Gene detail

Detailed information of KAG7283663.1 in Coryphaenoides rupestris Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAG7283663.1	SHC TRANSFORMING PROTEIN	PIJE02000003.1	1235376	1250409	+

Gene Structure

More details in Jbrowse Sequence

CDS

KAG7283663.1

ATGCTGCTGAAGCCAAAGTATGACCGCTTTCGCAACGACTCTGTGACCTCCGCTGACGACCTGATGCAGAGCCTAGCCATGAGCGGCAAAGTGGTGGCCACGCCGGTGGTCCCTTCCTCCACCCCCAGCCTGCCTCTGCCTCCCCTGCCCCCTCTGGATCCCAGGTCCTCCTCCTCTTCCTCCGCCTCTACTGCCGGGGCAGCAGCCCTGGCCGACTCCCCTTGCCTGGACGGGGAGCAGGACTCCACCACAACCTTCTGCATGCTCATCCCCAAGATGCCCCAGTGGAAGTTCTCCAACTCCCTGTTGAGCCGCAGCCCCTCCAACTCCAGCTCCGGCTCCGGCTCCAGCAAGGACTCGGTGAAAGCCTCCTCCCACGGACCCGGCGGCACGGCTCAGGCCAGTGGCCCCGTGGCCAGCCTGGCGGCGGTGCTTAACTCCTGCGACCCGGTTTGTGTCACCCCCTGTTCCCTGCAGGCCTTCAGAGGGCAGAGGTCAGTCGCCGCCGCCACCGCCGCCGGCTCGGTCATCCTGGGGGGACACGGCTTGGGTCCCTCAGCTGAGATCACAGGGAGCCCCGGAGGCTCCAACGGCAGGGGCAGCTCCAGGTCAGGCATGAGTCGCAGAGCCAGGGTGGAGGGCATGTGGCTGGGGGGAGAGGACTTTAACCAGAAGGGAGGCTTCCTCCATAAGCCCTCGCAGGGCTGGCTGCACCCCGACAAGAAGATCATGGGACCCGGGGCCTCCTATATCGTCAGATACATGGGTTGCATCGAGGTGCTGAAATCCATGCGCTCGCTGGACTTCAACACCCGGACTCAGGTGACGAGGGAGGCCATCAACAGGCTGTGTGATGCCGTGCCTGGTGGCAAGGGGGCGTGGCGGAAGAAGGCCCTGAACAAAGCCCTTCTGTCCATTATGGGGAAGAGCAACCTCCGCTTTGCAGGCATGAGCATCGCGGTCAGCATCTCCATAGAGGGCCTCAGTCTGCTCATCCCGACCACACGACAGGTGATAGCACACCATCCGATGCAGTCAATCTCCTTTGCCTCTGGTGGAGATACGGACACGCCGGACTATGTCGCGTACGTGGCCAAAGACCCAGTCAATCAGCGAGCGTGTCATATCCTGGAGTGCTCCGATGGTTTAGCCCAGAGTGTTATCAGCACTATCGGCCAAGCATTCGAACTGCAGTTCAAGCAGTACCTGCACAGTCCCCCGAAAACCGTGGCCTCTTCCATGGAGAGGAACCACAGGCTGGAGGAGCCCTTGTGGGGAGAGGAGGACGAGTCCTTGGAGCACAACTACTACAACAGCATCCCGGGGAAGGAGCCTCCGGTGGGTGGCGTGGTGGACTCCAGGCTCCGGCCCAGCACCTCCACGATAGGCCACATCCACACCCAGCCACAGAGCAAGGCAGCCACTCAGATAAGCTCATCAGGGAGGAGAGAACCAGTGTCCTACGCTGCAGGACAGCTGTGCTTTGAGCTTCACTGGGACACCGAAACCAGCAGTAGCTCAGACGGCTACCTGTGTGCAGACGGCCAGTCATCCAGCCACAGGGACTACGAGGAGCACCTGTATGTCAACACGCAGAGTCTGGACTGCATGGAGGCCCTGGCAGCGCATGGCCCCAATGGACACATCAAGGGTCCCGACAGCCCCAAGAAAGACATCTTTGACATGCGACCCTTCGAAGACGCTCTGAAGCTCCACGAGGCCAGCGGAGGAGCTGGAGGAGCAGGAGCTGCAGGAGGTGTGGGAGGAGTAGGAGCAGCGGCGGGTGTGGTGGTCCTGGAGGACCAGTGGCCCAGCCCGCCGCGCCGCCGAGCCCCCGTGGCCCCCACGGAGGAGCAGCTACGCCGGGAGTCCTGGTACCACGGCCGCATGAGCCGGCGGGACGCGGAGAAGGTGCTGATGCGGGACGGGGACTTCCTGGTCCGGGAGAGCACCACCAACCCGGGGCAGTACGTCCTGACGGGCATGCACTGCGGCCTGCCCAAGCACCTGCTGCTGGTCGACCCTGAGGGAGTGGTCCGGACCAAAGACATGTTATTCGAGAGCATCAGCCACCTGATCTCCTACCACCTGAAGTATGAGCTTCCCATTGTGGCGGCGGAGAGCGAACTCCACCTCAAACAGGTGGTCCGGAGGAAACAGTGA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017	SH2	SH2 domain	Domain	Interproscan
PF00640	PID	Phosphotyrosine interaction domain (PTB/PID)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000980	Domain	SH2 domain	Interproscan
IPR006019	Domain	Phosphotyrosine interaction domain, Shc-like	Interproscan
IPR006020	Domain	PTB/PI domain	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR035676	Domain	SH2 adaptor protein C, SH2 domain	Interproscan
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR051235	Family	Centrosomal Protein 152/SHC-Transforming Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10337	SHC TRANSFORMING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0019901	Molecular Function	protein kinase binding	Interproscan
GO:0030971	Molecular Function	receptor tyrosine kinase binding	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-