Gene detail

Detailed information of KAG7276695.1 in Coryphaenoides rupestris Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAG7276695.1	TRANSCRIPTION FACTOR CASTOR PROTEIN MING -RELATED	PIJE02000176.1	210672	225157	+

Gene Structure

More details in Jbrowse Sequence

CDS

KAG7276695.1

TATCTTATCTTAGAAACACATCAGCTGTGCACTCAGAGGCCTGGCAGATTAAAAACACTGAAACTGGATGAGCTGAGTGAAGAGCTCACTAAGCGCACCAGAGAGACCCAGCAGCTCCAAGAAGAGATTGACAAGGCCACCAAAGAAGCCTTCCAGAAGGTCTGGTGCTTTAACAGCCTCAAGACAACAGACGCCGTATCTGTGGGTTCAGACATCGGGTCGAGCAGCCAGGACCTGTCTCAGCTTGATGCCTGCGGTCGGGATGCTGGGAGCCTGGAGGCAGGGCGGCAGGGCGGCCGTGGAGAGGAAGGCCTGGAGCACCCAGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCATGACTGCCCCAAGATTCACATGACCACCACGAGCAGCAGAAGTTTCAACTCCGCCAGACGATCATCCAGCTGCAGACGGAGCTCCACCAGGTCAGCGGAGGAGAGGCTGCGGCAGGTGGAGGAGGAGGCCCGCGTGCTCAGGAGCAAGGCAGAGTCCCTGGAGGACACGGTGAGGGAGGCATACTCCACCCTGATGGCCCACCACCACCGTCGCCGTGGTGGTGGTGGTGGTGGTGGTGGAAGCCCCGGCCCCGGCCCCGCCCCTGCCCTTGGCACCGCCCCTGGCCCCGCCCCCGACAGCCCGGCTCGTCTGCTGCCCCTGGGGAGGCTCGCTGTGGAGGTTCTGGAGAAACTCAGGAGTGCAGAACTGAAGTACCGAGTGGAGGTGGAGGTCTTGCTGACGGAGCAACAGGACAGAATGGAGCAGCTAGTCGCCGGTCACGACCAGCAGGTGAGGGCCTTGGAGCAACAGCTGTCACAGGCTGAGTCTGATGCCCGCAAGGCCGAGTCCCGGGCCTGCAAGGCCAAGTCCCGGGCTCGCAAGGCCGAGTCCTGGGCCCATGAGGCGGAGTCCCGGGCCGGCAAGGCAGAGTCCCGGACCAGTAAGGCCGAGTTCCAGGCCCATGAGGCCGAGTGCCGGGCCTGCAAGGCAGAGTCCCAGGCCTGCAAGGCAGAGTCCCGGGCCAGCGAGGCTGAGTCTGAGGCCCGCAAGGCTGAGTCCCGGACCGGTGAGGCCGAGGCCCGGGCCCATGAGGCCGAGTCCCGGGCCCATGAGGCCGAGTCCCGGGCCCGCAAAGCAGAGTCCCGGGCCGGTGAGGCCCAGAGGGAAGGGGAGCCATCGCTGAATCGGGCGGAGGAGCTGCAGTCCCAGCTGGGCCTGCTCAAGAGGAGCGGGGAGCGGCAGCGGAGGTGGGAGCTCCGGGGGGAGGAGGAGGTGCCGGAGGAGAGGAGGAGGAGGTCCCAGATGCCCCAGACACAGGAGGAGCACCAGCAGGAGGTGCAGCACCTCAGAGAGCAGCTGAAGACAAGCCAGGAGGAGCAGGAGCAGGAAGAGCAGGAGGAGGAGAGGCGTTCCCAGAGGCAGGCCAGGCAGCGGGACCTCCGGGACCTGGCCTCCGCCCGGGAGCAGGCCTCCGCCCGGGACCAGGCCTCCGCCCGGGACCAGGCATCCGCCCGGGACCAGGCCTCCGCCCGGGACCAGGCCTCCGCCCGGGACCAGGCCTCCGCCCGGGACCAGGCCTCCGCCCGGGACCAGGCCTCCGCCCGGGACCAGGCCTCCGCCCGGGACCAGGCATCCGCCCGGGACCAGGCATCCGCCCGGGTGCAGGAGCAGCATCTGGCTGCGGAGGTGGAGGCTCTGAGGTCCCGGGAGGCGCGGCACAAGGAGAAGGTCCGGGAGCTGGAGACGGCTCTCCACAAGGCATCCGCCCGGGACCAGGCATCCGCCCGGGACCAGGCATCCGCCCGGGACCAGGCATCCGCCCGGGTGCAGGAGCAGCATCTGGCTGCGGAGGTGGAGGCTCTGAGGTCCCGGGAGGCGCGGCACAAGGAGAAGGTCCGGGAGCTGGAGACGGCTCTCCACAAGATGTCTGAACGTTTAGCGAGCAGCCAGGACCTCCTCCAGCTCCAGGCCCAGGAGTCTGCTCGGTTGGAACTACGGCACGTCCTGGACCTGAAGCACCCTTCCTGGCTCCACGCCCTGGAGATCAAGGACAGCCACGCTGGGCAGGAGCATCCCTCTCTCGCCCGGGCCCTGCTGCATGGTGTGATGTCAGAGAAGTCCCGACCGGGAGCCCCACCGCAGCGGCCCGTGTCCCCCGGCAGGGAGCCTCCGACGAGGCCGAGGTCTGGGGCGGGACGGGGGCCCGGGGCCACACCACCGTCGCCCGTCCACTCCCTCTTGACCTCTGACCCCCGGAACAAAGCTGCCGTCTGGAAGGCTCGAGGAGGAGGAGGAGGCCGCCGCCCACATCAGCGATACCCGAGAAATCTCTTCGGTCATTCGGGGTTACAGAGACAAGACGTCTCCTAA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15921	CCDC158	Coiled-coil domain-containing protein 158	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031809	Family	Coiled-coil domain-containing protein 158	Interproscan
IPR040373	Family	Transcription factor castor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12451	TRANSCRIPTION FACTOR CASTOR PROTEIN MING -RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0045664	Biological Process	regulation of neuron differentiation	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-