Gene detail

Detailed information of KAG7282143.1 in Coryphaenoides rupestris Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAG7282143.1	PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE	PIJE02000030.1	108816	143445	+

Gene Structure

More details in Jbrowse Sequence

CDS

KAG7282143.1

ATGTCACTAAGCCTTGCCGTACTGGACGGCTCGGAGATCGTCGTGGGTGTCGATGAGGAGGAGAGGAGGGTGCGGGCGAATGACAGAGAGTACAACGAGAGGTTCCAGTACGCTAGTAACTGCATCGTGACATCCAAGTACCACGTCCTGACCTTTCTGCCCGTCAACCTTTTCGAGCAGTTCCAGGAAGTGGCCAATACCTACTTCCTGTTCCTGCTCATACTGCAGTTAATACCTCAGATATCCTCCCTCCCCTGGTTCACTACCATCGTGCCTTTAGCTCTGGTGCTGAGCATCACCGCAGTGAAGGATGCCACAGACGACTATGTGAGTACGGACACCGGAACATCCAGTAGGTCCAATTTTCGACATAAAAGTGACAAGCAAGTCAACAACCGTCAGTCTCAGGTCCTCATCCATGGCTCTGTTCAGAATGAAAAGTGGATGAATGTTCGAGTGGGGGATATTATTAAACTGGAAAACAACCAGTTTGTGGCAGCTGACCTGCTCCTGTTGTCCAGCAGTGAACCTCACGGCCTGTGTTACATTGAGACTGCCGAGCTGGACGGGTTAACGGGCGAGGTGGTGTGTGAGCCTCCTAACAACAAGCTGGACCGCTTCTCTGGGACGCTGTACTGGAGGGAGTGTAAATGCGTCCTGACCAATCAGAACATGCTGCTGAGAGGCTGTGTCCTGCGCAACACCGAGGCCTGCTACGGCCTCACACCGTGGTTGTGTATCTCAGGGCCAGATACCAAGCTGATGCAGAACAGCGGTCGCACCAAGTTTAAACGTACAAGCATAGACTGTTTGATGAACACCCTGGTGCTCTGGATTTTCTGCTTCCTGGTGTGTATGGGTGTGATCCTGGCGGTGGGCAACGCGGTGTGGGAGAAGGAGGTGGGCTCTCTGTTCCAGAGCTACCTTCCCTGGGACCCCCCCGTGGACAACTTCCTGTTCTCTGCCTTCCTCTCCTTCTGGTCCTATGTGATCATCCTCAACACCGTGGTGCCTATCTCCCTCTATGTCAGTGTGGAGGTGATCCGGCTTGGCCACAGCTACTTCATCAACTGGGACAGACAGATGTTCTGCACCGAGTGTCTGACGGCGGCCGAGGCCCGGACCACCACCCTCAACGAGGAGCTGGGACAGGTGGAATACATCTTCAGTGACAAGACGGGGACTCTCACACAAAACATCATGAGCTTCAACAAATGCTCCATCCACGGCCAAGTGTACGGGCCAGATACCAAGCTGATGCAGAACAGCGGTCGCACCAAGTTTAAACGTACAAGCATAGACTGTTTGATGAACACCCTGGTGCTCTGGATTTTCTGCTTCCTGGTGTGTATGGGTGTGATCCTGGCGGTGGGCAACGCGGTGTGGGAGAAGGAGGTGGGCTCTCTGTTCCAGAGCTACCTTCCCTGGGACCCCCCCGTGGACAACTTCCTGTTCTCTGCCTTCCTCTCCTTCTGGTCCTATGTGATCATCCTCAACACCGTGGTGCCTATCTCCCTCTATAGCTACTCCTACACTGAGGTGGAGCCCACCTGTCCCAGCTCCTCGTTGAGGGTGGTGGTCCGGGCCTCGGCCGCCGTCAGACACTCGTTCCTGTCGGACACCCTGCACCGTGTGGCCATTGACGATGAACACTTCGCCCATGTCGTCCGAGGGCCAGGGAACGCATGGTGGAACTTTCCCAAACCCGAGGGGGAGGAGGAGCCGGAGGAGCAGCAGGAGGAGGAGGTGCAGGAGGAGCAGGAGGAGGAGAAGCAGCAACAGGAGGAGGAAGAGCAGGAGGAGGAGGGAGGGAGGACAGTGGGCCAGAGGGTTGTGCTGAGGGATGAGCGGCTGGCAGACGTCTACGAGCAGATAGAGCAGGACATGATGCTCCTGGGAGCCACCGCGATAGAAGACAAACTGCAGGAGGGTGTTCCTGAGACCATCGCCATCCTGTCCCTGGCCAACATTAAGATCTGGGTCCTCACTGGAGACAAGCAGGAGACCGCGGTGAACATTGGCTACTCCTGCAAGATGCTGACGGACGACATGGGCGAAGTGTTCATCGTCAATGGCCACACGGTGCAGGGTGTCCGACAGGAACTGAGGTCAGCCCACGCCCTGGAGGCGGACATGGAGGCGGAGCTGCTGATGACGGCGTGCGCCTGCAAGGCGGTCATCTGCTGCCGGGTGACGCCCATGCAGAAGGCCCTGGTGGTGGAGCTGATCAAGAAGCACAAGAAGGCCGTCACCCTGGCCATCGGGGACGGCGCTAACGACAACTTTGCCTTCACCATGGTGCACTTCTGGTTCGGCTTCTTCTGCGGGTTCTCCGCCCAGACAGTTTATGATCAGTACTTCATCACGCTGTACAACATAGTCTACACTTCTCTACCTGTGCTCGCGATGGGGATATTTGACCAGGACGTTCCGGACCAAAGGAGCCTGGAGTACCCCAAGCTGTACGAGCCGGGGCAACTCAACCTGCTCTTCAACAAGCGGGAGTTCTTCATCTGCATCTCCCAGGGCATCTACACCTCCGTGGTGCTCTTCTTTGTGCCCTACGCCGTCCTCTCCGACGCCAGCCAGGACACCGCCGAGCCCCTGGCCGACTACCAGACATTTGCCGTCACCACGGCAACGTCCCTGGTCATCGTCGTCAGTGTCCAGATTGCTCTGGACACAGGCTACTGGACAGTCATCAACCATGTGTTTGTGTGGGGCTCTCTGGGCTCCTTCTTCACCATCATGCTGGCCATGCACAGCCAGACCCTCTTCAGCTCCTCCCCCAACCAGTTCCACTTCGTGGCGCACAGAGCACTTTACTTGCAGCCGGTGGTATGGCTGACCATCGCCTTGGCAACAGTGATTTGCATCGTTCCGGTGCTGGCGTTCCGCTTTCTCAAGATCGACCTCAAGCCCCAGCTGTCTGACACGGTGCGCTACACACAGCTGGTGCGGCAGAAGAAGCGCAAGGCGGTGGGCTTCAGTGGGGCGGGGGTGCGGGGGGCGGCGGGCAGCGCATCGGAGGGCCGGCTGGGGCCCCGCGGCGGTTCCCGCAGGTCGGGCTACGCCTTCGCCCACCAGGAGGGCTTCGGCGAGCTGATTACGTCGGGCAAAAACATGCGTCTGTCCTCGCTGGCGCTGGCGTCCTTCGCCTCGCGCCACAGCTCCAGCTGGATTGACACACTGCGCAAGAGGAAGCACAGTCACGCCCACACCCCGCCCCCCGGGGCCACCGCCGCCGCCTCGGGCGACAGCAGCCCCGCCCCCAGCTGTGCCTCCGGCTCGGCCGCGCCCCCGCTCTCCAACTCTCCCTCGGCGCTGGGTGGCTCCCAGGACACGCCCATCGAGGAGGAAGAGGAGGCGTGCGCCACGCCCTCCACATCGCACACGCAACCTCCCCCCCCCGGGGCTCTGACGGCGACCTCCGAGTCCACTCCCACCTGGGGCCCCTCCTCCTCTGTGCGGACCCCTGGGGCTACGACCAGCTCGGGGTCTTCAGCAGCGGGGAACCAGGCTGGAGGAGAGTCGGGGGGCTGGAGCCTC

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16209	PhoLip_ATPase_N	Phospholipid-translocating ATPase N-terminal	Family	Interproscan
PF16212	PhoLip_ATPase_C	Phospholipid-translocating P-type ATPase C-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008250	Homologous_superfamily	P-type ATPase, A domain superfamily	Interproscan
IPR018303	PTM	P-type ATPase, phosphorylation site	Interproscan
IPR023214	Homologous_superfamily	HAD superfamily	Interproscan
IPR023298	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan
IPR032630	Domain	P-type ATPase, C-terminal	Interproscan
IPR032631	Domain	P-type ATPase, N-terminal	Interproscan
IPR036412	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR044492	Domain	P-type ATPase, haloacid dehalogenase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24092	PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005802	Cellular Component	trans-Golgi network	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007030	Biological Process	Golgi organization	Interproscan
GO:0045332	Biological Process	phospholipid translocation	Interproscan
GO:0140326	Molecular Function	ATPase-coupled intramembrane lipid transporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-