| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| KAG7273928.1 | DEADENYLATION COMPLEX SUBUNIT PAN3 | PIJE02000287.1 | 221522 | 235173 | + |
| CDS | |||||
| KAG7273928.1 | |||||
| Transcript |
| - |
| Protein |
| KAG7273928.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF17988 | VEGFR-2_TMD | VEGFR-2 Transmembrane domain | Domain | Interproscan |
| PF18101 | Pan3_PK | Pan3 Pseudokinase domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000719 | Domain | Protein kinase domain | Interproscan |
| IPR001824 | Conserved_site | Tyrosine-protein kinase, receptor class III, conserved site | Interproscan |
| IPR011009 | Homologous_superfamily | Protein kinase-like domain superfamily | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR017441 | Binding_site | Protein kinase, ATP binding site | Interproscan |
| IPR020635 | Domain | Tyrosine-protein kinase, catalytic domain | Interproscan |
| IPR030844 | Family | PAN2-PAN3 deadenylation complex subunit PAN3 | Interproscan |
| IPR041332 | Domain | Pan3 pseudokinase domain | Interproscan |
| IPR041348 | Domain | VEGFR-2, transmembrane domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12272 | DEADENYLATION COMPLEX SUBUNIT PAN3 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000289 | Biological Process | nuclear-transcribed mRNA poly(A) tail shortening | Interproscan |
| GO:0000932 | Cellular Component | P-body | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0004672 | Molecular Function | protein kinase activity | Interproscan |
| GO:0004713 | Molecular Function | protein tyrosine kinase activity | Interproscan |
| GO:0004714 | Molecular Function | transmembrane receptor protein tyrosine kinase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0006397 | Biological Process | mRNA processing | Interproscan |
| GO:0006468 | Biological Process | protein phosphorylation | Interproscan |
| GO:0007169 | Biological Process | cell surface receptor protein tyrosine kinase signaling pathway | Interproscan |
| GO:0008143 | Molecular Function | poly(A) binding | Interproscan |
| GO:0031251 | Cellular Component | PAN complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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