Detailed information of KAG7277870.1 in Coryphaenoides rupestris Gene info
Gene IDAnnotationScaffoldStartEndStrand
KAG7277870.1TRANSMEMBRANE SUPERFAMILY 6 MEMBER 1/2PIJE02000139.1431731442050+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors Familyzf-CCCH

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF05241EBPEXPERA (EXPanded EBP superfamily) FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR003954DomainRNA recognition motif domain, eukaryoteInterproscan
IPR009145FamilyU2 auxiliary factor small subunitInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR033118DomainEXPERA domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR047195FamilyTransmembrane 6 superfamily member 1/2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR14568TRANSMEMBRANE SUPERFAMILY 6 MEMBER 1/2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005765Cellular Componentlysosomal membraneInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0089701Cellular ComponentU2AF complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP