Detailed information of KAG7276632.1 in Coryphaenoides rupestris Gene info
Gene IDAnnotationScaffoldStartEndStrand
KAG7276632.1NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2PIJE02000179.1239357427410-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00378ECH_1Enoyl-CoA hydratase/isomeraseDomainInterproscan
PF02854MIF4GMIF4G domainRepeatInterproscan
PF04050Upf2Up-frameshift suppressor 2 RepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001753FamilyEnoyl-CoA hydratase/isomeraseInterproscan
IPR003890DomainMIF4G-like, type 3Interproscan
IPR007193DomainUp-frameshift suppressor 2, C-terminalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR029045Homologous_superfamilyClpP/crotonase-like domain superfamilyInterproscan
IPR039762FamilyNonsense-mediated mRNA decay protein Nmd2/UPF2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR12839NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005844Cellular Componentobsolete polysomeInterproscan
GO:0035145Cellular Componentexon-exon junction complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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