_binding_1	Putative peptidoglycan binding domain	Domain	Interproscan
PF13912	zf-C2H2_6	C2H2-type zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000562	Domain	Fibronectin type II domain	Interproscan
IPR000585	Domain	Hemopexin-like domain	Interproscan
IPR001818	Domain	Peptidase M10, metallopeptidase	Interproscan
IPR002477	Domain	Peptidoglycan binding-like	Interproscan
IPR006026	Domain	Peptidase, metallopeptidase	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR013806	Homologous_superfamily	Kringle-like fold	Interproscan
IPR017956	Conserved_site	AT hook, DNA-binding motif	Interproscan
IPR018487	Repeat	Hemopexin-like repeats	Interproscan
IPR021158	Binding_site	Peptidase M10A, cysteine switch, zinc binding site	Interproscan
IPR021190	Family	Peptidase M10A	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR036365	Homologous_superfamily	PGBD-like superfamily	Interproscan
IPR036375	Homologous_superfamily	Hemopexin-like domain superfamily	Interproscan
IPR036943	Homologous_superfamily	Fibronectin type II domain superfamily	Interproscan
IPR050688	Family	Zinc finger and ubiquitin peptidase domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24403	ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0007420	Biological Process	brain development	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0010468	Biological Process	regulation of gene expression	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0050769	Biological Process	positive regulation of neurogenesis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-