Gene detail

Detailed information of KAG7279994.1 in Coryphaenoides rupestris Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAG7279994.1	ARYL HYDROCARBON RECEPTOR	PIJE02000079.1	267922	310984	-

Gene Structure

More details in Jbrowse Sequence

CDS

KAG7279994.1

ATGTTGAGCACCATGAAGCCCTCTGCAGCCAGCTTGAAGACTAACCCGTCCAAAAGACACAGAGAGCGGCTGAATGCTGAGCTGGACCGGCTGGCCAGCATGCTGCCCTTCAGCCCAGAAGTAATCTCCAAGCTGGACAAACTATCCGTGCTGCGCCTGGCCGTCTCCTACCTCCGGGTCAAAAGCTTCTTCCAAGCCCCCCAGCACCACCAGCAGCAGGGCCACTGCAGCCTGCACAGCCCCCTACAGACCAGCAGCCCCCTGCTGGAGAGTGACATGCTGCTGGAGTGTTTGATTGGCTTCGCCCTGGTCATCACCAGTGACGGACTCATTTTCTACGCCTCCGCCAGCATCGTGGATTACCTGGGCTTCCACCAGGTAGTGTCTCACATCCTGCCTGCGCTGAAACCATTGGACCAAACGGACGTCATGCATCAGAACGTGTTTGACTATATCCACGTGGAGGAGCGACAGGAGTTTCGCAGGCAGCTCCACTGGTCTATGAGTCCGCCGGCCACCCAGAGCAACTCCTACCAGCAGACTGGAGAGCCTGGAACAACAGGTGAGGAGTTCTTGATGGGAAGTTTATTCAACGCCAAGGAGCCAGATGGCGTCACGTTAGAACTAACGCCGTTTCTGACCCGCTGCTTCATCACCCGTGTCCGCTGTCTGCTGGACAGCACTTCAGGCTTCTTGAGCATGCAGTTCCAGGGCAGCCTGCGCTTCCTGCAGGGGCAGAAGAGGAAGACGGAGTATGGGGGGCCGCTGCCCCCCCAGTTGGCTCTGTTCTGCGTGGCCGTTCCCCTGGCCGTGCCCTCCGTCACAGAGCTCCGGCTGAAGGGCATGGTGGTCCGCAGCAAGGCCAGGGGGAACGTCGGCAACACACCAGAATGCAGTGAAAAGAAGCCCCTCCCTTCCCGAGGATCATGTGATGGCAGCGACTTCCTGCTGTTCAACTGGAAAGGTGCCAATCTGTCCAGGGGTGACCCGTGTCACCATTACAGCGCGTGGTCGCCTCTCTCTACAAACCCCACCCTGCGCTACCGTGGTGAGGTTTTCTATCAACAGGAGGAACCCCTCAACTTCTGCCTCTCCTCTTTGGCCGGTGGTGCCACCGGACACAAGTCCCCAACCGCCTTGCGGTCAGAAAACCCTCTGCCTTACTGGGATCCGGCCCGGGCCCAGCTGGGCTGGTCCCGGAAGCAACAGGCCGCTGGGGGCTACCTCCTAGGTAACCTGCAGAGGAAAAAATACCCCACCCCCAACCAGGGGAAGCAGGGTGGGCTTGGAATGGGCTCAGACCTGATGTGCAGGCAGGAGGGTATCCGAGCATACGAGGGGCTTCCCAGCCACACAGAAAGGTACACTGAGGAGGTGGAAGTGCGAGGAGGGTCCCTCGGGTGTGGGATGGACGGCTTCGGTGGTCTGGTGCTGCCTGAGTCCAGCATTAAGACGGAGAACGACTCCGACTCTGAGAGCCCCGCAGGGAGGCATCTGTACGCCGGTGCATGGGAGAAGCATCACTACCTAACCTCCTCCTCCATGTATCCTGACCACCACCACCAGGTCAAGACAGAGGCTGACTTCTATGACCACTTCAACACCTGCCAGAAAGCCAAGGGCTGCAATGGCGACTCTGGCATCGGCCCCCCCTCTCCTCCCCACAACTCCATCAGCGGACACCACAAGTACCTGTACGCCACTGCCGTCAGCCAGCTCTCCTCCACCGGCGCCCTGTACGCCAACAAGAGCCTGGCCTTGTTCAGCACACAGCGTGCCACACCCCAGGCCTTCCCCGTCCTGGGCCCAGTGGGTGGCGGAGGCGGGGGCGACTGCCCGGGGAGAAACGGTTACGGCGAGGCAGAGCTGAAGGGCTACGGCAGCAGGGTGCGCCAGGAAGAAGAGCTGGAGTACCAGGAGTTCCAGGGTAGCGTTGGTGGCGGCGCAGTGCAGGCCATCAAGCAAGAACCATTGGATTCTCCTCCATGGTCTGACGGCCAGCGGCAAGACATGAGCCACTTACCTGTCTTTGGGCTCAACAGTTTGGGGAATAAACCCCACCAGTACATATACATGCAGTAG

Transcript

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	bHLH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00010	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000014	Domain	PAS domain	Interproscan
IPR011598	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR036638	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan
IPR039091	Family	Aryl hydrocarbon receptor/Aryl hydrocarbon receptor repressor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10649	ARYL HYDROCARBON RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0004879	Molecular Function	nuclear receptor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0006805	Biological Process	xenobiotic metabolic process	Interproscan
GO:0009410	Biological Process	response to xenobiotic stimulus	Interproscan
GO:0034751	Cellular Component	aryl hydrocarbon receptor complex	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-