Gene detail

Detailed information of KAG7282449.1 in Coryphaenoides rupestris Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAG7282449.1	AP COMPLEX SUBUNIT MU	PIJE02000024.1	976137	981876	-

Gene Structure

More details in Jbrowse Sequence

CDS

KAG7282449.1

ATGTCGTGTGTCTTTGCGGACGATGAGGGCATAGACATGGACTCCATCAGCTGGAGCTCCAGCAGTCGGCAGACCAACATTGTCCCGGTGGAACAGACCAGCCGTCTCAACTCCTGGGTTACCTTTGACGATGATGGGAAACCCACCCAGACTTCTCTCCCTCACAATGCCCTCCCCCCACCTCATGGCCACCACGATGGCAACAGTAACCACGCGGCTGTCCTACCTGGGAGCCATCTCCGGGACCTTGCCCCGGATGGCTCCAGCAATGGAGGCTTCCACCCTTCAGTGAACGGTAGCGTCTCCTATGCTGAGAAGAATCCGTTCTTCAATGAGGCATTTGATGATGTCAAACCCTCCGCCATCAACCCCTTTAGCTCTTTCTTCGACGGCGGGCAGAAGATGAAGCAATGGTCCCAAGCTGATGGTCCTCATGCGGACCTCGGATCGGACTCGGTTTACCCCGTATGCCAGTCACAAAACCCTCAAGCAGTATTTCCCTTTGGGGGAGGAGGAGGAGGAGGTGGAGACCTTTTCCATGACAGCCCTGTAACTAACAAGCTGGAGGAGTTGGAGCACCTGAAGAGCCTGCAGATTTCGGATCCAGACCACACCGGTGGTCCTGACGACGAGGATGAGGGCGTGGAGGAGGGGGAGGAAGCGCTGGAGCAACTGACTGGAGATGGCGCCCCCTACATGCCGAGTCACATGGTCACTCAGGAGGGCTGGCCCATGCTCCTCCGCATCCCAGAGAAGAAGAACATCATGTCCTCCCGCCACTGGGGGCCCATCTACGTGCGTCTGTCTGACGACGGCTTCATGCGGCTCTTCTACGAGCGGGGGCTGGACAAGCCCTTCCGCAGCCTGCGCCTGCAGCCCCGGCACGAGGTGTCCGAGCACCGGCTCCAGAGTTACGAGGACACGGGCCGGGTGCACACACTGAGCGTGGAGCTGCTGCAGTACCGCGAGAAGAGGCGCATGCAGCCCAAGTCGCCCGTCACACACCAGCCGGTGCGCGAGCAGCTGGTCAAGCTGGCCACCTCGTCTTACCACGACTATCTGAGCTTCAGGCACGCGCTGGTGCAGCTGCTGAGGCGGCTGCCTCCTTCCGATGGAGCTCTCCCGGGGTCCCCGGCGCTGGTCCCCACCACCCCGGTGCTGGGGGGGGCTTCAGAGGAGGAGATGCAGGTGGAGGTGAGGGATGAGTTTTACGGGAGGGTGGCTGAGGACGACGGGCGGATCGTGGAGCAGCTGGTGGTGACGCGGGTCAACGTGCTGGCATTCCTCTCGGGGCTGCCACGCTGCCAGCTGGGCCTCAATGATGTTGAGGTGAAGGGGAAGGAGTTGGTGTCGCGCCACGACATCGTCCCCAGCAGCACCACCCGCTGGATCCGGCTCCTCCACCCCGAGCTCCACGAGGAGCATGGCGACGAGCTGGAGTTCCTGTCCACACGTGCCGTGGTGTTCACGCCGCCGCCGCGCTGCCGCTTCGAGTTGCTCCGCTTCCGCACGTCGTTCGCCGAACGCTCGCTGCCCTTCACACTGCGCACCGTGGCATCGGTGAAGGGCGCCGAGGTCACCGTGCAGTCCTGGCTGCTCATGGCGCAGGGCTTTGTGCCGAACCGCAACGCGCTCACCATCATCCCCTGTGAGAATGTGGCGATACGCTACCCAATCCCTGAGATCTGGGCGAAGAACTTCCGTCGAGAGGGCGTCATCGGGGAGAAGTCCTTGAAGGCGAGGTTCAACAAGGGAGCTAGCTTCGGGACGGCCAGCTCTTCCGGGGCGGAGCCCGCCATGAGAGTGACGCTGGGCGCTGCCAAGTACGAGCAGGCGTTCAAAGCTGTGGTCTGGAGGATACCTCGGCTCCCTGACAAGAACTCAGTGCTGGGTCACCCGCACACCTTCTTCTGTCGCCTGGAGCTGGGCTCCGACCAGGACGTGCCCCAGGCCCTGGAGCGCCACCTGGAGGTGGAGTTCGACATGCCGGCGGCCGCCGCCTCCAAGACCACCGTGCGCTCGCTGTCCGTGGACAACAGGACCGACGTAAAGAAGTGGATCAACTACAAGTCCCACTTCTTCTACCAGGTACCCATTGCGCAAAAGAGGGAGGATGTCACAAACCCGCCTGCGGACCAGCCTGGAGAATGTGCACCTCAGTGA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00928	Adap_comp_sub	Adaptor complexes medium subunit family	Family	Interproscan
PF12016	Stonin2_N	Stonin 2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012320	Domain	Stonin homology	Interproscan
IPR017110	Family	Stonin	Interproscan
IPR022699	Domain	Stonin-2, N-terminal	Interproscan
IPR028565	Domain	Mu homology domain	Interproscan
IPR036168	Homologous_superfamily	AP-2 complex subunit mu, C-terminal superfamily	Interproscan
IPR050431	Family	Adaptor complexes medium subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10529	AP COMPLEX SUBUNIT MU	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006897	Biological Process	endocytosis	Interproscan
GO:0008021	Cellular Component	synaptic vesicle	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0030100	Biological Process	regulation of endocytosis	Interproscan
GO:0030136	Cellular Component	clathrin-coated vesicle	Interproscan
GO:0031410	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0035615	Molecular Function	clathrin adaptor activity	Interproscan
GO:0048488	Biological Process	synaptic vesicle endocytosis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-