Gene detail

Detailed information of KAG7257762.1 in Coryphaenoides rupestris Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAG7257762.1	DNA2/NAM7 HELICASE FAMILY	PIJE02002383.1	33235	69878	+

Gene Structure

More details in Jbrowse Sequence

CDS

KAG7257762.1

ATGGCCAAGCAACCACTTTCCAAAAAGGTCGCAGCCCCATCAGTGTCTCAGATAAATGCTGAATATGTCACACAGCTGGCCAATAAATATTGGGCTCCCCATGCTAAGAACAAACTAGCCTTTGACCCCAAGGTGCTGGAAGATGTTTATGAAAAGGAGATTCTCAGTTCGAATCAGTATCTCGAGAACTACTTGTGGGTCAACTACTCACCCAAGGTGTCCAGCAACGCCTATCTGATGTCCATCTGTTGCATCGTCAACGAGAAATTCAGAGAAAATGTCCCCGCCTGGGAGCCATTCAAGAAGAACCCGGGCCACTTCCCCTTCTTCTTCCAGTGTGTGATGAAGGCATCGAGACTTCAGCAGGAGCTGAAGAAAGTCCCGAAGCTGCAGAAGTTCTGGAATCTAATCAAGAAGAAATACGATAAGATGGACGCCGACGCAGCAGAGCAGGCCACGAAGGAACGGACATTCCTCTCATCGCTGATTGACCAATTCCTCGTCCACTACTGCGAGAGGTTCATCGAGCTCATGATCGACCTGGAGGCCCTGCTGCCCACCAGGCGCTGGTTCAACACCGTGCTGGACAACGCCCACCTCGTGGTCAGCTGCCACCTGTCCGACCTCATCAAGCGCGAGAAGGAGGGACACCTCTTCTCTCAGCTGTTGGACATGCTGAAGTTCTACACGGGCTTCGAGATCAATGACCAGACAGGAAACGCGCTGACGCAGAAAGAGATGACCACTTTGCACTATGATAGAATCACTTCCCTTCAGAGGTCGGCCTTCGCCCATTTCCCCGAGCTCCTGGACTTTGCCCTGTCCAACGTGGCGGCGGTGGACACCCGGGAGTCTCTGACCAAACAGTTTGGACAGCTCAGTCCCAACACCCTCCACCGGGTGGCCTCGTACCTGTGTCTGCTGCCGGAGCTGCCGGAAGGGCAGGACACCGCCTTTGAGATGACTGTTCTCCTTGAGCTGCTGGTCTCCCGTCACGAGCGCAGGATCTCTCAGATCGAGCAACTCAACCAGATGCCTCTTTATCCAACGGAGAAGATAATCTGGGATGAGAACATCGTCCCCACAGAGTACTACTCTGGCGAAGGTTGCCTGGCCCTGCCCAAGCTGAATCTCCAGTTCCTGACCCTCCACGACTACCTGCTGAGGAACTTCAACCTCTTCCGCCTGGAGTCCACCTACGAGATCCGGCAGGACATTGAGGACGTGGTGGCCCGCATGAAGCCATGGCAGTCAGAGTACGGGGGCGTGGTGTTCGGCGGCTGGGCCCGCATGGCCCAGACCATCACGGCCTTCTCCATCGTGGAGGTGGCCAAGCCCAACATCGGGGAGAACTGGCCGGCCCGCGTCCGCGCCGACGTCACCATCAACCTCAACTCCTTCGTGGAGCAGGCGGGCCTGGTTTACGTGCGTGGCTGCGAGGTGCAGGGCATGCTGGACGACAAAGGGCGTGTCATCGAGGAAGGACCCGATCCCAAGCCCAAGCTCCGGGGCGACTCGAGGACCTACCGCGTGTGGCTGGACTCCAACCAGTACCAGCAGGACATGACCAGCAGCATCCAGAACCGCACCGAGGACCCCTACGAGTCCTTCAACATCATCATGAGACGCAAACCCAAAGAGAACAACTTCAAGGCGGTGCTGGAGACCATCCGGAACCTGATGAACACGGAGTGCGTGGTGCCCGACTGGCTCCACGACATCATCCTGGGCTACGGCGACCAGGGCAGCGCCCACTACTCCAAGATGCCCAATCAGATCTCCTCGCTGGACTTCAACGACACCTTCCTGTCCCTGGACCACCTGCGGTCCTGCTTCCCCGGCTACGCAGTCAAGGTCACCGAGGACGACACCGCGCTGCAGGTTCCCCCGTTCAGAATCACGTTCCCGGTGCCTAAAAGAGAAGACAAAGGCAAGAAAAGGAAGGCGGGCGATGAAGAGGAGGAGGAGGAGGAGGACTCGCCGGCCGAGCAGACGCTAGTGGTCGAGCCCCACGTTCCCGTCAACCGCGGGCCCTATCCCTACAACCAGCCCAAACGGAACACCATTCAGTTCACCCCGACTCAGATCGAGGCTATCCGGGCCGGGATGCAGCCAGGACTAACCATGGTGGTGGGTCCACCCGGCACGGGAAAGACGGACGTGGCGGTCCAGATCATTTCCAACCTCTACCACAACTTCCCCGAGCAGAGGACCCTCATTGTCACACACTCTAACCAGCTGTTTGAGAAGATCATAGCGCTGGACATCGACGAGCGCCACCTCCTGCGTCTGGGCCACGGCGAGGAGGCGCTGGAGACGGAGAAGGACTTCAGCAGAGCCATGAGAGACTTGCAAAATAGAGACTTGCATACCACAGCGCTTGCGGAATATACAGCGTATTACATGAGCAAGGTGCGGCCCAAGCAGGGCAAGCCGGTGGAGGCGGAGGCGGTGGCGGCCCACTTCCCCTTCCAGCAGTACTTCTCCAACGCGCCGCAGCCC

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13086	AAA_11	AAA domain	Domain	Interproscan
PF16399	Aquarius_N_1st	Intron-binding protein aquarius N-terminal	Repeat	Interproscan
PF21143	Aquarius_N_2nd	Intron-binding protein aquarius, beta-barrel	Domain	Interproscan
PF21144	Aquarius_N_3rd	Intron-binding protein aquarius insert domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032174	Domain	RNA helicase aquarius, N-terminal domain	Interproscan
IPR041677	Domain	DNA2/NAM7 helicase, helicase domain	Interproscan
IPR045055	Family	DNA2/NAM7-like helicase	Interproscan
IPR048966	Domain	RNA helicase aquarius, beta-barrel	Interproscan
IPR048967	Domain	RNA helicase aquarius, insertion domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10887	DNA2/NAM7 HELICASE FAMILY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0004386	Molecular Function	helicase activity	Interproscan
GO:0071013	Cellular Component	catalytic step 2 spliceosome	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-