Gene detail

Detailed information of KAG7277898.1 in Coryphaenoides rupestris Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAG7277898.1	KINECTIN	PIJE02000138.1	482528	505195	+

Gene Structure

More details in Jbrowse Sequence

CDS

KAG7277898.1

ATGTTCCAGAGCACCAGTCCATCTCAGCATCCTTTTCGATTGGGTCAGGCAAGTTTCTTCGTCCCTCAGTCTTCCACGAGCACCTCTTTCAGGGGAACGCCGAGATACAGAAAGACCCCCGGTTCTGGTGCCACAGGGGCCCATTCTGCACGGACCCCGCTCACTGAACCTACCGACCTTTCCAATCACGTAGGGACGACTTGCTCCTCTGGTACGTCCACCAGCTCTGCTTCTGTGGTCGTTGCGGTGGTGGAAGGGCGGGGTTTGGCCAGGGGAGAGATCGGCATGGCCAGTCTCAACTTGAGGTGTCCAGAGCTTATACTAATGCCAGACACAGCCAGCGGGAAGGGTAAAGGGACCAAGCTCTTTAACCTCATCACCGAGAACTTCCAGGGGGTTTCTTTTACTGCCATCCAAAGGAAGTACTTTAACGAGAGGAAAGGACTGGAGTACATTCAACAGCTGTGTGCTCCAGAGTTTGGGACCGTTGTCATGGAAGTGCAAGCTAAGTATTATTGCTTGGCCGCTGCAGCTGCACTGCTGAAGTACTTGGAGTTCATCCAGAACTCCATCTATGCTCCCAAGTCACTCAAAGTCAGCTTTAAAGGGAGTGAGCAGACCGCCATGATTGACTCCGCATCTGCCACTAACTTAGAGTTGGTGGTCAACAACAGGGACCGCAGGAGCGAACATACCCTGTTTGGAGTGCTTAACTACACTAAAACCCCGGGTGGTGGTAGACGGCTGCGCTCCAACATCCTGGAGCCCCTGCTGGATGTGGACACCATCAGTATCCGCTTGGACGCCATACAAGAGCTGTTGCAGGACGAGGAGCTGTTTTTTGGCCTGAAGAATGCAATAGGCCATTTCCTAGATATAGATCAACTGCTCTCGGTTCTTGTCCAGATCCCGAAGCAGGAAACGGTGCAAGTTGCTGAGGCAAAGATTACACATGTTATTCAGTTGAAACACACGCTGGATTTGGTGCCATCCCTAAGGTTTAACCTTCGAGCTGACTTTGCATCCTGTGTCTTCTCCTCGTTTGACACGATCCTGGAGCATATCAAGACAGTCATTAATGACGACACCACCTACATGAAGGGCAGCCTCAGCATGCGCACTCAAAAGTGCTACGCTGTGCGTCCCAACATCAACGAGTTCCTAGACATCGCCCGGCGAGCGTACACGGAGATTGTGGATGACATTGCAGGGCTGGTTGACCAGATGGGGGAGAAGTATGGCCTGCCAATGCGTACGAGCTTCAGCACGTCCAGAGCTTTCTTCATTCAGATGAAGCTTGAAGGTGTGGCCTTACCAGATGGAAAGCTCCCCGCTGAGTTCCTAAAGGTAACCAAGCAGAAGAACAACTACAGCTTCACTACTGCAGATTTGATGAAGATGAATGATCGCTGTGATGAGGCCCTGAGGGAGATCTTCCACATGTCCTATGTGGTGATATGTCAACTGCTGAGTACTCTCCATGAGCATATCCACTGCCTTTACAAGCTCTCAGAAGCGGTTTCAATGCTGGACATGTTGGTGTCTCTTGCCAATGCATGCACAATATCAGACTATGTGCGTCCAGAGTTTACAGACACGCTGGCTATCAAACAGGGGCGCCACCCCATTCTAGAGCGCATCGCCGGCCAGCAGCCCGTGTCCAACAACAGCTACATCTCAGAGGGCAGCAACTTCGTCATAGTCACTGGACCCAACATGAGTGGAAAATCCACTTACCTCAAACAGGTGGCGCTGTGTCAGATCATGGCTCAGATAGGCTCCTTTGTTCCTGCAGAATATGCCTCGTTCCGCATTGCCGATCAGATATTCACGAGAATTGGGGTGGATGATGATTTTGAGACCAACTCTTCCACCTTTATGGTGGAGATGAAGGAGATCTCCTACATAATCCACAATGTCAGCAGCAGATCTTTAATCATCATAGATGAGTTGGGGCGTGGCACCAGTGCGGAGGAGGGCATTGGTATTTGCCACGCGGTGTGCGAGTTCCTCCTCAGCCTAAAGGCGTTCACCTTGTTTGCGACACACTTCCTGGAGCTCTGTCAGCTCGAGACGCTCTATCCCAACGCGGAGAACCAGCACATGGAGGTGCAGCACGCGCGCAGTGACGCCGGCGCCGAGACCGTACTCTATACCCACGTGCTGTGTCGAGGACGCTCAGAAGAACGACAATACGGGTTGAGAGCAGCAGAGATGACTGCTCTGCCACCAAGCATTATCCAAGATGCAAAGGCCATTTCCTCCAGGGTCAGCCAGCAGCTTTTGGCCAAACAGCACAGTGATCCAGAAGCACAACAGCAGAGAGCGGCGTACCATTTGGCCACTCGCCTCTTGCAAACTGCTCGGAACTCCAAACTGGACCCAGACAGCCTGCGGATCTACCTGAAAGGCCTGAGGAAGAACTATGAGGCGTTACTGCAGGCGGGGAACCAAAACGTGCGCTCCTCGTCAGCCCAAACTGACCCCGCCCCTCCCGTGAAAGCGAAACGGCTGTGTTGGGTCGAGCGACGGCGCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGGAGAATGGCGGTGGACATCTACGACTCCCAGTACCTTCTCATCCTGGCCCCATCCCTGGTCATTGCCCTCATGTTCCTCTTCTTCTGGCTCTTCATGAAGGAGACCTCCTACGACGAGGTGCTTGCCAAGCAGAAGCGAGACCTCAAGCTGCCGCCGTTCAAGCCTGACGTCCGCAAGAAGGGTGACAAGAAGAAGACCAAGAAGAAGGAGAGTGCAGGAAGCGGGGCAGGAAGTGGCGGGGGTGCCGGAGGAGGAGGAGGAGGAGACTCTGAGGAGGACCAGCGGGACTTTGACCTGACCGACCCCGCCAACAGCTCCTCTCCTGAGCTGGAGGACGAACCCGTGGAAGTGATCCTGGCCACCGCTGCTCCTGTATCCGTGGCCACCGTGCCGGTGGAGGCTCCTGCTGGTTTGAGGGAGCGGAAGAAGAAGGAGAAAAAGGCAGCCAAGGCTGCTGCAGCAGCGGCGGCGGCGGCGGCGGCGGCAGCAGCAGCTCCTCCTCCTACTCCCTCTCCTCCTGAGGAGCCGGTGGTGAATGGCGGCAGGCCTGCTAGCCGTAAGGCGGAGCCGGCGATCTCTGCGAGCAAACAGCCCAGCTCAGCCTCTCTGCAGCCTGATGTCCAGATCCAGCTCCAGGCCCCAGTCGTGGCTCAGGTCCAGGCCCCGGTTCAGACACCCCCTCCAACCTCTGGGAAGAAGAAGGACAAGAAGAAGCAGAAAGTGGAAGCAGTTGAGGACCAGCAGCGAGAGGAGATGAAAGTGGAGCAGGTCCACTCCGCTCCGGCCCCACTCAGGAAAGAGGCTCCCCTGATGCCTGAGACCAGGGCCCAGGACGGCGTTCCCCCCGTCGCCACCAGTGGCAAGAAGAAGAACTCTGCCAAGAAGCAGAAGGCTGAGTCTGCTGACGAGCCCCACGTGCTGGCCGAGGCAGCCGCTCCCGCCAACCACCAGGCTGCTCCCAGTGACAACGGCGCTCCCTCCAAGGGGAGTGGCAAGAAGCAGAAGAACGAAACGGACAAAGAGAACGCGGAGATGAAGTTGAAGGAACTGCTGGGCGGCCTGTCCAGTCTGGCTCTGTCGGAGGCCGAGGTGATGAGGGAGCAGCTGGAGGGCCAGATCAGTCGGCTGCAGCAGGAGAACAGCATCCTGAGAGACGCCGTCAGCTCTGCTGCCAACCAGATGGAGAGCAAGAACTCTGCGGAGCTGAACAAGGTGCGCTCAGAGTACTCGGGGCTGATGAAAGAGCTGGCGGAGACCAAAGGCAAGCTCCAACAGGAGGAGCACCAGAGGAAGTCGCTGGAGGTCGGCTACAAGCAGAACGCGTCTCAGCTGGAGGCTCAGCTGCAGGACGCCAAGAGACGCTGGGAAGAGCTCCAGAACTACCTGCACAAAGTTAACACAGAGCGGGAGAAAGTGCAGTCTGCCAAACAAGAGCTGCAGAACCAGCTGCTGGCCGTGGAGACGGAACTGAACAGCAAGAGCAACGAGGTCCAGAGCCTCCACGGCAACCTGGCGGAGGCCCTCCTCTCCAAGGAGCGGGTGGAGCAGAGGGTCCTACAGCTGCTGGAAGTCACCCAGCACAGCATACCCGACGAGACGCTGCAGACCCAGGTCCAGGAACTTCTAAATGAGAACAAAGGCCTTCAGGTGCAGATTGAGTCACTGCAACACCAGAACGATAACCTGCAGGCCCAGATGTCTTCACAGGCCACGCACATCTCTCACTTTGAGGAGCTGCAGAAGCTGTTGGCTGAGAAGGAGCTGCAGAGGAAGAGTCTAGAAGATGCTCTGAACGCCGAGAGGAGCAGCGGGGCCAGCAGAGAGACCAACATGCAGGCCATGCACAATGAGAGCATGGCTCTGAAAGCAGAGCTTCAGAAACTGCAGGCTCAGATTTCTGAACAGAATGCCTCCCAGCTAGCGTTGGAGCAGATCCAAAAGAGCGTTCAAGAGCGGGAAGAGAACATCAGGACGGTGGAGGATCTGCTGAAAACCGGCCTCATCGAGGTGGCCAACAAGGAGGAGGAACTGAAGGTGGTGAGGGAGGAGAACCAGACCCTGAACAGAATGGTGGAGGCCCTGGTGCAGCAGGTCTCCGAGCAGACTACATCGGAGGAGGAGTTGAAAACCCAGCTCCAGCAGAAGGATGAGGAGGTCACGTCAGTGGAGGAAGGTCTCCGGACGGCACTGGGCTGCATCGGGAGCAGCAGCTACCATGTCTCCAGGCTGAGGCGGCGGCAGCTGAGGGCGCAAGGAGGCGCCAGGGGCATGCAGAGCAGCCGCCGACGCCCGGGGCCAGGCTCCTGGAGCTCCTAG

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00488	MutS_V	MutS domain V	Domain	Interproscan
PF05104	Rib_recp_KP_reg	Ribosome receptor lysine/proline rich region	Family	Interproscan
PF05190	MutS_IV	MutS family domain IV	Domain	Interproscan
PF05192	MutS_III	MutS domain III	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000432	Domain	DNA mismatch repair protein MutS, C-terminal	Interproscan
IPR007696	Domain	DNA mismatch repair protein MutS, core	Interproscan
IPR007794	Domain	Ribosome receptor lysine/proline rich	Interproscan
IPR007861	Domain	DNA mismatch repair protein MutS, clamp	Interproscan
IPR024854	Family	Kinectin	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036187	Homologous_superfamily	DNA mismatch repair protein MutS, core domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18864	KINECTIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0006298	Biological Process	mismatch repair	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0015031	Biological Process	protein transport	Interproscan
GO:0019894	Molecular Function	kinesin binding	Interproscan
GO:0030983	Molecular Function	mismatched DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-